Literature DB >> 24161197

Slowing DNA translocation through a nanopore using a functionalized electrode.

Padmini Krishnakumar1, Brett Gyarfas, Weisi Song, Suman Sen, Peiming Zhang, Predrag Krstić, Stuart Lindsay.   

Abstract

Nanopores were fabricated with an integrated microscale Pd electrode coated with either a hydrogen-bonding or hydrophobic monolayer. Bare pores, or those coated with octanethiol, translocated single-stranded DNA with times of a few microseconds per base. Pores functionalized with 4(5)-(2-mercaptoethyl)-1H-imidazole-2-carboxamide slowed average translocation times, calculated as the duration of the event divided by the number of bases translocated, to about 100 μs per base at biases in the range of 50 to 80 mV.

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Year:  2013        PMID： 24161197      PMCID： PMC3875158          DOI： 10.1021/nn404743f

Source DB:  PubMed          Journal:  ACS Nano        ISSN： 1936-0851            Impact factor:   15.881


  23 in total

1.  Rapid electronic detection of probe-specific microRNAs using thin nanopore sensors.

Authors:  Meni Wanunu; Tali Dadosh; Vishva Ray; Jingmin Jin; Larry McReynolds; Marija Drndić
Journal:  Nat Nanotechnol       Date:  2010-10-24       Impact factor: 39.213

2.  Identifying single bases in a DNA oligomer with electron tunnelling.

Authors:  Shuo Huang; Jin He; Shuai Chang; Peiming Zhang; Feng Liang; Shengqin Li; Michael Tuchband; Alexander Fuhrmann; Robert Ros; Stuart Lindsay
Journal:  Nat Nanotechnol       Date:  2010-11-14       Impact factor: 39.213

3.  Slowing DNA translocation in a solid-state nanopore.

Authors:  Daniel Fologea; James Uplinger; Brian Thomas; David S McNabb; Jiali Li
Journal:  Nano Lett       Date:  2005-09       Impact factor: 11.189

Review 4.  Solid-state nanopore technologies for nanopore-based DNA analysis.

Authors:  Ken Healy; Birgitta Schiedt; Alan P Morrison
Journal:  Nanomedicine (Lond)       Date:  2007-12       Impact factor: 5.307

5.  Origin of giant ionic currents in carbon nanotube channels.

Authors:  Pei Pang; Jin He; Jae Hyun Park; Predrag S Krstić; Stuart Lindsay
Journal:  ACS Nano       Date:  2011-09-02       Impact factor: 15.881

6.  Interpreting the widespread nonlinear force spectra of intermolecular bonds.

Authors:  Raymond W Friddle; Aleksandr Noy; James J De Yoreo
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-06       Impact factor: 11.205

7.  Chemical recognition and binding kinetics in a functionalized tunnel junction.

Authors:  Shuai Chang; Shuo Huang; Hao Liu; Peiming Zhang; Feng Liang; Rena Akahori; Shengqin Li; Brett Gyarfas; John Shumway; Brian Ashcroft; Jin He; Stuart Lindsay
Journal:  Nanotechnology       Date:  2012-06-15       Impact factor: 3.874

8.  Synthesis, physicochemical properties, and hydrogen bonding of 4(5)-substituted 1-H-imidazole-2-carboxamide, a potential universal reader for DNA sequencing by recognition tunneling.

Authors:  Feng Liang; Shengqing Li; Stuart Lindsay; Peiming Zhang
Journal:  Chemistry       Date:  2012-03-29       Impact factor: 5.236

9.  Palladium electrodes for molecular tunnel junctions.

Authors:  Shuai Chang; Suman Sen; Peiming Zhang; Brett Gyarfas; Brian Ashcroft; Steven Lefkowitz; Hongbo Peng; Stuart Lindsay
Journal:  Nanotechnology       Date:  2012-10-04       Impact factor: 3.874

10.  Electrostatic focusing of unlabelled DNA into nanoscale pores using a salt gradient.

Authors:  Meni Wanunu; Will Morrison; Yitzhak Rabin; Alexander Y Grosberg; Amit Meller
Journal:  Nat Nanotechnol       Date:  2009-12-20       Impact factor: 39.213
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  9 in total

1.  Solid-state nanopore localization by controlled breakdown of selectively thinned membranes.

Authors:  Autumn T Carlsen; Kyle Briggs; Adam R Hall; Vincent Tabard-Cossa
Journal:  Nanotechnology       Date:  2017-01-03       Impact factor: 3.874

2.  Slowing DNA Transport Using Graphene-DNA Interactions.

Authors:  Shouvik Banerjee; James Wilson; Jiwook Shim; Manish Shankla; Elise A Corbin; Aleksei Aksimentiev; Rashid Bashir
Journal:  Adv Funct Mater       Date:  2015-02-11       Impact factor: 18.808

3.  Physical model for recognition tunneling.

Authors:  Predrag Krstić; Brian Ashcroft; Stuart Lindsay
Journal:  Nanotechnology       Date:  2015-02-03       Impact factor: 3.874

4.  Click Addition of a DNA Thread to the N-Termini of Peptides for Their Translocation through Solid-State Nanopores.

Authors:  Sudipta Biswas; Weisi Song; Chad Borges; Stuart Lindsay; Peiming Zhang
Journal:  ACS Nano       Date:  2015-09-16       Impact factor: 15.881

Review 5.  Graphene nanodevices for DNA sequencing.

Authors:  Stephanie J Heerema; Cees Dekker
Journal:  Nat Nanotechnol       Date:  2016-02       Impact factor: 39.213

6.  The promises and challenges of solid-state sequencing.

Authors:  Stuart Lindsay
Journal:  Nat Nanotechnol       Date:  2016-02       Impact factor: 39.213

7.  Label-free optical detection of biomolecular translocation through nanopore arrays.

Authors:  Andrey Ivankin; Robert Y Henley; Joseph Larkin; Spencer Carson; Michael L Toscano; Meni Wanunu
Journal:  ACS Nano       Date:  2014-09-22       Impact factor: 15.881

Review 8.  The evolution of nanopore sequencing.

Authors:  Yue Wang; Qiuping Yang; Zhimin Wang
Journal:  Front Genet       Date:  2015-01-07       Impact factor: 4.599

9.  Selective detections of single-viruses using solid-state nanopores.

Authors:  Akihide Arima; Makusu Tsutsui; Ilva Hanun Harlisa; Takeshi Yoshida; Masayoshi Tanaka; Kazumichi Yokota; Wataru Tonomura; Masateru Taniguchi; Mina Okochi; Takashi Washio; Tomoji Kawai
Journal:  Sci Rep       Date:  2018-11-02       Impact factor: 4.379
  9 in total

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