Literature DB >> 24212889

The family Parvoviridae.

Susan F Cotmore1, Mavis Agbandje-McKenna, John A Chiorini, Dmitry V Mukha, David J Pintel, Jianming Qiu, Maria Soderlund-Venermo, Peter Tattersall, Peter Tijssen, Derek Gatherer, Andrew J Davison.   

Abstract

A set of proposals to rationalize and extend the taxonomy of the family Parvoviridae is currently under review by the International Committee on Taxonomy of Viruses (ICTV). Viruses in this family infect a wide range of hosts, as reflected by the longstanding division into two subfamilies: the Parvovirinae, which contains viruses that infect vertebrate hosts, and the Densovirinae, encompassing viruses that infect arthropod hosts. Using a modified definition for classification into the family that no longer demands isolation as long as the biological context is strong, but does require a near-complete DNA sequence, 134 new viruses and virus variants were identified. The proposals introduce new species and genera into both subfamilies, resolve one misclassified species, and improve taxonomic clarity by employing a series of systematic changes. These include identifying a precise level of sequence similarity required for viruses to belong to the same genus and decreasing the level of sequence similarity required for viruses to belong to the same species. These steps will facilitate recognition of the major phylogenetic branches within genera and eliminate the confusion caused by the near-identity of species and viruses. Changes to taxon nomenclature will establish numbered, non-Latinized binomial names for species, indicating genus affiliation and host range rather than recapitulating virus names. Also, affixes will be included in the names of genera to clarify subfamily affiliation and reduce the ambiguity that results from the vernacular use of "parvovirus" and "densovirus" to denote multiple taxon levels.

Entities:  

Mesh:

Year:  2013        PMID: 24212889      PMCID: PMC4013247          DOI: 10.1007/s00705-013-1914-1

Source DB:  PubMed          Journal:  Arch Virol        ISSN: 0304-8608            Impact factor:   2.574


  13 in total

1.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

Review 2.  Parvovirus diversity and DNA damage responses.

Authors:  Susan F Cotmore; Peter Tattersall
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-02-01       Impact factor: 10.005

3.  Metagenomic analysis of viruses from bat fecal samples reveals many novel viruses in insectivorous bats in China.

Authors:  Xingyi Ge; Yan Li; Xinglou Yang; Huajun Zhang; Peng Zhou; Yunzhi Zhang; Zhengli Shi
Journal:  J Virol       Date:  2012-02-15       Impact factor: 5.103

4.  Parvoviral left-end hairpin ears are essential during infection for establishing a functional intranuclear transcription template and for efficient progeny genome encapsidation.

Authors:  Lei Li; Susan F Cotmore; Peter Tattersall
Journal:  J Virol       Date:  2013-07-31       Impact factor: 5.103

5.  A proposal to change existing virus species names to non-Latinized binomials.

Authors:  Marc H V Van Regenmortel; Donald S Burke; Charles H Calisher; Ralf G Dietzgen; Claude M Fauquet; Said A Ghabrial; Peter B Jahrling; Karl M Johnson; Michael R Holbrook; Marian C Horzinek; Günther M Keil; Jens H Kuhn; Brian W J Mahy; Giovanni P Martelli; Craig Pringle; Edward P Rybicki; Tim Skern; Robert B Tesh; Victoria Wahl-Jensen; Peter J Walker; Scott C Weaver
Journal:  Arch Virol       Date:  2010-10-16       Impact factor: 2.574

6.  Discovery and characterization of mammalian endogenous parvoviruses.

Authors:  Amit Kapoor; Peter Simmonds; W Ian Lipkin
Journal:  J Virol       Date:  2010-10-13       Impact factor: 5.103

7.  Accelerated Profile HMM Searches.

Authors:  Sean R Eddy
Journal:  PLoS Comput Biol       Date:  2011-10-20       Impact factor: 4.475

8.  Relaxed phylogenetics and dating with confidence.

Authors:  Alexei J Drummond; Simon Y W Ho; Matthew J Phillips; Andrew Rambaut
Journal:  PLoS Biol       Date:  2006-03-14       Impact factor: 8.029

9.  Establishment of a reverse genetics system for studying human bocavirus in human airway epithelia.

Authors:  Qinfeng Huang; Xuefeng Deng; Ziying Yan; Fang Cheng; Yong Luo; Weiran Shen; Diana C M Lei-Butters; Aaron Yun Chen; Yi Li; Liang Tang; Maria Söderlund-Venermo; John F Engelhardt; Jianming Qiu
Journal:  PLoS Pathog       Date:  2012-08-30       Impact factor: 6.823

Review 10.  Emerging issues in virus taxonomy.

Authors:  Marc H V van Regenmortel; Brian W J Mahy
Journal:  Emerg Infect Dis       Date:  2004-01       Impact factor: 6.883

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  236 in total

1.  Development of a reverse genetics system for a feline panleukopenia virus.

Authors:  Nan Cheng; Yongkun Zhao; Qiuxue Han; Weijiao Zhang; Ji Xi; Yongle Yu; Hualei Wang; Guohua Li; Yuwei Gao; Songtao Yang; Weiquan Liu; Xianzhu Xia
Journal:  Virus Genes       Date:  2018-12-05       Impact factor: 2.332

2.  Establishment of a High-Yield Recombinant Adeno-Associated Virus/Human Bocavirus Vector Production System Independent of Bocavirus Nonstructural Proteins.

Authors:  Ziying Yan; Wei Zou; Zehua Feng; Weiran Shen; Soo Yeun Park; Xuefeng Deng; Jianming Qiu; John F Engelhardt
Journal:  Hum Gene Ther       Date:  2019-01-31       Impact factor: 5.695

3.  Examination and Reconstruction of Three Ancient Endogenous Parvovirus Capsid Protein Gene Remnants Found in Rodent Genomes.

Authors:  Heather M Callaway; Suriyasri Subramanian; Christian A Urbina; Karen N Barnard; Robert A Dick; Carol M Bator; Susan L Hafenstein; Robert J Gifford; Colin R Parrish
Journal:  J Virol       Date:  2019-03-05       Impact factor: 5.103

4.  Nonstructural Protein NP1 of Human Bocavirus 1 Plays a Critical Role in the Expression of Viral Capsid Proteins.

Authors:  Wei Zou; Fang Cheng; Weiran Shen; John F Engelhardt; Ziying Yan; Jianming Qiu
Journal:  J Virol       Date:  2016-04-14       Impact factor: 5.103

5.  Evaluation of the serum virome in calves persistently infected with Pestivirus A, presenting or not presenting mucosal disease.

Authors:  Matheus N Weber; Samuel P Cibulski; Simone Silveira; Franciele M Siqueira; Ana Cristina S Mósena; Mariana S da Silva; Juliana C Olegário; Ana Paula M Varela; Thaís F Teixeira; Matheus V Bianchi; David Driemeier; Saulo P Pavarini; Fabiana Q Mayer; Paulo M Roehe; Cláudio W Canal
Journal:  Virus Genes       Date:  2018-09-14       Impact factor: 2.332

6.  Exploring the virome of diseased horses.

Authors:  Linlin Li; Federico Giannitti; Jason Low; Casey Keyes; Leila S Ullmann; Xutao Deng; Monica Aleman; Patricia A Pesavento; Nicola Pusterla; Eric Delwart
Journal:  J Gen Virol       Date:  2015-06-04       Impact factor: 3.891

Review 7.  Human Parvovirus B19 and blood product safety: a tale of twenty years of improvements.

Authors:  Giuseppe Marano; Stefania Vaglio; Simonetta Pupella; Giuseppina Facco; Gabriele Calizzani; Fabio Candura; Giancarlo M Liumbruno; Giuliano Grazzini
Journal:  Blood Transfus       Date:  2015-04       Impact factor: 3.443

8.  Carnivore Protoparvovirus 1 at the Wild-Domestic Carnivore Interface in Northwestern Mexico.

Authors:  Andres M López-Pérez; Karen Moreno; Andrea Chaves; Carlos N Ibarra-Cerdeña; Andre Rubio; Janet Foley; Rurik List; Gerardo Suzán; Rosa Elena Sarmiento
Journal:  Ecohealth       Date:  2019-08-02       Impact factor: 3.184

9.  Minute Virus of Canines NP1 Protein Interacts with the Cellular Factor CPSF6 To Regulate Viral Alternative RNA Processing.

Authors:  Yanming Dong; Olufemi O Fasina; David J Pintel
Journal:  J Virol       Date:  2019-01-04       Impact factor: 5.103

10.  The 11-Kilodalton Nonstructural Protein of Human Parvovirus B19 Facilitates Viral DNA Replication by Interacting with Grb2 through Its Proline-Rich Motifs.

Authors:  Peng Xu; Aaron Yun Chen; Safder S Ganaie; Fang Cheng; Weiran Shen; Xiaomei Wang; Steve Kleiboeker; Yi Li; Jianming Qiu
Journal:  J Virol       Date:  2018-12-10       Impact factor: 5.103

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