| Literature DB >> 24151467 |
Gail D Anderson1, Todd C Peterson, Cole Vonder Haar, Eric D Kantor, Fred M Farin, Theo K Bammler, James W Macdonald, Michael R Hoane.
Abstract
The goal of this study was to compare the effects of two inflammatory modulators, erythropoietin (EPO) and anakinra, on functional recovery and brain gene expression following a cortical contusion impact (CCI) injury. Dosage regimens were designed to provide serum concentrations in the range obtained with clinically approved doses. Functional recovery was assessed using both motor and spatial learning tasks and neuropathological measurements conducted in the cortex and hippocampus. Microarray-based transcriptional profiling was used to determine the effect on gene expression at 24 h, 72 h, and 7 days post-CCI. Ingenuity Pathway Analysis was used to evaluate the effect on relevant functional categories. EPO and anakinra treatment resulted in significant changes in brain gene expression in the CCI model demonstrating acceptable brain penetration. At all three time points, EPO treatment resulted in significantly more differentially expressed genes than anakinra. For anakinra at 24 h and EPO at 24 h, 72 h, and 7 days, the genes in the top 3 functional categories were involved in cellular movement, inflammatory response and cell-to-cell signaling. For EPO, the majority of the genes in the top 10 canonical pathways identified were associated with inflammatory and immune signaling processes. This was true for anakinra only at 24 h post-traumatic brain injury (TBI). The immunomodulation effects of EPO and anakinra did not translate into positive effects on functional behavioral and lesion studies. Treatment with either EPO or anakinra failed to induce significant beneficial effects on recovery of function or produce any significant effects on the prevention of injury induced tissue loss at 30 days post-injury. In conclusion, treatment with EPO or anakinra resulted in significant effects on gene expression in the brain without affecting functional outcome. This suggests that targeting these inflammatory processes alone may not be sufficient for preventing secondary injuries after TBI.Entities:
Keywords: anakinra; cortical contusion impact; erythropoietin; gene expression; recovery of function; traumatic brain injury
Year: 2013 PMID: 24151467 PMCID: PMC3798024 DOI: 10.3389/fphar.2013.00129
Source DB: PubMed Journal: Front Pharmacol ISSN: 1663-9812 Impact factor: 5.810
Figure 1Concentration-time curves after administration of (A) EPO 2500 mg/kg i.p. for the first dose, followed by s.c. every 12 h and (B) anakinra 100 mg/kg i.p. for the first dose, followed by s.c. every 12 h.
Figure 2Sensorimotor Assessment. (A) The Locomotor Placing task showing the average fault scores (+SEM) for days 2, 4, 6, 8, and 10 post-CCI. No significant differences between the treated animals and vehicle were found. A trend toward worsening was seen in the anakinra-treated group. (B) The Rotorod test showing the average latency to fall (+SEM) off of the rotating cylinder for day's 8–12 post-CCI. No significant differences between the treated animals and vehicle were found.
Figure 3Cognitive assessment. (A) The MWM reference memory task showing the average latency (+SEM) to reach the platform on day's 14–17 post-CCI. No significant differences between the treated animals and vehicle were found. (B) The MWM working memory task showing the average latency (+SEM) to reach the platform on day's 21–23 post-CCI. No significant differences between the treated animals and vehicle were found.
Figure 4Lesion Analysis. (A) The average (+SEM) percent reduction in hemispherical, cortical, and hippocampal volumes between the ipsilateral and contralateral sides of the injury. No significant differences between the treated animals and vehicle were found. (B) Representative images of cresyl violet stained tissue throughout the injury coordinates; −0.08 mm, −1.8 mm, −2.8 mm, and −3.8 mm, relative to bregma. Scale bar = 2.0 mm.
The number of differentially expressed genes probes (>1.5-fold up or down, .
| 1014 | 1457 | 2471 | 1330 | 1956 | 3286 | 318 | 1104 | 1422 | |
| 137 | 58 | 195 | 178 | 47 | 245 | 15 | 322 | 337 | |
| 103 | 17 | 120 | 33 | 25 | 58 | 31 | 178 | 209 | |
Figure 5The Venn diagrams show the number of genes whose expression was up or down regulated more than 1.5-fold (. Venn diagrams were generated with the Bioconductorlimma package.
The effect of Erythropoietin, Anakinra and TBI (vehicle/sham) on genes of interest (1.5 fold change, .
| 10775968 | Alb | Albumin | 1.91 | n.s. | 0.50 |
| 10911380 | Aldh1a2 | Aldehyde dehydrogenase 1 family, member A2 | 1.97 | n.s. | n.s. |
| 10744425 | Alox15 | Arachidonate 15-lipoxygenase | 3.76 | 1.95 | n.s. |
| 10821016 | Ccnb1 | Cyclin B1 | 1.50 | n.s. | n.s. |
| 10717195 | Ccnb2 | Cyclin B2 | 1.53 | n.s. | n.s. |
| 10921163 | Ccr1 | Chemokine (C-C motif) receptor 1 | 0.49 | 0.59 | 9.78 |
| 10829761 | Cdk1 | Cyclin-dependent kinase 1 | 1.50 | n.s. | 2.36 |
| 10775896 | Cxcl3 | Chemokine (C-X-C motif) ligand 2 | 0.48 | n.s. | 11.92 |
| 10924245 | Cxcr2 | Chemokines (C-X-C motif) receptor 2 | 0.49 | 0.47 | 18.82 |
| 10825153 | Fcgr1a | Fc fragment of IgG, high affinity Ia, receptor | 0.66 | n.s. | 7.36 |
| 10755148 | Fetub | Fetuin B | n.s. | 0.64 | 2.48 |
| 10926967 | Gsta2 | Glutathione-S-transferase alpha 2 | 1.56 | n.s. | 0.42 |
| 10849841 | IL1b | Interleukin 1 beta | 0.48 | 0.59 | 6.82 |
| 10922816 | IL1r2 | Interleukin 1 receptor, type II | 0.53 | 0.64 | 7.10 |
| 10834109 | IL1rn | Interleukin 1 receptor antagonist | 0.46 | 0.59 | 17.23 |
| 10922882 | IL18rap | Interleukin 18 receptor accessory protein | 0.64 | 0.66 | 2.38 |
| 10907689 | Itga5 | Integrin, alpha 5 | 0.66 | n.s. | 4.63 |
| 10711299 | Itgax | Integrin, alpha X | 0.61 | 0.44 | 4.35 |
| 10810736 | Lcat | Lecithin cholesterol acyltransferase | 1.55 | n.s. | 0.44 |
| 10736312 | Nos2 | Nitric oxide synthase 2, inducible | 0.42 | 0.51 | 7.71 |
| 10873341 | Pla2g2a | Phospholipase A2, group IIA | n.s. | 1.77 | 2.23 |
| 10708214 | Prc1 | Protein regulator of cytokinesis 1 | 1.52 | 1.64 | 1.54 |
| 10835817 | Ptgs1 | Prostaglandin-endoperoxide synthase 1 | n.s. | 1.52 | n.s. |
| 10764551 | Ptgs2 | Prostaglandin-endoperoxide synthase 2 | 0.56 | n.s. | 2.67 |
| 10742194 | Pttg1 | Pituitary tumor-transforming 1 | 1.57 | n.s. | n.s. |
| 10738130 | Rara | Retinoic acid receptor, alpha | 0.66 | n.s. | 1.83 |
| 10786108 | Rarb | Retinoic acid receptor, beta | 1.94 | n.s. | 0.25 |
| 10827686 | RT1-M6-1 | RT1 class I, locus M6, gene 1 | 0.46 | n.s. | 2.13 |
| 10827691 | RT1-M6-2 | RT1 class I, locus M6, gene 2 | 0.48 | n.s. | 2.21 |
| 10817071 | S100a8 | S100 calcium binding protein A8 | n.s. | 0.66 | 3.28 |
| 10934608 | Tir13 | Toll-like receptor 13 | 0.64 | 0.17 | 6.31 |
| 10770577 | Tgfb2 | Transforming growth factor, beta 2 | 0.63 | n.s. | n.s. |
| 10746976 | Top2a | Topoisomerase (DNA) II alpha | 1.50 | n.s. | 3.26 |
| 10885393 | Akap5 | A kinase (PRKA) anchor protein 5 | 1.54 | n.s. | 0.57 |
| 10932912 | Alas2 | Aminolevulinate, delta-, synthase 2 | 2.96 | 1.87 | n.s. |
| 10744425 | Alox15 | Arachidonate 15-lipoxygenase | 14.84 | 1.75 | n.s. |
| 10736697 | Ccl2 | Chemokines (C-C motif) ligand 2 | 0.66 | n.s. | 45.91 |
| 10736702 | Ccl7 | Chemokines (C-C motif) ligand 7 | 0.52 | n.s. | 9.29 |
| 10858566 | Clec4a2 | C-type lectin domain family 4, member A2 | 0.61 | n.s. | 7.66 |
| 10866019 | Clec7a | C-type lectin domain family 7, member A | 0.59 | n.s. | 30.82 |
| 10914614 | Ccr2 | Chemokine (C-C motif) receptor 2 | 0.51 | n.s. | 11.00 |
| 10865585 | Cd4 | Cd4 molecule | 0.53 | n.s. | 2.86 |
| 10856274 | Cd8a | CD8a molecule | 0.57 | n.s. | 5.90 |
| 10856265 | Cd8b | CD8b molecule | 0.56 | n.s. | 5.85 |
| 10802013 | Cd72 | Cd74 molecule, major histocompatibility complex, class II invariant chain | 0.64 | n.s. | 3.93 |
| 10897428 | Csf2rb | Colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) | 0.60 | n.s. | 10.88 |
| 10767373 | Cxcr4 | Chemokine (C-X-C motif) receptor 4 | 0.63 | n.s. | 2.65 |
| 10811571 | Cyba | Cytochrome b-245, alpha polypeptide | 0.66 | n.s. | 3.95 |
| 10936899 | Cybb | Cytochrome b-245, beta polypeptide | 0.65 | n.s. | 17.68 |
| 10732652 | Dusp1 | Dual specificity phosphatase 1 | n.s. | 1.51 | 0.40 |
| 10828344 | HLA-DRA | Major histocompatibility complex, class II, DR alpha | 0.55 | 0.65 | 7.18 |
| 10831657 | HLA-DRB1 | Major histocompatibility complex, class II, DR beta 1 | 0.63 | 0.69 | 2.50 |
| 10828351 | HLA-DQA1 | Major histocompatibility complex, class II, DQ alpha 1 | 0.60 | 0.71 | 3.92 |
| 10767518 | Ikbke | Inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon | 0.66 | n.s. | 2.30 |
| 10834109 | ILr1n | Interleukin 1 receptor antagonist | 0.55 | n.s. | 9.09 |
| 10938654 | IL2rg | Interleukin 2 receptor, gamma | 0.65 | n.s. | 4.34 |
| 10832306 | Itgb2 | Integrin, beta 2 | 0.65 | n.s. | 7.52 |
| 10907689 | Itgb5 | Integrin, alpha 5 (fibronectin receptor, alpha polypeptide) | 0.60 | n.s. | 4.13 |
| 10907881 | Mmp3 | Matrix metallopeptidase 3 | 0.43 | 0.51 | 3.22 |
| 10780205 | Mmp14 | Matrix metallopeptidase 14 (membrane-inserted) | 0.61 | n.s. | 2.66 |
| 10796476 | Mrc1 | Mannose receptor, C type 1 | 0.63 | n.s. | 4.64 |
| 10757898 | Ncf1 | Neutrophil cytosolic factor 1 | 0.60 | n.s. | 6.81 |
| 10764722 | Ncf2 | Neutrophil cytosolic factor 2 | 0.65 | n.s. | 4.32 |
| 10873336 | Pla2g2a | Phospholipase A2, group IID | 0.54 | n.s. | 4.76 |
| 10828351 | RT1-Ba | RT1 class II, locus Ba | 0.60 | n.s. | 3.92 |
| 10831557 | RT1-Db1 | RT1 class II, locus Db1 | 0.63 | n.s. | 2.50 |
| 10797509 | Syk | Spleen tyrosine kinase | 0.66 | n.s. | 4.14 |
| 10819379 | Adh1c | Alcohol dehydrogenase (class 1) | 1.64 | n.s | 1.61 |
| 10854406 | Akr1b10 | Aldo-ketoreductase family 1, member B10 | 1.90 | n.s. | n.s. |
| 10911380 | Aldh1a2 | Aldehyde dehydrogenase 1 family, member A2 | 1.81 | n.s. | 1.61 |
| 10722992 | Anpep | Alanyl (membrane) aminopeptidase | 2.44 | n.s. | 2.74 |
| 10744425 | Alox15 | Arachidonate 15-lipoxygenase | 18.75 | n.s. | n.s. |
| 10719524 | Apolipoprotein C-I (Apoc1) | 1.69 | n.s. | n.s. | |
| 10848030 | Bbox1 | Butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 | n.s. | 1.61 | n.s. |
| 10914614 | Ccr2 | Chemokine (C-C motif) receptor 2 | n.s. | 0.63 | n.s. |
| 10803991 | Cd14 | CD14 molecule | 1.59 | n.s. | 2.06 |
| 10940473 | Cd36 | CD36 molecule (thrombospondin receptor) | 3.97 | n.s. | 2.62 |
| 10935177 | Cldn2 | Claudin 2 | 3.27 | 3.85 | 0.19 |
| 10767373 | Cxcr4 | Chemokine (C-X-C motif) receptor 4 | 1.51 | n.s. | n.s. |
| 10936899 | Cybb | Cytochrome b-245, beta polypeptide | 1.65 | n.s. | 10.08 |
| 10765212 | F5 | Coagulation factor V (proaccelerin, labile factor) | 2.22 | 3.03 | 0.46 |
| 10794734 | F13a1 | Coagulation factor XIII, A1 polypeptide | 2.00 | n.s. | n.s. |
| 10810778 | Dpep2 | Dipeptidase 2 | 1.67 | n.s. | 1.84 |
| 10928761 | Fn1 | Fibronectin 1 | 2.37 | n.s. | 2.23 |
| 10939901 | Gpr101 | G protein-coupled receptor 101 (Gpr101) | n.s. | 1.83 | 0.54 |
| 10804221 | Gpr151 | G protein-coupled receptor 151 | n.s. | 1.82 | n.s. |
| 10825915 | Gstm2 | Glutathione S-transferase mu 2 | 1.78 | n.s. | n.s. |
| 10806122 | Hmox1 | Hemeoxygenase (decycling) 1 | 1.98 | n.s. | 5.90 |
| 10937302 | Htr2c | 5-hydroxytryptamine (serotonin) receptor 2C | 1.90 | 0.46 | |
| 10841693 | Lbp | Lipopolysaccharide binding protein | 2.19 | n.s. | 1.94 |
| 10791250 | Lpl | Lipoprotein lipase | 1.55 | 1.71 | 0.56 |
| 10874918 | Lymphocyte antigen 96 | 1.51 | n.s. | 2.63 | |
| 10859392 | Mgst1 | Microsomal glutathione S-transferase 1 | 1.67 | n.s. | 1.72 |
| 10842239 | Mmp9 | Matrix metallopeptidase 9 | 1.85 | n.s. | n.s. |
| 10907869 | Mmp12 | Matrix metallopeptidase 12 | 1.91 | n.s. | 5.62 |
| 10780205 | Mmp14 | Matrix metallopeptidase 14 (membrane-inserted) | 1.60 | n.s. | 1.79 |
| 10893231 | Mmp19 | Matrix metallopeptidase 19 | 1.51 | n.s. | 2.91 |
| 10788427 | Msr1 | Macrophage scavenger receptor 1 | 2.53 | n.s. | 3.36 |
| 10821698 | Osmr | Oncostatin M receptor | 1.51 | n.s. | 3.69 |
| 10860867 | Pon1 | Paraoxonase 1 | 3.55 | 3.53 | n.s. |
| 10860878 | Pon3 | Paraoxonase 3 | 1.79 | n.s. | n.s. |
| 10873341 | Pla2g2a | Phospholipase A2, group IIA | 1.61 | n.s. | n.s. |
| 10873336 | Pla2g2d | Phospholipase A2, group IID | 2.17 | n.s. | n.s. |
| 10751295 | Pla1a | Phospholipase A1 member A | 1.70 | n.s. | 1.68 |
| 10782271 | Plau | Plasminogen activator, urokinase | 1.70 | n.s. | 4.36 |
| 10823819 | Rxfp1 | Relaxin/insulin-like family peptide receptor 1 | n.s. | 0.62 | n.s. |
| 10912439 | Rbp1 | Retinol binding protein 1, cellular | 1.81 | n.s. | 1.54 |
| 10761047 | Serpine1 | Serpin peptidase inhibitor, clade E, member 1 | 2.71 | n.s. | n.s. |
| 10819139 | Tacr3 | Tachykinin receptor 3 | 0.56 | 0.62 | n.s. |
A rat gene symbol was not provided by the Affymetrix annotation file for this transcript, however, IPA identified a human ortholog. Therefore, the gene symbol for the human ortholog is listed here.
Figure 6TaqMan based RT-PCR validation of the microarray data for the selected genes: Alox15 (arachidonate 15-lipoxygenase), Casp12 (caspase 12), CD68 (CD 68 molecule), Cyp1b1 (cytochrome P450 1b1), Gal (galanin), Hmox1 (hemeoxygenase 1), IGF2 (insulin like growth factor 2), IL1rn (interleukin 1 receptor antagonist), Mdk (midkine), Mmp9 (matrix metallopeptidase 9), Niacr1 (niacin receptor 1), S100a9 (S100 calcium binding protein A9), Xdh (xanthine dehydrogenase). The RT-PCR data was normalized to the housekeeping gene β-actin. Pearson's coefficient, r = 0.859.