Literature DB >> 24193791

Rapid estimation of genetic relatedness among heterogeneous populations of alfalfa by random amplification of bulked genomic DNA samples.

K Yu1, K P Pauls.   

Abstract

A procedure which involves the use of RAPD markers, obtained from bulked genomic DNA samples, to estimate genetic relatedness among heterogeneous populations is demonstrated in this study. Bulked samples of genomic DNA from several alfalfa plants per population were used as templates in polymerase chain reactions with different random primers to produce RAPD patterns. The results show that the RAPD patterns can be used to determine genetic distances among heterogeneous populations and cultivars which correspond to their known relatedness. The results also indicate that, by using ten primers with bulked DNA samples from ten individuals, 18-72 populations or cultivars can be distinguished from each other on the basis of at least one unique RAPD marker. We anticipate that DNA bulking and methods for comparing RAPD patterns will be very useful for identifying cultivars, for studying phylogenetic relationships among heterogeneous populations and for selecting parents to maximize heterosis in crosses.

Year:  1993        PMID: 24193791     DOI: 10.1007/BF00222671

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  11 in total

1.  DNA amplification fingerprinting using very short arbitrary oligonucleotide primers.

Authors:  G Caetano-Anollés; B J Bassam; P M Gresshoff
Journal:  Biotechnology (N Y)       Date:  1991-06

2.  Identification of markers linked to disease-resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations.

Authors:  R W Michelmore; I Paran; R V Kesseli
Journal:  Proc Natl Acad Sci U S A       Date:  1991-11-01       Impact factor: 11.205

3.  Rapid identification of genetic variation and pathotype of Leptosphaeria maculans by random amplified polymorphic DNA assay.

Authors:  P H Goodwin; S L Annis
Journal:  Appl Environ Microbiol       Date:  1991-09       Impact factor: 4.792

4.  Genetic polymorphism in varietal identification and genetic improvement.

Authors:  M Soller; J S Beckmann
Journal:  Theor Appl Genet       Date:  1983-11       Impact factor: 5.699

5.  DNA fingerprinting: a tool for determining genetic distances between strains of poultry.

Authors:  U Kuhnlein; Y Dawe; D Zadworny; J S Gavora
Journal:  Theor Appl Genet       Date:  1989-05       Impact factor: 5.699

6.  DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

7.  Rapid identification of markers linked to a Pseudomonas resistance gene in tomato by using random primers and near-isogenic lines.

Authors:  G B Martin; J G Williams; S D Tanksley
Journal:  Proc Natl Acad Sci U S A       Date:  1991-03-15       Impact factor: 11.205

8.  Fingerprinting genomes using PCR with arbitrary primers.

Authors:  J Welsh; M McClelland
Journal:  Nucleic Acids Res       Date:  1990-12-25       Impact factor: 16.971

9.  Use of single-primer DNA amplifications in genetic studies of peanut (Arachis hypogaea L.).

Authors:  T Halward; T Stalker; E LaRue; G Kochert
Journal:  Plant Mol Biol       Date:  1992-01       Impact factor: 4.076

10.  Similarities among a group of elite maize inbreds as measured by pedigree, F1 grain yield, grain yield, heterosis, and RFLPs.

Authors:  O S Smith; J S Smith; S L Bowen; R A Tenborg; S J Wall
Journal:  Theor Appl Genet       Date:  1990-12       Impact factor: 5.699

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  9 in total

1.  Can the spread of agriculture in Europe be followed by tracing the spread of the weed Silene latifolia. A RAPD study.

Authors:  P Vellekoop; J B Buntjer; J W Maas; J van Brederode
Journal:  Theor Appl Genet       Date:  1996-06       Impact factor: 5.699

2.  RAPD and organelle specific PCR re-affirms taxonomic relationships within the genus Coffea.

Authors:  C Orozco-Castillo; K J Chalmers; W Powell; R Waugh
Journal:  Plant Cell Rep       Date:  1996-01       Impact factor: 4.570

3.  Allozyme, chloroplast DNA and RAPD markers for determining genetic relationships between Abies alba and the relic population of Abies nebrodensis.

Authors:  F Vicario; G G Vendramin; P Rossi; P Liò; R Giannini
Journal:  Theor Appl Genet       Date:  1995-06       Impact factor: 5.699

4.  RAPD fingerprinting of blackcurrant (Ribes nigrum L.) cultivars.

Authors:  P G Lanham; R M Brennan; C Hackett; R J McNicol
Journal:  Theor Appl Genet       Date:  1995-02       Impact factor: 5.699

5.  Swiss Mattenklee landraces, a distinct and diverse genetic resource of red clover (Trifolium pratense L.).

Authors:  R Kölliker; D Herrmann; B Boller; F Widmer
Journal:  Theor Appl Genet       Date:  2003-03-25       Impact factor: 5.699

6.  Genetic diversity evaluation of some elite cotton varieties by RAPD analysis.

Authors:  M J Iqbal; N Aziz; N A Saeed; Y Zafar; K A Malik
Journal:  Theor Appl Genet       Date:  1997-01       Impact factor: 5.699

7.  First RFLP linkage map of red clover ( Trifolium pratense L.) based on cDNA probes and its transferability to other red clover germplasm.

Authors:  S Isobe; I Klimenko; S Ivashuta; M Gau; N N Kozlov
Journal:  Theor Appl Genet       Date:  2003-09-16       Impact factor: 5.699

8.  Insight into the genetic variability analysis and cultivar identification of tall fescue by using SSR markers.

Authors:  Kaixin Fu; Zhihui Guo; Xinquan Zhang; Yan Fan; Wendan Wu; Daxu Li; Yan Peng; Linkai Huang; Ming Sun; Shiqie Bai; Xiao Ma
Journal:  Hereditas       Date:  2016-08-11       Impact factor: 3.271

9.  Genetic variability evaluation and cultivar identification of tetraploid annual ryegrass using SSR markers.

Authors:  Gang Nie; Ting Huang; Xiao Ma; Linkai Huang; Yan Peng; Yanhong Yan; Zhou Li; Xia Wang; Xinquan Zhang
Journal:  PeerJ       Date:  2019-09-20       Impact factor: 2.984

  9 in total

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