Literature DB >> 24192514

Building an open-source robotic stereotaxic instrument.

Kevin R Coffey1, David J Barker, Sisi Ma, Mark O West.   

Abstract

This protocol includes the designs and software necessary to upgrade an existing stereotaxic instrument to a robotic (CNC) stereotaxic instrument for around $1,000 (excluding a drill), using industry standard stepper motors and CNC controlling software. Each axis has variable speed control and may be operated simultaneously or independently. The robot's flexibility and open coding system (g-code) make it capable of performing custom tasks that are not supported by commercial systems. Its applications include, but are not limited to, drilling holes, sharp edge craniotomies, skull thinning, and lowering electrodes or cannula. In order to expedite the writing of g-coding for simple surgeries, we have developed custom scripts that allow individuals to design a surgery with no knowledge of programming. However, for users to get the most out of the motorized stereotax, it would be beneficial to be knowledgeable in mathematical programming and G-Coding (simple programming for CNC machining). The recommended drill speed is greater than 40,000 rpm. The stepper motor resolution is 1.8°/Step, geared to 0.346°/Step. A standard stereotax has a resolution of 2.88 μm/step. The maximum recommended cutting speed is 500 μm/sec. The maximum recommended jogging speed is 3,500 μm/sec. The maximum recommended drill bit size is HP 2.

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Year:  2013        PMID: 24192514      PMCID: PMC3965336          DOI: 10.3791/51006

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  11 in total

1.  Lesions of dorsolateral striatum preserve outcome expectancy but disrupt habit formation in instrumental learning.

Authors:  Henry H Yin; Barbara J Knowlton; Bernard W Balleine
Journal:  Eur J Neurosci       Date:  2004-01       Impact factor: 3.386

2.  A guide to the new ARENA/OLAW IACUC guidebook.

Authors:  Marky Pitts
Journal:  Lab Anim (NY)       Date:  2002-10       Impact factor: 12.625

3.  Differential roles of ventral pallidum subregions during cocaine self-administration behaviors.

Authors:  David H Root; Sisi Ma; David J Barker; Laura Megehee; Brendan M Striano; Carla M Ralston; Anthony T Fabbricatore; Mark O West
Journal:  J Comp Neurol       Date:  2013-02-15       Impact factor: 3.215

4.  Responsiveness to nicotine of neurons of the caudal nucleus of the solitary tract correlates with the neuronal projection target.

Authors:  Lin Feng; Evgeny A Sametsky; Alexander G Gusev; Victor V Uteshev
Journal:  J Neurophysiol       Date:  2012-07-18       Impact factor: 2.714

5.  Phasic firing of single neurons in the rat nucleus accumbens correlated with the timing of intravenous cocaine self-administration.

Authors:  L L Peoples; M O West
Journal:  J Neurosci       Date:  1996-05-15       Impact factor: 6.167

6.  Thinned-skull cranial window technique for long-term imaging of the cortex in live mice.

Authors:  Guang Yang; Feng Pan; Christopher N Parkhurst; Jaime Grutzendler; Wen-Biao Gan
Journal:  Nat Protoc       Date:  2010-01-14       Impact factor: 13.491

7.  In vivo imaging of neuronal activity by targeted expression of a genetically encoded probe in the mouse.

Authors:  Thomas Bozza; John P McGann; Peter Mombaerts; Matt Wachowiak
Journal:  Neuron       Date:  2004-04-08       Impact factor: 17.173

8.  Activation of single neurons in the rat nucleus accumbens during self-stimulation of the ventral tegmental area.

Authors:  M Wolske; P P Rompre; R A Wise; M O West
Journal:  J Neurosci       Date:  1993-01       Impact factor: 6.167

9.  A technique for microiontophoretic study of single neurons in the freely moving rat.

Authors:  M O West; D J Woodward
Journal:  J Neurosci Methods       Date:  1984-08       Impact factor: 2.390

10.  Transplanted bone marrow mesenchymal stem cells improve memory in rat models of Alzheimer's disease.

Authors:  Parvin Babaei; Bahram Soltani Tehrani; Arsalan Alizadeh
Journal:  Stem Cells Int       Date:  2012-06-14       Impact factor: 5.443

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  9 in total

Review 1.  Through the looking glass: A review of cranial window technology for optical access to the brain.

Authors:  Samuel W Cramer; Russell E Carter; Justin D Aronson; Suhasa B Kodandaramaiah; Timothy J Ebner; Clark C Chen
Journal:  J Neurosci Methods       Date:  2021-02-15       Impact factor: 2.390

2.  Representation of the body in the lateral striatum of the freely moving rat: Fast Spiking Interneurons respond to stimulation of individual body parts.

Authors:  Julianna M Kulik; Anthony P Pawlak; Manraj Kalkat; Kevin R Coffey; Mark O West
Journal:  Brain Res       Date:  2016-11-30       Impact factor: 3.252

3.  PACAP-expressing neurons in the lateral habenula diminish negative emotional valence.

Authors:  Marjorie R Levinstein; David J Bergkamp; Zoë K Lewis; Alex Tsobanoudis; Koichi Hashikawa; Garret D Stuber; John F Neumaier
Journal:  Genes Brain Behav       Date:  2022-03-18       Impact factor: 3.708

Review 4.  Assessing rodent hippocampal involvement in the novel object recognition task. A review.

Authors:  Sarah J Cohen; Robert W Stackman
Journal:  Behav Brain Res       Date:  2014-08-26       Impact factor: 3.332

5.  Single body parts are processed by individual neurons in the mouse dorsolateral striatum.

Authors:  Kevin R Coffey; Miles Nader; Mark O West
Journal:  Brain Res       Date:  2016-01-28       Impact factor: 3.252

6.  Electrophysiological evidence of alterations to the nucleus accumbens and dorsolateral striatum during chronic cocaine self-administration.

Authors:  Kevin R Coffey; David J Barker; Nick Gayliard; Julianna M Kulik; Anthony P Pawlak; Joshua P Stamos; Mark O West
Journal:  Eur J Neurosci       Date:  2015-05-08       Impact factor: 3.386

7.  Homogeneous processing in the striatal direct and indirect pathways: single body part sensitive type IIb neurons may express either dopamine receptor D1 or D2.

Authors:  Kevin R Coffey; Miles Nader; Jasmeet Bawa; Mark O West
Journal:  Eur J Neurosci       Date:  2017-10-04       Impact factor: 3.386

8.  An open-source automated surgical instrument for microendoscope implantation.

Authors:  Bo Liang; Lifeng Zhang; Casey Moffitt; Yun Li; Da-Ting Lin
Journal:  J Neurosci Methods       Date:  2018-10-13       Impact factor: 2.987

9.  Stress induces divergent gene expression among lateral habenula efferent pathways.

Authors:  Marjorie R Levinstein; Kevin R Coffey; Russell G Marx; Atom J Lesiak; John F Neumaier
Journal:  Neurobiol Stress       Date:  2020-11-16
  9 in total

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