Literature DB >> 24185983

Evaluation of genetic parameters of 22 autosomal STR loci (PowerPlex® Fusion System) in a population sample from Northern Italy.

Stefania Turrina1, Melissa Ferrian, Stefano Caratti, Domenico De Leo.   

Abstract

The PowerPlex® Fusion System (Promega, Madison, WI) is a short tandem repeat (STR) multiplex that allows co-amplification of 22 autosomal STRs, including the CODIS core and the European Standard Set loci, plus amelogenin for gender determination and DYS391 male specific marker included in order to avoid errors in gender assignment when null Y-alleles or deletions of the Y-chromosome short arm involve the amelogenin locus. Allele frequencies and forensic efficiency parameters were estimated in a population sample of 303 unrelated healthy individuals living in Northern Italy. No significant deviations from Hardy-Weinberg expectations were observed after applying Bonferroni's correction for multiple testing. The combined power of discrimination was 0.999999999999 and the combined power of exclusion was 0.9999956. A rare 28 allele at locus D12S391 was observed, while one tri-allelic pattern at Penta E locus was detected. Population differentiation test revealed significant genetic diversity between our population sample and other European populations considered. The results showed that the PowerPlex® Fusion System is one of the most informative kit available in forensic genetics and may prove useful in both human identification and kinship analysis.

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Year:  2013        PMID: 24185983     DOI: 10.1007/s00414-013-0934-4

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  12 in total

1.  Combining results of forensic STR kits: HDplex validation including allelic association and linkage testing with NGM and Identifiler loci.

Authors:  Antoinette A Westen; Hinda Haned; Laurens J W Grol; Joyce Harteveld; Kristiaan J van der Gaag; Peter de Knijff; Titia Sijen
Journal:  Int J Legal Med       Date:  2012-07-03       Impact factor: 2.686

2.  Allele frequencies of the new European Standard Set (ESS) loci in the Italian population.

Authors:  Andrea Berti; Francesca Brisighelli; Alessandro Bosetti; Elena Pilli; Ciro Trapani; Valentino Tullio; Cristiano Franchi; Giampietro Lago; Cristian Capelli
Journal:  Forensic Sci Int Genet       Date:  2010-02-09       Impact factor: 4.882

3.  Two additional reports of deletion on the short arm of the Y chromosome.

Authors:  Stefania Turrina; Giulia Filippini; Gianfranco Voglino; Domenico De Leo
Journal:  Forensic Sci Int Genet       Date:  2010-11-27       Impact factor: 4.882

4.  A genetic basis for anomalous band patterns encountered during DNA STR profiling.

Authors:  Tim M Clayton; Jennifer L Guest; Andy J Urquhart; Peter D Gill
Journal:  J Forensic Sci       Date:  2004-11       Impact factor: 1.832

5.  The evolution of DNA databases--recommendations for new European STR loci.

Authors:  Peter Gill; Lyn Fereday; Niels Morling; Peter M Schneider
Journal:  Forensic Sci Int       Date:  2005-07-05       Impact factor: 2.395

6.  Allele frequencies of fifteen STRs in a representative sample of the Italian population.

Authors:  F Brisighelli; C Capelli; I Boschi; P Garagnani; M V Lareu; V L Pascali; A Carracedo
Journal:  Forensic Sci Int Genet       Date:  2008-06-20       Impact factor: 4.882

7.  Amplification failure of the amelogenin gene (AMELX) caused by a primer binding site mutation.

Authors:  S Caratti; G Voglino; V Cirigliano; A Ghidini; R Taulli; C Torre; Carlo Robino
Journal:  Prenat Diagn       Date:  2009-12       Impact factor: 3.050

8.  Genetic analysis of the short tandem repeat system D12S391 in the German and three Asian populations.

Authors:  W Waiyawuth; L Zhang; C Rittner; P M Schneider
Journal:  Forensic Sci Int       Date:  1998-06-08       Impact factor: 2.395

9.  The 2011 GeFI collaborative exercise. Concordance study, proficiency testing and Italian population data on the new ENFSI/EDNAP loci D1S1656, D2S441, D10S1248, D12S391, D22S1045.

Authors:  C Previderè; P Grignani; F Alessandrini; M Alù; R Biondo; I Boschi; L Caenazzo; I Carboni; E Carnevali; F De Stefano; R Domenici; M Fabbri; E Giardina; S Inturri; S Pelotti; A Piccinini; M Piglionica; N Resta; S Turrina; A Verzeletti; S Presciuttini
Journal:  Forensic Sci Int Genet       Date:  2012-08-20       Impact factor: 4.882

10.  A large interstitial deletion encompassing the amelogenin gene on the short arm of the Y chromosome.

Authors:  Wanda Lattanzi; Marilena C Di Giacomo; Gennaro M Lenato; Guglielmina Chimienti; Gianfranco Voglino; Nicoletta Resta; Gabriella Pepe; Ginevra Guanti
Journal:  Hum Genet       Date:  2005-02-22       Impact factor: 4.132

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  6 in total

1.  Kinship analysis: assessment of related vs unrelated based on defined pedigrees.

Authors:  Stefania Turrina; Melissa Ferrian; Stefano Caratti; Emanuela Cosentino; Domenico De Leo
Journal:  Int J Legal Med       Date:  2015-11-20       Impact factor: 2.686

2.  [Polymorphism analysis of 20 autosomal short-tandem repeat loci in southern Chinese Han population].

Authors:  Ling Chen; Hui-Jie Lu; Wei-An DU; Ping-Ming Qiu; Chao Liu
Journal:  Nan Fang Yi Ke Da Xue Xue Bao       Date:  2016-02-20

3.  Population genetic analyses and evaluation of 22 autosomal STRs in Indian populations.

Authors:  Mugdha Singh; Madhusudan R Nandineni
Journal:  Int J Legal Med       Date:  2017-01-06       Impact factor: 2.686

4.  Investigator HDplex markers: allele frequencies and mutational events in a North Italian population.

Authors:  Stefania Turrina; Melissa Ferrian; Stefano Caratti; Domenico De Leo
Journal:  Int J Legal Med       Date:  2014-09-10       Impact factor: 2.686

5.  Sequence variations, flanking region mutations, and allele frequency at 31 autosomal STRs in the central Indian population by next generation sequencing (NGS).

Authors:  Hirak Ranjan Dash; Kamlesh Kaitholia; R K Kumawat; Anil Kumar Singh; Pankaj Shrivastava; Gyaneshwer Chaubey; Surajit Das
Journal:  Sci Rep       Date:  2021-12-01       Impact factor: 4.379

6.  Comprehensive analyses for genetic diversities of 19 autosomal STRs in Chinese Kazak group and its phylogenetic relationships with other continental populations.

Authors:  Yijie Wang; Xiaoye Jin; Wenqing Zhang; Wei Cui; Tingting Kong; Chong Chen; Yuxin Guo; Haotian Meng; Bofeng Zhu
Journal:  Forensic Sci Res       Date:  2020-05-20
  6 in total

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