Literature DB >> 24162222

Construction of a high-resolution genetic map and YAC-contigs in the tomato Tm-2a region.

K Pillen1, M W Ganal, S D Tanksley.   

Abstract

With the ultimate goal of cloning the Tobacco Mosaic Virus (TMV) resistance gene Tm-2a from tomato by means of positional cloning, a high-resolution map of a 4.3-cM region surrounding the Tm-2a gene has been constructed. In total, 13 RFLP and RAPD markers were mapped in close proximity to Tm-2a using 2112 individuals from an intraspecific Lycopersicon peruvianum backcross. The closest flanking markers were separated from Tm-2a by 0.05 cM on each side. Only one marker, the cDNA clone R12, co-segregated with Tm-2a. In order to physically cover the Tm-2a region, R12 and the flanking DNA marker TG207 were used to select homologous YAC clones. To-date, two YAC-contigs spanning approximately 340 kb and 360 kb have been constructed. The data obtained from these experiments indicate that recombination around the centromere of chromosome 9 is extremely suppressed.

Entities:  

Year:  1996        PMID： 24162222     DOI： 10.1007/BF00225750

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN： 0040-5752            Impact factor:   5.699


  36 in total

1.  A second-generation linkage map of the human genome.

Authors:  J Weissenbach; G Gyapay; C Dib; A Vignal; J Morissette; P Millasseau; G Vaysseix; M Lathrop
Journal:  Nature       Date:  1992-10-29       Impact factor: 49.962

2.  Use of isogenic lines and simultaneous probing to identify DNA markers tightly linked to the tm-2a gene in tomato.

Authors:  N D Young; D Zamir; M W Ganal; S D Tanksley
Journal:  Genetics       Date:  1988-10       Impact factor: 4.562

Review 3.  Chromosome landing: a paradigm for map-based gene cloning in plants with large genomes.

Authors:  S D Tanksley; M W Ganal; G B Martin
Journal:  Trends Genet       Date:  1995-02       Impact factor: 11.639

4.  Molecular genetic analysis of the ripening-inhibitor and non-ripening loci of tomato: a first step in genetic map-based cloning of fruit ripening genes.

Authors:  J J Giovannoni; E N Noensie; D M Ruezinsky; X Lu; S L Tracy; M W Ganal; G B Martin; K Pillen; K Alpert; S D Tanksley
Journal:  Mol Gen Genet       Date:  1995-07-28

5.  LINKAGE-1: a PASCAL computer program for the detection and analysis of genetic linkage.

Authors:  K A Suiter; J F Wendel; J S Case
Journal:  J Hered       Date:  1983 May-Jun       Impact factor: 2.645

6.  Mutations in the tobacco mosaic virus 30-kD protein gene overcome Tm-2 resistance in tomato.

Authors:  T Meshi; F Motoyoshi; T Maeda; S Yoshiwoka; H Watanabe; Y Okada
Journal:  Plant Cell       Date:  1989-05       Impact factor: 11.277

7.  High resolution RFLP map around the root knot nematode resistance gene (Mi) in tomato.

Authors:  R Messeguer; M Ganal; M C de Vicente; N D Young; H Bolkan; S D Tanksley
Journal:  Theor Appl Genet       Date:  1991-10       Impact factor: 5.699

Review 8.  Construction of a genetic linkage map in man using restriction fragment length polymorphisms.

Authors:  D Botstein; R L White; M Skolnick; R W Davis
Journal:  Am J Hum Genet       Date:  1980-05       Impact factor: 11.025

9.  RFLP linkage analysis of the Cf-4 and Cf-9 genes for resistance toCladosporium fulvum in tomato.

Authors:  P J Balint-Kurti; M S Dixon; D A Jones; K A Norcott; J D Jones
Journal:  Theor Appl Genet       Date:  1994-08       Impact factor: 5.699

10.  Two concomitant base substitutions in the putative replicase genes of tobacco mosaic virus confer the ability to overcome the effects of a tomato resistance gene, Tm-1.

Authors:  T Meshi; F Motoyoshi; A Adachi; Y Watanabe; N Takamatsu; Y Okada
Journal:  EMBO J       Date:  1988-06       Impact factor: 11.598
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  5 in total

1.  Development of a genomic library of near isogenic lines (NILs) in melon (Cucumis melo L.) from the exotic accession PI161375.

Authors:  Iban Eduardo; Pere Arús; Antonio J Monforte
Journal:  Theor Appl Genet       Date:  2005-10-06       Impact factor: 5.699

2.  High-resolution mapping and isolation of a yeast artificial chromosome contig containing fw2.2: a major fruit weight quantitative trait locus in tomato.

Authors:  K B Alpert; S D Tanksley
Journal:  Proc Natl Acad Sci U S A       Date:  1996-12-24       Impact factor: 11.205

3.  Evidence of cryptic introgression in tomato (Solanum lycopersicum L.) based on wild tomato species alleles.

Authors:  Joanne A Labate; Larry D Robertson
Journal:  BMC Plant Biol       Date:  2012-08-07       Impact factor: 4.215

4.  Multiple QTL for horticultural traits and quantitative resistance to Phytophthora infestans linked on Solanum habrochaites chromosome 11.

Authors:  J Erron Haggard; Emily B Johnson; Dina A St Clair
Journal:  G3 (Bethesda)       Date:  2014-12-12       Impact factor: 3.154

5.  Detection of an inversion in the Ty-2 region between S. lycopersicum and S. habrochaites by a combination of de novo genome assembly and BAC cloning.

Authors:  Anne-Marie A Wolters; Myluska Caro; Shufang Dong; Richard Finkers; Jianchang Gao; Richard G F Visser; Xiaoxuan Wang; Yongchen Du; Yuling Bai
Journal:  Theor Appl Genet       Date:  2015-07-08       Impact factor: 5.699
  5 in total

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