Literature DB >> 24192355

Crystallization and preliminary X-ray study of alanine dehydrogenase from Bacillus pseudofirmus OF4.

Jinjin Wen1, Zhenzhen Li, Guangzheng He, Shujing Xu, Baohua Zhao, Xianming Zhu, Hui Dong, Jiansong Ju.   

Abstract

Alanine dehydrogenase (OF4Ald) from the alkaliphilic Bacillus pseudofirmus OF4 was expressed and purified with a His6 tag in a form suitable for X-ray crystallographic analysis. Crystals were grown by the hanging-drop vapour-diffusion method at 289 K using a solution consisting of 0.1 M Tris-HCl pH 8.0, 0.2 M LiSO4, 22%(w/v) PEG 3350. X-ray diffraction data were collected to 2.8 Å resolution. The crystal belonged to the triclinic space group P1, with unit-cell parameters a = 88.04, b = 105.59, c = 120.53 Å, α = 88.37, β = 78.77, γ = 82.65°.

Entities:  

Keywords:  Bacillus pseudofirmus; alanine dehydrogenase

Mesh:

Substances:

Year:  2013        PMID: 24192355      PMCID: PMC3818039          DOI: 10.1107/S1744309113025426

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  16 in total

1.  Characterization of endogenous pyridoxal 5'-phosphate-dependent alanine racemase from Bacillus pseudofirmus OF4.

Authors:  Jiansong Ju; Shujing Xu; Jianxin Wen; Gang Li; Kouhei Ohnishi; Yanfen Xue; Yanhe Ma
Journal:  J Biosci Bioeng       Date:  2009-03       Impact factor: 2.894

2.  Reidentification of facultatively alkaliphilic Bacillus firmus OF4 as Bacillus pseudofirmus OF4.

Authors:  H Takami; T A Krulwich
Journal:  Extremophiles       Date:  2000-02       Impact factor: 2.395

3.  Structure and function of a 40,000-molecular-weight protein antigen of Mycobacterium tuberculosis.

Authors:  A B Andersen; P Andersen; L Ljungqvist
Journal:  Infect Immun       Date:  1992-06       Impact factor: 3.441

4.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

5.  Thermostable alanine dehydrogenase from thermophilic Bacillus sphaericus DSM 462. Purification, characterization and kinetic mechanism.

Authors:  T Ohshima; M Sakane; T Yamazaki; K Soda
Journal:  Eur J Biochem       Date:  1990-08-17

6.  Alanine dehydrogenase from soybean nodule bacteroids. Kinetic mechanism and pH studies.

Authors:  M T Smith; D W Emerich
Journal:  J Biol Chem       Date:  1993-05-25       Impact factor: 5.157

7.  Structure of alanine dehydrogenase from Archaeoglobus: active site analysis and relation to bacterial cyclodeaminases and mammalian mu crystallin.

Authors:  D T Gallagher; H G Monbouquette; I Schröder; H Robinson; M J Holden; N N Smith
Journal:  J Mol Biol       Date:  2004-09-03       Impact factor: 5.469

8.  Isolation and characterization of new facultatively alkalophilic strains of Bacillus species.

Authors:  A A Guffanti; O Finkelthal; D B Hicks; L Falk; A Sidhu; A Garro; T A Krulwich
Journal:  J Bacteriol       Date:  1986-09       Impact factor: 3.490

9.  L-alanine dehydrogenase from Thermus thermophilus.

Authors:  Z Váli; F Kilár; S Lakatos; S A Venyaminov; P Závodszky
Journal:  Biochim Biophys Acta       Date:  1980-09-09

10.  Crystallization and phasing of alanine dehydrogenase from Archaeoglobus fulgidus.

Authors:  Natasha Smith; Martin Mayhew; Howard Robinson; Annie Héroux; David Charlton; Marcia J Holden; D T Gallagher
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2003-11-27
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