Literature DB >> 24147738

Synthetic biology in plastids.

Lars B Scharff1, Ralph Bock.   

Abstract

Plastids (chloroplasts) harbor a small gene-dense genome that is amenable to genetic manipulation by transformation. During 1 billion years of evolution from the cyanobacterial endosymbiont to present-day chloroplasts, the plastid genome has undergone a dramatic size reduction, mainly as a result of gene losses and the large-scale transfer of genes to the nuclear genome. Thus the plastid genome can be regarded as a naturally evolved miniature genome, the gradual size reduction and compaction of which has provided a blueprint for the design of minimum genomes. Furthermore, because of the largely prokaryotic genome structure and gene expression machinery, the high transgene expression levels attainable in transgenic chloroplasts and the very low production costs in plant systems, the chloroplast lends itself to synthetic biology applications that are directed towards the efficient synthesis of green chemicals, biopharmaceuticals and other metabolites of commercial interest. This review describes recent progress with the engineering of plastid genomes with large constructs of foreign or synthetic DNA, and highlights the potential of the chloroplast as a model system in bottom-up and top-down synthetic biology approaches.
© 2013 The Authors The Plant Journal © 2013 John Wiley & Sons Ltd.

Entities:  

Keywords:  chloroplast; metabolic engineering; plastid transformation; reverse genetics; synthetic biology; synthetic genomics

Mesh:

Year:  2013        PMID: 24147738     DOI: 10.1111/tpj.12356

Source DB:  PubMed          Journal:  Plant J        ISSN: 0960-7412            Impact factor:   6.417


  32 in total

1.  Plastid Transformation in Tomato: A Vegetable Crop and Model Species.

Authors:  Stephanie Ruf; Ralph Bock
Journal:  Methods Mol Biol       Date:  2021

2.  Transformation of the Plastid Genome in Tobacco: The Model System for Chloroplast Genome Engineering.

Authors:  Pal Maliga; Tarinee Tungsuchat-Huang; Kerry Ann Lutz
Journal:  Methods Mol Biol       Date:  2021

3.  Engineering Chloroplasts for High-Level Constitutive or Inducible Transgene Expression.

Authors:  Ralph Bock
Journal:  Methods Mol Biol       Date:  2021

Review 4.  Synthetic Botany.

Authors:  Christian R Boehm; Bernardo Pollak; Nuri Purswani; Nicola Patron; Jim Haseloff
Journal:  Cold Spring Harb Perspect Biol       Date:  2017-07-05       Impact factor: 10.005

Review 5.  Manipulation of the microalgal chloroplast by genetic engineering for biotechnological utilization as a green biofactory.

Authors:  Yong Min Kwon; Kyung Woo Kim; Tae-Young Choi; Sun Young Kim; Jaoon Young Hwan Kim
Journal:  World J Microbiol Biotechnol       Date:  2018-11-26       Impact factor: 3.312

6.  Spontaneous Chloroplast Mutants Mostly Occur by Replication Slippage and Show a Biased Pattern in the Plastome of Oenothera.

Authors:  Amid Massouh; Julia Schubert; Liliya Yaneva-Roder; Elena S Ulbricht-Jones; Arkadiusz Zupok; Marc T J Johnson; Stephen I Wright; Tommaso Pellizzer; Johanna Sobanski; Ralph Bock; Stephan Greiner
Journal:  Plant Cell       Date:  2016-04-06       Impact factor: 11.277

7.  Structure and features of the complete chloroplast genome of Melastoma dodecandrum.

Authors:  Xiasheng Zheng; Changwei Ren; Song Huang; Jing Li; Ying Zhao
Journal:  Physiol Mol Biol Plants       Date:  2019-03-12

8.  Plastome Mutations and Recombination Events in Barley Chloroplast Mutator Seedlings.

Authors:  Alejandra Landau; Franco Lencina; María G Pacheco; Alberto R Prina
Journal:  J Hered       Date:  2016-01-16       Impact factor: 2.645

9.  Comparative analyses of chloroplast genomes from 13 Lagerstroemia (Lythraceae) species: identification of highly divergent regions and inference of phylogenetic relationships.

Authors:  Gang Zheng; Lingling Wei; Li Ma; Zhiqiang Wu; Cuihua Gu; Kai Chen
Journal:  Plant Mol Biol       Date:  2020-01-29       Impact factor: 4.076

10.  Purine nucleotide biosynthetic gene GARS controls early chloroplast development in rice (Oryza sativa L.).

Authors:  Penghui Cao; Yakun Ren; Xi Liu; Tianyu Zhang; Ping Zhang; Lianjie Xiao; Fulin Zhang; Shijia Liu; Ling Jiang; Jianmin Wan
Journal:  Plant Cell Rep       Date:  2018-11-29       Impact factor: 4.570

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