Literature DB >> 2418868

Mechanism of bleomycin: evidence for a rate-determining 4'-hydrogen abstraction from poly(dA-dU) associated with the formation of both free base and base propenal.

J C Wu, J W Kozarich, J Stubbe.   

Abstract

When poly(dA-[4'-3H]dU) was degraded by activated bleomycin under a variety of conditions, 50 +/- 10% of the deoxyuridine residues were converted to uracil and uracil propenal, paralleling observations made with DNA. By manipulation of the concentration of O2 in solution, the relative ratio of uracil propenal to uracil could be varied between 0.03 for anaerobic activation and 7.0 for activation at 3 atm of O2. Tritium selection effects on 4'-hydrogen abstraction were also measured under these conditions and found to range from 7.2 to 12.5. These results strongly suggest that the formation of both uracil and uracil propenal is the consequence of a rate-determining 4'-carbon-hydrogen bond cleavage and of an O2-dependent partitioning of the intermediate produced by this cleavage.

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Year:  1985        PMID: 2418868     DOI: 10.1021/bi00347a009

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  15 in total

1.  Effects of hypoxanthine substitution on bleomycin-mediated DNA strand degradation in DNA-RNA hybrids.

Authors:  M Bansal; J Stubbe; J W Kozarich
Journal:  Nucleic Acids Res       Date:  1997-05-01       Impact factor: 16.971

2.  Reactivity of Nucleic Acid Radicals.

Authors:  Marc M Greenberg
Journal:  Adv Phys Org Chem       Date:  2016       Impact factor: 2.833

3.  Mechanistic analyses of site-specific degradation in DNA-RNA hybrids by prototypic DNA cleavers.

Authors:  M Bansal; J S Lee; J Stubbe; J W Kozarich
Journal:  Nucleic Acids Res       Date:  1997-05-01       Impact factor: 16.971

4.  Characterization of bleomycin-mediated cleavage of a hairpin DNA library.

Authors:  Zachary J Segerman; Basab Roy; Sidney M Hecht
Journal:  Biochemistry       Date:  2013-07-22       Impact factor: 3.162

Review 5.  Mechanisms of bleomycin-induced lung damage.

Authors:  J Hay; S Shahzeidi; G Laurent
Journal:  Arch Toxicol       Date:  1991       Impact factor: 5.153

6.  Dynamics of bleomycin interaction with a strongly bound hairpin DNA substrate, and implications for cleavage of the bound DNA.

Authors:  Trevor C Bozeman; Rupesh Nanjunda; Chenhong Tang; Yang Liu; Zachary J Segerman; Paul A Zaleski; W David Wilson; Sidney M Hecht
Journal:  J Am Chem Soc       Date:  2012-10-22       Impact factor: 15.419

7.  Peroxo and oxo intermediates in mononuclear nonheme iron enzymes and related active sites.

Authors:  Edward I Solomon; Shaun D Wong; Lei V Liu; Andrea Decker; Marina S Chow
Journal:  Curr Opin Chem Biol       Date:  2009-03-09       Impact factor: 8.822

8.  Bleomycin mediated degradation of DNA-RNA hybrids does not involve C-1' chemistry.

Authors:  M J Absalon; C R Krishnamoorthy; G McGall; J W Kozarich; J Stubbe
Journal:  Nucleic Acids Res       Date:  1992-08-25       Impact factor: 16.971

9.  Crystal structure of DNA-bound Co(III) bleomycin B2: Insights on intercalation and minor groove binding.

Authors:  Kristie D Goodwin; Mark A Lewis; Eric C Long; Millie M Georgiadis
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-24       Impact factor: 11.205

10.  Specific binding of o-phenanthroline at a DNA structural lesion.

Authors:  L D Williams; J Thivierge; I H Goldberg
Journal:  Nucleic Acids Res       Date:  1988-12-23       Impact factor: 16.971

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