Literature DB >> 24178112

Length variation in the internal transcribed spacers of ribosomal DNA in Picea abies and related species.

P Karvonen1, A E Szmidt, O Savolainen.   

Abstract

The structure and variation of nuclear ribosomal DNA (rDNA) units of Picea abies, (L.) Karst. was studied by restriction mapping and Southern hybridization. Conspicuous length variation was found in the internal transcribed spacer (ITS) region of P. abies, although the length of this region is highly conserved both within and among most of the plant species. Two types of ITS variants (A and B), displaying a size difference of 0.5 kb in the ITS2 region, were present within individuals of P. abies from Sweden, Central Europe and Siberia. A preliminary survey of 14 additional Eurasian and North American species of Picea suggested that length variation in the ITS region is widespread in this genus. Alltogether three length variants (A, B and C) were identified. Within individuals of eight Picea species, two length variants were present within the genome (combinations of A and B variants in P. glehnii, P. maximowiczii, P. omorika, P. polita and P. sitchensis and variants B and C in P. jezoensis, P. likiangensis and P. spinulosa). Within individuals from five species, however only one rDNA variant was present in their genome (variant A in P. aurantiaca, P. engelmannii, P. glauca, P. koraiensis and P. koyamai; variant B in P. bicolor). The ITS length variation will be useful as a molecular marker in evolutionary studies of the Picea species complex, whose phylogeny is controversial. The presence of intraindividual variation in, and shared polymorphism of the, ITS length variants raises questions about the occurrence of interspecific hybridization during the evolutionary history of Picea.

Entities:  

Year:  1994        PMID: 24178112     DOI: 10.1007/BF00224526

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  12 in total

1.  Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: an example from the compositae.

Authors:  B G Baldwin
Journal:  Mol Phylogenet Evol       Date:  1992-03       Impact factor: 4.286

Review 2.  Ribosomal DNA: molecular evolution and phylogenetic inference.

Authors:  D M Hillis; M T Dixon
Journal:  Q Rev Biol       Date:  1991-12       Impact factor: 4.875

3.  A conserved core structure in the 18-25S rRNA intergenic region from tobacco, Nicotiana rustica.

Authors:  K Venkateswarlu; R Nazar
Journal:  Plant Mol Biol       Date:  1991-08       Impact factor: 4.076

4.  Five major nuclear ribosomal repeats represent a large and variable fraction of the genomic DNA of Picea rubens and P. mariana.

Authors:  M S Bobola; D E Smith; A S Klein
Journal:  Mol Biol Evol       Date:  1992-01       Impact factor: 16.240

5.  Inheritance of chloroplast and mitochondrial DNA in Picea and composition of hybrids from introgression zones.

Authors:  B C Sutton; D J Flanagan; J R Gawley; C H Newton; D T Lester; Y A El-Kassaby
Journal:  Theor Appl Genet       Date:  1991-08       Impact factor: 5.699

6.  GENETIC STRUCTURE OF NORWAY SPRUCE (PICEA ABIES): CONCORDANCE OF MORPHOLOGICAL AND ALLOZYMIC VARIATION.

Authors:  Ulf Lagercrantz; Nils Ryman
Journal:  Evolution       Date:  1990-02       Impact factor: 3.694

7.  Classifying seedlots of Picea sitchensis and P. glauca in zones of introgression using restriction analysis of chloroplast DNA.

Authors:  A E Szmidt; Y A El-Kassaby; A Sigurgeirsson; T Aldèn; D Lindgren; J E Hällgren
Journal:  Theor Appl Genet       Date:  1988-12       Impact factor: 5.699

8.  High evolutionary divergence of the 5.8S ribosomal DNA in Mimulus glaucescens (Scrophulariaceae).

Authors:  C Ritland; N A Straus
Journal:  Plant Mol Biol       Date:  1993-07       Impact factor: 4.076

9.  Preliminary karyotype and chromosomal localization of ribosomal DNA sites in white spruce using fluorescence in situ hybridization.

Authors:  G R Brown; V Amarasinghe; G Kiss; J E Carlson
Journal:  Genome       Date:  1993-04       Impact factor: 2.166

10.  Characterisation of the genes for ribosomal RNA in flax.

Authors:  P B Goldsbrough; C A Cullis
Journal:  Nucleic Acids Res       Date:  1981-03-25       Impact factor: 16.971

View more
  2 in total

1.  Primers ITS1, ITS2 and ITS4 detect the intraspecies variability in the internal transcribed spacers and 5.8S rRNA gene region in clinical isolates of fungi.

Authors:  M Korabecná; V Liska; K Fajfrlík
Journal:  Folia Microbiol (Praha)       Date:  2003       Impact factor: 2.099

2.  Genomic Resources of Three Pulsatilla Species Reveal Evolutionary Hotspots, Species-Specific Sites and Variable Plastid Structure in the Family Ranunculaceae.

Authors:  Monika Szczecińska; Jakub Sawicki
Journal:  Int J Mol Sci       Date:  2015-09-15       Impact factor: 5.923

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.