Literature DB >> 24182083

Motional heterogeneity in human acetylcholinesterase revealed by a non-Gaussian model for elastic incoherent neutron scattering.

Judith Peters1, Gerald R Kneller.   

Abstract

We study the dynamical transition of human acetylcholinesterase by analyzing elastic neutron scattering data with a simulation gauged analytical model that goes beyond the standard Gaussian approximation for the elastic incoherent structure factor [G. R. Kneller and K. Hinsen, J. Chem. Phys. 131, 045104 (2009)]. The model exploits the whole available momentum transfer range in the experimental data and yields not only a neutron-weighted average of the atomic mean square position fluctuations, but also an estimation for their distribution. Applied to the neutron scattering data from human acetylcholinesterase, it reveals a strong increase of the motional heterogeneity at the two transition temperatures T = 150 K and T = 220 K, respectively, which can be located with less ambiguity than with the Gaussian model. We find that the first transition is essentially characterized by a change in the form of the elastic scattering profile and the second by a homogeneous increase of all motional amplitudes. These results are in agreement with previous combined experimental and simulation studies of protein dynamics, which attribute the first transition to an onset of methyl rotations and the second to more unspecific diffusion processes involving large amplitude motions.

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Year:  2013        PMID: 24182083     DOI: 10.1063/1.4825199

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  7 in total

1.  Dynamics of a family of cyan fluorescent proteins probed by incoherent neutron scattering.

Authors:  Maksym Golub; Virginia Guillon; Guillaume Gotthard; Dominik Zeller; Nicolas Martinez; Tilo Seydel; Michael M Koza; Céline Lafaye; Damien Clavel; David von Stetten; Antoine Royant; Judith Peters
Journal:  J R Soc Interface       Date:  2019-03-29       Impact factor: 4.118

2.  Determination of Dynamical Heterogeneity from Dynamic Neutron Scattering of Proteins.

Authors:  Derya Vural; Jeremy C Smith; Henry R Glyde
Journal:  Biophys J       Date:  2018-03-24       Impact factor: 4.033

3.  Molecular adaptation and salt stress response of Halobacterium salinarum cells revealed by neutron spectroscopy.

Authors:  Pierre Vauclare; Vincent Marty; Elisa Fabiani; Nicolas Martinez; Marion Jasnin; Frank Gabel; Judith Peters; Giuseppe Zaccai; Bruno Franzetti
Journal:  Extremophiles       Date:  2015-09-16       Impact factor: 2.395

4.  Direct comparison of elastic incoherent neutron scattering experiments with molecular dynamics simulations of DMPC phase transitions.

Authors:  Bachir Aoun; Eric Pellegrini; Marcus Trapp; Francesca Natali; Laura Cantù; Paola Brocca; Yuri Gerelli; Bruno Demé; Michael Marek Koza; Mark Johnson; Judith Peters
Journal:  Eur Phys J E Soft Matter       Date:  2016-04-27       Impact factor: 1.890

5.  A wrench in the works of human acetylcholinesterase: soman induced conformational changes revealed by molecular dynamics simulations.

Authors:  Brian J Bennion; Sebnem G Essiz; Edmond Y Lau; Jean-Luc Fattebert; Aiyana Emigh; Felice C Lightstone
Journal:  PLoS One       Date:  2015-04-13       Impact factor: 3.240

Review 6.  Sub-Nanosecond Dynamics of Pathologically Relevant Bio-Macromolecules Observed by Incoherent Neutron Scattering.

Authors:  Tatsuhito Matsuo; Judith Peters
Journal:  Life (Basel)       Date:  2022-08-17

7.  Molecular Dynamics of Lysozyme Amyloid Polymorphs Studied by Incoherent Neutron Scattering.

Authors:  Tatsuhito Matsuo; Alessio De Francesco; Judith Peters
Journal:  Front Mol Biosci       Date:  2022-01-17
  7 in total

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