Literature DB >> 24151957

Bioinspired graphene nanopores with voltage-tunable ion selectivity for Na(+) and K(+).

Zhongjin He1, Jian Zhou, Xiaohua Lu, Ben Corry.   

Abstract

Biological protein channels have many remarkable properties such as gating, high permeability, and selectivity, which have motivated researchers to mimic their functions for practical applications. Herein, using molecular dynamics simulations, we design bioinspired nanopores in graphene sheets that can discriminate between Na(+) and K(+), two ions with very similar properties. The simulation results show that, under transmembrane voltage bias, a nanopore containing four carbonyl groups to mimic the selectivity filter of the KcsA K(+) channel preferentially conducts K(+) over Na(+). A nanopore functionalized by four negatively charged carboxylate groups to mimic the selectivity filter of the NavAb Na(+) channel selectively binds Na(+) but transports K(+) over Na(+). Surprisingly, the ion selectivity of the smaller diameter pore containing three carboxylate groups can be tuned by changing the magnitude of the applied voltage bias. Under lower voltage bias, it transports ions in a single-file manner and exhibits Na(+) selectivity, dictated by the knock-on ion conduction and selective blockage by Na(+). Under higher voltage bias, the nanopore is K(+)-selective, as the blockage by Na(+) is destabilized and the stronger affinity for carboxylate groups slows the passage of Na(+) compared with K(+). The computational design of biomimetic ion-selective nanopores helps to understand the mechanisms of selectivity in biological ion channels and may also lead to a wide range of potential applications such as sensitive ion sensors, nanofiltration membranes for Na(+)/K(+) separation, and voltage-tunable nanofluidic devices.

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Year:  2013        PMID: 24151957     DOI: 10.1021/nn4043628

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  16 in total

Review 1.  Fundamental transport mechanisms, fabrication and potential applications of nanoporous atomically thin membranes.

Authors:  Luda Wang; Michael S H Boutilier; Piran R Kidambi; Doojoon Jang; Nicolas G Hadjiconstantinou; Rohit Karnik
Journal:  Nat Nanotechnol       Date:  2017-06-06       Impact factor: 39.213

2.  Electro-Mechanical Conductance Modulation of a Nanopore Using a Removable Gate.

Authors:  Shidi Zhao; Laura Restrepo-Pérez; Misha Soskine; Giovanni Maglia; Chirlmin Joo; Cees Dekker; Aleksei Aksimentiev
Journal:  ACS Nano       Date:  2019-02-08       Impact factor: 15.881

3.  Modulation of Molecular Flux Using a Graphene Nanopore Capacitor.

Authors:  Manish Shankla; Aleksei Aksimentiev
Journal:  J Phys Chem B       Date:  2017-01-17       Impact factor: 2.991

4.  Colloquium: Ionic phenomena in nanoscale pores through 2D materials.

Authors:  Subin Sahu; Michael Zwolak
Journal:  Rev Mod Phys       Date:  2019       Impact factor: 54.494

5.  Computational methods and theory for ion channel research.

Authors:  C Guardiani; F Cecconi; L Chiodo; G Cottone; P Malgaretti; L Maragliano; M L Barabash; G Camisasca; M Ceccarelli; B Corry; R Roth; A Giacomello; B Roux
Journal:  Adv Phys X       Date:  2022

6.  Molecular Dynamics of Ion Conduction through the Selectivity Filter of the NaVAb Sodium Channel.

Authors:  Karen M Callahan; Benoît Roux
Journal:  J Phys Chem B       Date:  2018-10-29       Impact factor: 2.991

Review 7.  Water in Nanopores and Biological Channels: A Molecular Simulation Perspective.

Authors:  Charlotte I Lynch; Shanlin Rao; Mark S P Sansom
Journal:  Chem Rev       Date:  2020-08-25       Impact factor: 60.622

8.  Electro- and magneto-modulated ion transport through graphene oxide membranes.

Authors:  Pengzhan Sun; Feng Zheng; Kunlin Wang; Minlin Zhong; Dehai Wu; Hongwei Zhu
Journal:  Sci Rep       Date:  2014-10-28       Impact factor: 4.379

9.  Ion selectivity of graphene nanopores.

Authors:  Ryan C Rollings; Aaron T Kuan; Jene A Golovchenko
Journal:  Nat Commun       Date:  2016-04-22       Impact factor: 14.919

10.  A computational assessment of the permeability and salt rejection of carbon nanotube membranes and their application to water desalination.

Authors:  Michael Thomas; Ben Corry
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2016-02-13       Impact factor: 4.226

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