| Literature DB >> 24140490 |
Yong-Zhen Huang1, Zhao-Yang Zhan1, Yu-Jia Sun1, Xiu-Kai Cao1, Ming-Xun Li1, Jing Wang1, Xian-Yong Lan1, Chu-Zhao Lei1, Chun-Lei Zhang2, Hong Chen3.
Abstract
DNA methylation is a key epigenetic modification in mammals and has an essential and important role in muscle development. Insulin-like growth factor 2 (IGF2) is a fetal growth and differentiation factor that plays an important role in muscle growth and in myoblast proliferation and differentiation. The aim of this study was to evaluate the expression of IGF2 and the methylation pattern on the differentially methylated region (DMR) of the last exon of IGF2 in six tissues with two different developmental stages. The DNA methylation pattern was compared using bisulfite sequencing polymerase chain reaction (BSP) and combined bisulfite restriction analysis (COBRA). The quantitative real-time PCR (qPCR) analysis indicated that IGF2 has a broad tissue distribution and the adult bovine group showed significant lower mRNA expression levels than that in the fetal bovine group (P<0.05 or P<0.01). Moreover, the DNA methylation level analysis showed that the adult bovine group exhibited a significantly higher DNA methylation levels than that in the fetal bovine group (P<0.05 or P<0.01). These results indicate that IGF2 expression levels were negatively associated with the methylation status of the IGF2 DMR during the two developmental stages. Our results suggest that the methylation pattern in this DMR may be a useful parameter to investigate as a marker-assisted selection for muscle developmental in beef cattle breeding program and as a model for studies in other species.Entities:
Keywords: 3’-UTRs; AB; ANOVA; BSP; Bisulfite sequencing PCR; CCCTC binding factor; COBRA; CTCF; Cattle; Complementary DNA; CpG; Cyt osineguan inedinucleotide; DMR; DNA methylation; FB; H19; IGF2; Insulin-like growth factor 2; LDM; QTLs; QUMA; SEM; SPSS; TSS; TTS; adult bovine; analysis of variance; base pair(s); bp; cDNA; combined bisulfite restriction analysis; differentially methylated region; fetal bovine; histocompatibility gene; longissimus dorsi muscle; miRNA; microRNA; qPCR; quantification tool for methylation analysis; quantitative real-time PCR; quantitative trait locus; regulation at the 3’ untranslated regions; standard error; statistical product and service solutions; the transcription termination site; transcription start site
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Year: 2013 PMID: 24140490 DOI: 10.1016/j.gene.2013.09.111
Source DB: PubMed Journal: Gene ISSN: 0378-1119 Impact factor: 3.688