Literature DB >> 24169816

Effects of conserved residues and naturally occurring mutations on Mycobacterium tuberculosis RecG helicase activity.

Ephrem Debebe Zegeye1,2, Seetha V Balasingham1,2, Jon K Laerdahl3,1,2, Håvard Homberset2, Per E Kristiansen4, Tone Tønjum1,2.   

Abstract

RecG is a helicase that is conserved in nearly all bacterial species. The prototypical Escherichia coli RecG promotes regression of stalled replication forks, participates in DNA recombination and DNA repair, and prevents aberrant replication. Mycobacterium tuberculosis RecG (RecGMtb) is a DNA-dependent ATPase that unwinds a variety of DNA substrates, although its preferred substrate is a Holliday junction. Here, we performed site-directed mutagenesis of selected residues in the wedge domain and motifs Q, I, Ib and VI of RecGMtb. Three of the 10 substitution mutations engineered were detected previously as naturally occurring SNPs in the gene encoding RecGMtb. Alanine substitution mutations at residues Q292, F286, K321 and R627 abolished the RecGMtb unwinding activity, whilst RecGMtb F99A, P285S and T408A mutants exhibited ~25-50 % lower unwinding activity than WT. We also found that RecGMtb bound ATP in the absence of a DNA cofactor.

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Year:  2013        PMID: 24169816      PMCID: PMC3917224          DOI: 10.1099/mic.0.072140-0

Source DB:  PubMed          Journal:  Microbiology (Reading)        ISSN: 1350-0872            Impact factor:   2.777


  54 in total

1.  Crystal structures of complexes of PcrA DNA helicase with a DNA substrate indicate an inchworm mechanism.

Authors:  S S Velankar; P Soultanas; M S Dillingham; H S Subramanya; D B Wigley
Journal:  Cell       Date:  1999-04-02       Impact factor: 41.582

Review 2.  Global dissemination of the Mycobacterium tuberculosis W-Beijing family strains.

Authors:  Pablo J Bifani; Barun Mathema; Natalia E Kurepina; Barry N Kreiswirth
Journal:  Trends Microbiol       Date:  2002-01       Impact factor: 17.079

3.  The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling.

Authors:  Konstantin Arnold; Lorenza Bordoli; Jürgen Kopp; Torsten Schwede
Journal:  Bioinformatics       Date:  2005-11-13       Impact factor: 6.937

4.  Enzymatic mechanism of the WRN helicase/nuclease.

Authors:  Robert M Brosh; Patricia L Opresko; Vilhelm A Bohr
Journal:  Methods Enzymol       Date:  2006       Impact factor: 1.600

5.  Characterisation of the catalytically active form of RecG helicase.

Authors:  P McGlynn; A A Mahdi; R G Lloyd
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

6.  Identification of a promoter motif regulating the major DNA damage response mechanism of Mycobacterium tuberculosis.

Authors:  Vera Gamulin; Helena Cetkovic; Ivan Ahel
Journal:  FEMS Microbiol Lett       Date:  2004-09-01       Impact factor: 2.742

7.  Single nucleotide polymorphisms in genes associated with isoniazid resistance in Mycobacterium tuberculosis.

Authors:  Srinivas V Ramaswamy; Robert Reich; Shu-Jun Dou; Linda Jasperse; Xi Pan; Audrey Wanger; Teresa Quitugua; Edward A Graviss
Journal:  Antimicrob Agents Chemother       Date:  2003-04       Impact factor: 5.191

8.  Mutational analysis of a DEAD box RNA helicase: the mammalian translation initiation factor eIF-4A.

Authors:  A Pause; N Sonenberg
Journal:  EMBO J       Date:  1992-07       Impact factor: 11.598

9.  Modulation of DNA damage tolerance in Escherichia coli recG and ruv strains by mutations affecting PriB, the ribosome and RNA polymerase.

Authors:  Akeel A Mahdi; Geoffrey S Briggs; Robert G Lloyd
Journal:  Mol Microbiol       Date:  2012-09-07       Impact factor: 3.501

10.  Dissociation of synthetic Holliday junctions by E. coli RecG protein.

Authors:  R G Lloyd; G J Sharples
Journal:  EMBO J       Date:  1993-01       Impact factor: 11.598

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  6 in total

1.  Mycobacterium smegmatis HelY Is an RNA-Activated ATPase/dATPase and 3'-to-5' Helicase That Unwinds 3'-Tailed RNA Duplexes and RNA:DNA Hybrids.

Authors:  Maria Loressa Uson; Heather Ordonez; Stewart Shuman
Journal:  J Bacteriol       Date:  2015-07-13       Impact factor: 3.490

2.  The Q Motif Is Involved in DNA Binding but Not ATP Binding in ChlR1 Helicase.

Authors:  Hao Ding; Manhong Guo; Venkatasubramanian Vidhyasagar; Tanu Talwar; Yuliang Wu
Journal:  PLoS One       Date:  2015-10-16       Impact factor: 3.240

3.  Characterization of the Neisseria meningitidis Helicase RecG.

Authors:  Getachew Tesfaye Beyene; Seetha V Balasingham; Stephan A Frye; Amine Namouchi; Håvard Homberset; Shewit Kalayou; Tahira Riaz; Tone Tønjum
Journal:  PLoS One       Date:  2016-10-13       Impact factor: 3.240

4.  Structure of mycobacterial 3'-to-5' RNA:DNA helicase Lhr bound to a ssDNA tracking strand highlights distinctive features of a novel family of bacterial helicases.

Authors:  Anam Ejaz; Heather Ordonez; Agata Jacewicz; Ryan Ferrao; Stewart Shuman
Journal:  Nucleic Acids Res       Date:  2018-01-09       Impact factor: 16.971

5.  Alanine mutation of the catalytic sites of Pantothenate Synthetase causes distinct conformational changes in the ATP binding region.

Authors:  Bharati Pandey; Sonam Grover; Sukriti Goyal; Anchala Kumari; Aditi Singh; Salma Jamal; Jagdeep Kaur; Abhinav Grover
Journal:  Sci Rep       Date:  2018-01-17       Impact factor: 4.379

6.  Movement of the RecG Motor Domain upon DNA Binding Is Required for Efficient Fork Reversal.

Authors:  Garrett M Warren; Richard A Stein; Hassane S Mchaourab; Brandt F Eichman
Journal:  Int J Mol Sci       Date:  2018-10-06       Impact factor: 5.923

  6 in total

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