Literature DB >> 24169987

A genetic linkage map of Theobroma cacao L.

C Lanaud1, A M Risterucci, A K N'goran, D Clement, M H Flament, V Laurent, M Falque.   

Abstract

A linkage map of the cocoa genome comprising 193 loci has been constructed. These loci consist of 5 isozymes, 101 cDNA/RFLPs, 4 loci from genes of known function, 55 genomic DNA/RFLPs and 28 RAPDs. A population of 100 individuals derived from a cross between two heterozygous genotypes was used. Segregation analyses were performed with the JoinMap program. Ten linkage groups, which putatively correspond to the ten gametic chromosomes of cocoa, were identified. The map covers a total length of 759 cM with a 3.9 cM average distance between 2 markers. A small fraction (9%) of the markers deviated significantly from the expected Mendelian ratios.

Entities:  

Year:  1995        PMID： 24169987     DOI： 10.1007/BF00223910

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN： 0040-5752            Impact factor:   5.699


  19 in total

1.  High density molecular linkage maps of the tomato and potato genomes.

Authors:  S D Tanksley; M W Ganal; J P Prince; M C de Vicente; M W Bonierbale; P Broun; T M Fulton; J J Giovannoni; S Grandillo; G B Martin
Journal:  Genetics       Date:  1992-12       Impact factor: 4.562

2.  A Genetic Map of Lettuce (Lactuca sativa L.) with Restriction Fragment Length Polymorphism, Isozyme, Disease Resistance and Morphological Markers.

Authors:  B S Landry; R V Kesseli; B Farrara; R W Michelmore
Journal:  Genetics       Date:  1987-06       Impact factor: 4.562

3.  DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

4.  Extension of the linkage map in Citrus using random amplified polymorphic DNA (RAPD) markers and RFLP mapping of cold-acclimation-responsive loci.

Authors:  Q Cai; C L Guy; G A Moore
Journal:  Theor Appl Genet       Date:  1994-11       Impact factor: 5.699

5.  Genomic organization and nucleotide sequences of two corn histone H4 genes.

Authors:  G Philipps; N Chaubet; M E Chaboute; M Ehling; C Gigot
Journal:  Gene       Date:  1986       Impact factor: 3.688

6.  Cloning and characterization of ribosomal RNA genes from wheat and barley.

Authors:  W L Gerlach; J R Bedbrook
Journal:  Nucleic Acids Res       Date:  1979-12-11       Impact factor: 16.971

7.  A detailed RFLP map of Sorghum bicolor x S. propinquum, suitable for high-density mapping, suggests ancestral duplication of Sorghum chromosomes or chromosomal segments.

Authors:  L M Chittenden; K F Schertz; Y R Lin; R A Wing; A H Paterson
Journal:  Theor Appl Genet       Date:  1994-03       Impact factor: 5.699

8.  A partial genetic linkage map of slash pine (Pinus elliottii Engelm. var. elliottii) based on random amplified polymorphic DNAs.

Authors:  C D Nelson; W L Nance; R L Doudrick
Journal:  Theor Appl Genet       Date:  1993-10       Impact factor: 5.699

Review 9.  Construction of a genetic linkage map in man using restriction fragment length polymorphisms.

Authors:  D Botstein; R L White; M Skolnick; R W Davis
Journal:  Am J Hum Genet       Date:  1980-05       Impact factor: 11.025

10.  MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations.

Authors:  E S Lander; P Green; J Abrahamson; A Barlow; M J Daly; S E Lincoln; L A Newberg; L Newburg
Journal:  Genomics       Date:  1987-10       Impact factor: 5.736
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  12 in total

1.  A new cacao linkage map based on codominant markers: development and integration of 201 new microsatellite markers.

Authors:  T Pugh; O Fouet; A M Risterucci; P Brottier; M Abouladze; C Deletrez; B Courtois; D Clement; P Larmande; J A K N'Goran; C Lanaud
Journal:  Theor Appl Genet       Date:  2004-02-04       Impact factor: 5.699

2.  TropGENE-DB, a multi-tropical crop information system.

Authors:  Manuel Ruiz; Mathieu Rouard; Louis Marie Raboin; Marc Lartaud; Pierre Lagoda; Brigitte Courtois
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

3.  Estimation of heterozygosity in Ribes nigrum L. using RAPD markers.

Authors:  P G Lanham
Journal:  Genetica       Date:  1996-10       Impact factor: 1.082

4.  Creation of BAC genomic resources for cocoa ( Theobroma cacao L.) for physical mapping of RGA containing BAC clones.

Authors:  D Clément; C Lanaud; X Sabau; O Fouet; L Le Cunff; E Ruiz; A M Risterucci; J C Glaszmann; P Piffanelli
Journal:  Theor Appl Genet       Date:  2004-03-16       Impact factor: 5.699

5.  Identification of QTLs related to cocoa resistance to three species of Phytophthora.

Authors:  A M Risterucci; D Paulin; M Ducamp; J A K N'Goran; C Lanaud
Journal:  Theor Appl Genet       Date:  2003-09-13       Impact factor: 5.699

6.  Theobroma cacao L.: a genetic linkage map and quantitative trait loci analysis.

Authors:  D Crouzillat; E Lerceteau; V Petiard; J Morera; H Rodriguez; D Walker; W Phillips; C Ronning; R Schnell; J Osei; P Fritz
Journal:  Theor Appl Genet       Date:  1996-07       Impact factor: 5.699

7.  Discovery and mapping of a new expressed sequence tag-single nucleotide polymorphism and simple sequence repeat panel for large-scale genetic studies and breeding of Theobroma cacao L.

Authors:  Mathilde Allegre; Xavier Argout; Michel Boccara; Olivier Fouet; Yolande Roguet; Aurélie Bérard; Jean Marc Thévenin; Aurélie Chauveau; Ronan Rivallan; Didier Clement; Brigitte Courtois; Karina Gramacho; Anne Boland-Augé; Mathias Tahi; Pathmanathan Umaharan; Dominique Brunel; Claire Lanaud
Journal:  DNA Res       Date:  2011-12-30       Impact factor: 4.458

8.  Making a chocolate chip: development and evaluation of a 6K SNP array for Theobroma cacao.

Authors:  Donald Livingstone; Stefan Royaert; Conrad Stack; Keithanne Mockaitis; Greg May; Andrew Farmer; Christopher Saski; Ray Schnell; David Kuhn; Juan Carlos Motamayor
Journal:  DNA Res       Date:  2015-06-11       Impact factor: 4.458

9.  Identification of candidate genes involved in Witches' broom disease resistance in a segregating mapping population of Theobroma cacao L. in Brazil.

Authors:  Stefan Royaert; Johannes Jansen; Daniela Viana da Silva; Samuel Martins de Jesus Branco; Donald S Livingstone; Guiliana Mustiga; Jean-Philippe Marelli; Ioná Santos Araújo; Ronan Xavier Corrêa; Juan Carlos Motamayor
Journal:  BMC Genomics       Date:  2016-02-11       Impact factor: 3.969

Review 10.  Cacao biotechnology: current status and future prospects.

Authors:  Anushka M Wickramasuriya; Jim M Dunwell
Journal:  Plant Biotechnol J       Date:  2017-11-19       Impact factor: 9.803
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