Literature DB >> 24209615

The frustrated gene: origins of eukaryotic gene expression.

Hiten D Madhani1.   

Abstract

Eukarytotic gene expression is frustrated by a series of steps that are generally not observed in prokaryotes and are therefore not essential for the basic chemistry of transcription and translation. Their evolution may have been driven by the need to defend against parasitic nucleic acids.
Copyright © 2013 Elsevier Inc. All rights reserved.

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Year:  2013        PMID: 24209615      PMCID: PMC4163148          DOI: 10.1016/j.cell.2013.10.003

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  40 in total

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4.  Excised group II introns in yeast mitochondria are lariats and can be formed by self-splicing in vitro.

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Review 5.  EJCs at the heart of translational control.

Authors:  Hervé Le Hir; Bertrand Séraphin
Journal:  Cell       Date:  2008-04-18       Impact factor: 41.582

6.  Gammaretroviral integration into nucleosomal target DNA in vivo.

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Journal:  J Virol       Date:  2011-05-11       Impact factor: 5.103

7.  Stalled spliceosomes are a signal for RNAi-mediated genome defense.

Authors:  Phillip A Dumesic; Prashanthi Natarajan; Changbin Chen; Ines A Drinnenberg; Benjamin J Schiller; James Thompson; James J Moresco; John R Yates; David P Bartel; Hiten D Madhani
Journal:  Cell       Date:  2013-02-14       Impact factor: 41.582

8.  Loss of nucleosomal DNA condensation coincides with appearance of a novel nuclear protein in dinoflagellates.

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Review 9.  RNA degradation in Saccharomyces cerevisae.

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Journal:  Genetics       Date:  2012-07       Impact factor: 4.562

Review 10.  Comparative genomics of defense systems in archaea and bacteria.

Authors:  Kira S Makarova; Yuri I Wolf; Eugene V Koonin
Journal:  Nucleic Acids Res       Date:  2013-03-06       Impact factor: 16.971

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  17 in total

1.  Quantitative global studies reveal differential translational control by start codon context across the fungal kingdom.

Authors:  Edward W J Wallace; Corinne Maufrais; Jade Sales-Lee; Laura R Tuck; Luciana de Oliveira; Frank Feuerbach; Frédérique Moyrand; Prashanthi Natarajan; Hiten D Madhani; Guilhem Janbon
Journal:  Nucleic Acids Res       Date:  2020-03-18       Impact factor: 16.971

2.  HERV-K HML-2 diversity among humans.

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Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-08       Impact factor: 11.205

3.  The RNA Exosome Syncs IAV-RNAPII Transcription to Promote Viral Ribogenesis and Infectivity.

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Journal:  Cell       Date:  2017-05-04       Impact factor: 41.582

Review 4.  Soma-to-germline RNA communication.

Authors:  Colin C Conine; Oliver J Rando
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Review 5.  Recognizing the enemy within: licensing RNA-guided genome defense.

Authors:  Phillip A Dumesic; Hiten D Madhani
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Review 6.  Retroelement origins of pre-mRNA splicing.

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Journal:  Wiley Interdiscip Rev RNA       Date:  2020-02-11       Impact factor: 9.957

Review 7.  Old cogs, new tricks: the evolution of gene expression in a chromatin context.

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Review 8.  The Mediator complex: a central integrator of transcription.

Authors:  Benjamin L Allen; Dylan J Taatjes
Journal:  Nat Rev Mol Cell Biol       Date:  2015-02-18       Impact factor: 94.444

Review 9.  Noncoding RNA and its associated proteins as regulatory elements of the immune system.

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Review 10.  Coaching from the sidelines: the nuclear periphery in genome regulation.

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