Literature DB >> 24173073

An examination of the ability of RAPD markers to determine the relationships within and between Rubus species.

J Graham1, R J McNicol.   

Abstract

RAPD markers were generated from 13 different Rubus species in order to assess the degree of similarity between species from the important subgenera. All ten primers revealed scorable polymorphisms within both the closely related and the genetically diverse individuals. Three hundred and seventy-two markers were generated and scored from the material analysed. Estimates of similarity, dendrograms and principle co-ordinate analysis were calculated, with the results generally being in agreemen with previous classifications of the species studied, confirming the validity and usefulness of the RAPD method. However, amongst the species studied, R. macraei of the Idaeobats proved more diverse and grouped in with both the Idaeobats and Eubats at only 26% similarity.

Entities:  

Year:  1995        PMID: 24173073     DOI: 10.1007/BF00222932

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  4 in total

1.  DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

2.  Mathematical model for studying genetic variation in terms of restriction endonucleases.

Authors:  M Nei; W H Li
Journal:  Proc Natl Acad Sci U S A       Date:  1979-10       Impact factor: 11.205

3.  Fingerprinting genomes using PCR with arbitrary primers.

Authors:  J Welsh; M McClelland
Journal:  Nucleic Acids Res       Date:  1990-12-25       Impact factor: 16.971

4.  Genetic variation detected by use of the M13 "DNA fingerprint" probe in Malus, Prunus, and Rubus (Rosaceae).

Authors:  H Nybom; S H Rogstad; B A Schaal
Journal:  Theor Appl Genet       Date:  1990-02       Impact factor: 5.699

  4 in total
  5 in total

1.  The construction of a genetic linkage map of red raspberry (Rubus idaeus subsp. idaeus) based on AFLPs, genomic-SSR and EST-SSR markers.

Authors:  J Graham; K Smith; K MacKenzie; L Jorgenson; C Hackett; W Powell
Journal:  Theor Appl Genet       Date:  2004-05-04       Impact factor: 5.699

2.  Microscopic characterization of Pseudomonas Aeruginosa confines separate from clinical cases by testing RAPD-PCR method.

Authors:  Z Mahmmudi; A Emami; A A Gorzin
Journal:  J Med Life       Date:  2015

3.  Novel microsatellite markers acquired from Rubus coreanus Miq. and cross-amplification in other Rubus species.

Authors:  Gi-An Lee; Jae Young Song; Heh-Ran Choi; Jong-Wook Chung; Young-Ah Jeon; Jung-Ro Lee; Kyung-Ho Ma; Myung-Chul Lee
Journal:  Molecules       Date:  2015-04-10       Impact factor: 4.411

Review 4.  Molecular genetics and genomics of the Rosoideae: state of the art and future perspectives.

Authors:  Sara Longhi; Lara Giongo; Matteo Buti; Nada Surbanovski; Roberto Viola; Riccardo Velasco; Judson A Ward; Daniel J Sargent
Journal:  Hortic Res       Date:  2014-01-22       Impact factor: 6.793

5.  Sequence-related amplified polymorphism (SRAP) markers: A potential resource for studies in plant molecular biology(1.).

Authors:  Daniel W H Robarts; Andrea D Wolfe
Journal:  Appl Plant Sci       Date:  2014-07-11       Impact factor: 1.936

  5 in total

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