Literature DB >> 24183673

The BET family of proteins targets moloney murine leukemia virus integration near transcription start sites.

Jan De Rijck1, Christine de Kogel, Jonas Demeulemeester, Sofie Vets, Sara El Ashkar, Nirav Malani, Frederic D Bushman, Bart Landuyt, Steven J Husson, Katrien Busschots, Rik Gijsbers, Zeger Debyser.   

Abstract

A hallmark of retroviral replication is integration of the viral genome into host cell DNA. This characteristic makes retrovirus-based vectors attractive delivery vehicles for gene therapy. However, adverse events in gene therapeutic trials, caused by activation of proto-oncogenes due to murine leukemia virus (MLV)-derived vector integration, hamper their application. Here, we show that bromodomain and extraterminal (BET) proteins (BRD2, BRD3, and BRD4) and MLV integrase specifically interact and colocalize within the nucleus of the cell. Inhibition of the BET proteins' chromatin interaction via specific bromodomain inhibitors blocks MLV virus replication at the integration step. MLV integration site distribution parallels the chromatin binding profile of BET proteins, and expression of an artificial fusion protein of the BET integrase binding domain with the chromatin interaction domain of the lentiviral targeting factor LEDGF/p75 retargets MLV integration away from transcription start sites and into the body of actively transcribed genes, conforming to the HIV integration pattern. Together, these data validate BET proteins as MLV integration targeting factors.
Copyright © 2013 The Authors. Published by Elsevier Inc. All rights reserved.

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Year:  2013        PMID: 24183673      PMCID: PMC4197836          DOI: 10.1016/j.celrep.2013.09.040

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  40 in total

1.  Gene therapy of X-linked severe combined immunodeficiency by use of a pseudotyped gammaretroviral vector.

Authors:  H Bobby Gaspar; Kathryn L Parsley; Steven Howe; Doug King; Kimberly C Gilmour; Joanna Sinclair; Gaby Brouns; Manfred Schmidt; Christof Von Kalle; Torben Barington; Marianne A Jakobsen; Hans O Christensen; Abdulaziz Al Ghonaium; Harry N White; John L Smith; Roland J Levinsky; Robin R Ali; Christine Kinnon; Adrian J Thrasher
Journal:  Lancet       Date:  2004 Dec 18-31       Impact factor: 79.321

2.  HIV-1 integrase forms stable tetramers and associates with LEDGF/p75 protein in human cells.

Authors:  Peter Cherepanov; Goedele Maertens; Paul Proost; Bart Devreese; Jozef Van Beeumen; Yves Engelborghs; Erik De Clercq; Zeger Debyser
Journal:  J Biol Chem       Date:  2002-10-28       Impact factor: 5.157

3.  Gene therapy of human severe combined immunodeficiency (SCID)-X1 disease.

Authors:  M Cavazzana-Calvo; S Hacein-Bey; G de Saint Basile; F Gross; E Yvon; P Nusbaum; F Selz; C Hue; S Certain; J L Casanova; P Bousso; F L Deist; A Fischer
Journal:  Science       Date:  2000-04-28       Impact factor: 47.728

4.  An essential role for LEDGF/p75 in HIV integration.

Authors:  Manuel Llano; Dyana T Saenz; Anne Meehan; Phonphimon Wongthida; Mary Peretz; William H Walker; Wulin Teo; Eric M Poeschla
Journal:  Science       Date:  2006-09-07       Impact factor: 47.728

5.  A role for LEDGF/p75 in targeting HIV DNA integration.

Authors:  Angela Ciuffi; Manuel Llano; Eric Poeschla; Christian Hoffmann; Jeremy Leipzig; Paul Shinn; Joseph R Ecker; Frederic Bushman
Journal:  Nat Med       Date:  2005-11-27       Impact factor: 53.440

6.  Sustained correction of X-linked severe combined immunodeficiency by ex vivo gene therapy.

Authors:  Salima Hacein-Bey-Abina; Françoise Le Deist; Frédérique Carlier; Cécile Bouneaud; Christophe Hue; Jean-Pierre De Villartay; Adrian J Thrasher; Nicolas Wulffraat; Ricardo Sorensen; Sophie Dupuis-Girod; Alain Fischer; E Graham Davies; Wietse Kuis; Lilly Leiva; Marina Cavazzana-Calvo
Journal:  N Engl J Med       Date:  2002-04-18       Impact factor: 91.245

7.  Transcription start regions in the human genome are favored targets for MLV integration.

Authors:  Xiaolin Wu; Yuan Li; Bruce Crise; Shawn M Burgess
Journal:  Science       Date:  2003-06-13       Impact factor: 47.728

8.  Proteogenomic characterization and mapping of nucleosomes decoded by Brd and HP1 proteins.

Authors:  Gary LeRoy; Iouri Chepelev; Peter A DiMaggio; Mario A Blanco; Barry M Zee; Keji Zhao; Benjamin A Garcia
Journal:  Genome Biol       Date:  2012-08-16       Impact factor: 13.583

9.  Retroviral DNA integration: viral and cellular determinants of target-site selection.

Authors:  Mary K Lewinski; Masahiro Yamashita; Michael Emerman; Angela Ciuffi; Heather Marshall; Gregory Crawford; Francis Collins; Paul Shinn; Jeremy Leipzig; Sridhar Hannenhalli; Charles C Berry; Joseph R Ecker; Frederic D Bushman
Journal:  PLoS Pathog       Date:  2006-06-23       Impact factor: 6.823

10.  Retroviral DNA integration: ASLV, HIV, and MLV show distinct target site preferences.

Authors:  Rick S Mitchell; Brett F Beitzel; Astrid R W Schroder; Paul Shinn; Huaming Chen; Charles C Berry; Joseph R Ecker; Frederic D Bushman
Journal:  PLoS Biol       Date:  2004-08-17       Impact factor: 8.029

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  94 in total

1.  Structure of the Brd4 ET domain bound to a C-terminal motif from γ-retroviral integrases reveals a conserved mechanism of interaction.

Authors:  Brandon L Crowe; Ross C Larue; Chunhua Yuan; Sonja Hess; Mamuka Kvaratskhelia; Mark P Foster
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-08       Impact factor: 11.205

2.  Adeno-Associated Virus-Based Gene Therapy for Lifelong Correction of Genetic Disease.

Authors:  Christian M Brommel; Ashley L Cooney; Patrick L Sinn
Journal:  Hum Gene Ther       Date:  2020-08-21       Impact factor: 5.695

3.  Retroviral Scanning: Mapping MLV Integration Sites to Define Cell-specific Regulatory Regions.

Authors:  Oriana Romano; Ingrid Cifola; Valentina Poletti; Marco Severgnini; Clelia Peano; Gianluca De Bellis; Fulvio Mavilio; Annarita Miccio
Journal:  J Vis Exp       Date:  2017-05-28       Impact factor: 1.355

Review 4.  Integration site selection by retroviruses and transposable elements in eukaryotes.

Authors:  Tania Sultana; Alessia Zamborlini; Gael Cristofari; Pascale Lesage
Journal:  Nat Rev Genet       Date:  2017-03-13       Impact factor: 53.242

5.  X-ray crystal structure of the N-terminal region of Moloney murine leukemia virus integrase and its implications for viral DNA recognition.

Authors:  Rongjin Guan; Sriram Aiyer; Marie L Cote; Rong Xiao; Mei Jiang; Thomas B Acton; Monica J Roth; Gaetano T Montelione
Journal:  Proteins       Date:  2017-02-03

6.  Enhancers are major targets for murine leukemia virus vector integration.

Authors:  Suk See De Ravin; Ling Su; Narda Theobald; Uimook Choi; Janet L Macpherson; Michael Poidinger; Geoff Symonds; Susan M Pond; Andrea L Ferris; Stephen H Hughes; Harry L Malech; Xiaolin Wu
Journal:  J Virol       Date:  2014-02-05       Impact factor: 5.103

7.  Toward a safer integration profile of MLV-based retroviral vectors.

Authors:  Axel Schambach
Journal:  Mol Ther       Date:  2014-08       Impact factor: 11.454

8.  Vector integration and tumorigenesis.

Authors:  Christof von Kalle; Annette Deichmann; Manfred Schmidt
Journal:  Hum Gene Ther       Date:  2014-06       Impact factor: 5.695

9.  Amplification, Next-generation Sequencing, and Genomic DNA Mapping of Retroviral Integration Sites.

Authors:  Erik Serrao; Peter Cherepanov; Alan N Engelman
Journal:  J Vis Exp       Date:  2016-03-22       Impact factor: 1.355

Review 10.  Multifunctional facets of retrovirus integrase.

Authors:  Duane P Grandgenett; Krishan K Pandey; Sibes Bera; Hideki Aihara
Journal:  World J Biol Chem       Date:  2015-08-26
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