Literature DB >> 24173537

Brazilian Microbiome Project: revealing the unexplored microbial diversity--challenges and prospects.

Victor Satler Pylro1, Luiz Fernando Wurdig Roesch, José Miguel Ortega, Alexandre Morais do Amaral, Marcos Rogério Tótola, Penny Ruth Hirsch, Alexandre Soares Rosado, Aristóteles Góes-Neto, Artur Luiz da Costa da Silva, Carlos Augusto Rosa, Daniel Kumazawa Morais, Fernando Dini Andreote, Gabriela Frois Duarte, Itamar Soares de Melo, Lucy Seldin, Márcio Rodrigues Lambais, Mariangela Hungria, Raquel Silva Peixoto, Ricardo Henrique Kruger, Siu Mui Tsai, Vasco Azevedo.   

Abstract

The Brazilian Microbiome Project (BMP) aims to assemble a Brazilian Metagenomic Consortium/Database. At present, many metagenomic projects underway in Brazil are widely known. Our goal in this initiative is to co-ordinate and standardize these together with new projects to come. It is estimated that Brazil hosts approximately 20 % of the entire world's macroorganism biological diversity. It is 1 of the 17 countries that share nearly 70 % of the world's catalogued animal and plant species, and is recognized as one of the most megadiverse countries. At the end of 2012, Brazil has joined GBIF (Global Biodiversity Information Facility), as associated member, to improve the access to the Brazilian biodiversity data in a free and open way. This was an important step toward increasing international collaboration and clearly shows the commitment of the Brazilian government in directing national policies toward sustainable development. Despite its importance, the Brazilian microbial diversity is still considered to be largely unknown, and it is clear that to maintain ecosystem dynamics and to sustainably manage land use, it is crucial to understand the biological and functional diversity of the system. This is the first attempt to collect and collate information about Brazilian microbial genetic and functional diversity in a systematic and holistic manner. The success of the BMP depends on a massive collaborative effort of both the Brazilian and international scientific communities, and therefore, we invite all colleagues to participate in this project.

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Year:  2013        PMID: 24173537     DOI: 10.1007/s00248-013-0302-4

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  3 in total

Review 1.  Replicate or lie.

Authors:  James I Prosser
Journal:  Environ Microbiol       Date:  2010-04-28       Impact factor: 5.491

2.  Rethinking microbial diversity analysis in the high throughput sequencing era.

Authors:  Leandro N Lemos; Roberta R Fulthorpe; Eric W Triplett; Luiz F W Roesch
Journal:  J Microbiol Methods       Date:  2011-03-30       Impact factor: 2.363

Review 3.  Microbial community profiling for human microbiome projects: Tools, techniques, and challenges.

Authors:  Micah Hamady; Rob Knight
Journal:  Genome Res       Date:  2009-04-21       Impact factor: 9.043

  3 in total
  32 in total

1.  Ecological succession reveals potential signatures of marine-terrestrial transition in salt marsh fungal communities.

Authors:  Francisco Dini-Andreote; Victor Satler Pylro; Petr Baldrian; Jan Dirk van Elsas; Joana Falcão Salles
Journal:  ISME J       Date:  2016-01-29       Impact factor: 10.302

2.  Unexplored Brazilian oceanic island host high salt tolerant biosurfactant-producing bacterial strains.

Authors:  Fábio Sérgio Paulino da Silva; Victor Satler Pylro; Pericles Leonardo Fernandes; Gisele Souza Barcelos; Karlos Henrique Martins Kalks; Carlos Ernesto Gonçalves Reynaud Schaefer; Marcos Rogério Tótola
Journal:  Extremophiles       Date:  2015-02-21       Impact factor: 2.395

3.  Fungal diversity in soils across a gradient of preserved Brazilian Cerrado.

Authors:  Ademir Sergio Ferreira de Araujo; Walderly Melgaço Bezerra; Vilma Maria Dos Santos; Luis Alfredo Pinheiro Leal Nunes; Maria do Carmo Catanho Pereira de Lyra; Marcia do Vale Barreto Figueiredo; Vania Maria Maciel Melo
Journal:  J Microbiol       Date:  2017-01-27       Impact factor: 3.422

4.  BMPOS: a Flexible and User-Friendly Tool Sets for Microbiome Studies.

Authors:  Victor S Pylro; Daniel K Morais; Francislon S de Oliveira; Fausto G Dos Santos; Leandro N Lemos; Guilherme Oliveira; Luiz F W Roesch
Journal:  Microb Ecol       Date:  2016-05-24       Impact factor: 4.552

5.  Manipulation of the soil microbiome regulates the colonization of plants by arbuscular mycorrhizal fungi.

Authors:  Bruna Arruda; Paul B L George; Agnès Robin; Denise de L C Mescolotti; Wilfrand F B Herrera; Davey L Jones; Fernando D Andreote
Journal:  Mycorrhiza       Date:  2021-08-07       Impact factor: 3.387

6.  Impact of long-term cropping of glyphosate-resistant transgenic soybean [Glycine max (L.) Merr.] on soil microbiome.

Authors:  Letícia Carlos Babujia; Adriana Pereira Silva; André Shigueyoshi Nakatani; Mauricio Egidio Cantão; Ana Tereza Ribeiro Vasconcelos; Jesuí Vergilio Visentainer; Mariangela Hungria
Journal:  Transgenic Res       Date:  2016-02-12       Impact factor: 2.788

7.  Gut microbiome, body weight, and mammographic breast density in healthy postmenopausal women.

Authors:  Lusine Yaghjyan; Volker Mai; Xuefeng Wang; Maria Ukhanova; Maximiliano Tagliamonte; Yessica C Martinez; Shannan N Rich; Kathleen M Egan
Journal:  Cancer Causes Control       Date:  2021-03-27       Impact factor: 2.506

8.  An Integrated Approach for Efficient Multi-Omics Joint Analysis.

Authors:  Massimiliano S Tagliamonte; Sheldon G Waugh; Mattia Prosperi; Volker Mai
Journal:  ACM BCB       Date:  2019-09

9.  Aliphatic Hydrocarbon Enhances Phenanthrene Degradation by Autochthonous Prokaryotic Communities from a Pristine Seawater.

Authors:  Edmo Montes Rodrigues; Daniel Kumazawa Morais; Victor Satler Pylro; Marc Redmile-Gordon; Juraci Alves de Oliveira; Luiz Fernando Wurdig Roesch; Dionéia Evangelista Cesar; Marcos Rogério Tótola
Journal:  Microb Ecol       Date:  2017-10-03       Impact factor: 4.552

10.  Prokaryotic community diversity during bioremediation of crude oil contaminated oilfield soil: effects of hydrocarbon concentration and salinity.

Authors:  Celia Marcela Camacho-Montealegre; Edmo Montes Rodrigues; Daniel Kumazawa Morais; Marcos Rogério Tótola
Journal:  Braz J Microbiol       Date:  2021-04-04       Impact factor: 2.476

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