Literature DB >> 24139652

Realistic modeling of neurons and networks: towards brain simulation.

Egidio D'Angelo, Sergio Solinas, Jesus Garrido, Claudia Casellato, Alessandra Pedrocchi, Jonathan Mapelli, Daniela Gandolfi, Francesca Prestori.   

Abstract

Realistic modeling is a new advanced methodology for investigating brain functions. Realistic modeling is based on a detailed biophysical description of neurons and synapses, which can be integrated into microcircuits. The latter can, in turn, be further integrated to form large-scale brain networks and eventually to reconstruct complex brain systems. Here we provide a review of the realistic simulation strategy and use the cerebellar network as an example. This network has been carefully investigated at molecular and cellular level and has been the object of intense theoretical investigation. The cerebellum is thought to lie at the core of the forward controller operations of the brain and to implement timing and sensory prediction functions. The cerebellum is well described and provides a challenging field in which one of the most advanced realistic microcircuit models has been generated. We illustrate how these models can be elaborated and embedded into robotic control systems to gain insight into how the cellular properties of cerebellar neurons emerge in integrated behaviors. Realistic network modeling opens up new perspectives for the investigation of brain pathologies and for the neurorobotic field.

Mesh:

Year:  2013        PMID: 24139652      PMCID: PMC3812748          DOI: 10.11138/FNeur/2013.28.3.153

Source DB:  PubMed          Journal:  Funct Neurol        ISSN: 0393-5264


  62 in total

1.  Theta-frequency bursting and resonance in cerebellar granule cells: experimental evidence and modeling of a slow k+-dependent mechanism.

Authors:  E D'Angelo; T Nieus; A Maffei; S Armano; P Rossi; V Taglietti; A Fontana; G Naldi
Journal:  J Neurosci       Date:  2001-02-01       Impact factor: 6.167

Review 2.  Computer simulation of cerebellar information processing.

Authors:  J F Medina; M D Mauk
Journal:  Nat Neurosci       Date:  2000-11       Impact factor: 24.884

3.  The cerebellum and the timing of coordinated eye and hand tracking.

Authors:  R C Miall; G Z Reckess
Journal:  Brain Cogn       Date:  2002-02       Impact factor: 2.310

4.  How synaptic release probability shapes neuronal transmission: information-theoretic analysis in a cerebellar granule cell.

Authors:  Angelo Arleo; Thierry Nieus; Michele Bezzi; Anna D'Errico; Egidio D'Angelo; Olivier J-M D Coenen
Journal:  Neural Comput       Date:  2010-08       Impact factor: 2.026

Review 5.  The cerebellar network: from structure to function and dynamics.

Authors:  E D'Angelo; P Mazzarello; F Prestori; J Mapelli; S Solinas; P Lombardo; E Cesana; D Gandolfi; L Congi
Journal:  Brain Res Rev       Date:  2010-10-13

Review 6.  The blue brain project.

Authors:  Henry Markram
Journal:  Nat Rev Neurosci       Date:  2006-02       Impact factor: 34.870

Review 7.  Timing and plasticity in the cerebellum: focus on the granular layer.

Authors:  Egidio D'Angelo; Chris I De Zeeuw
Journal:  Trends Neurosci       Date:  2008-10-30       Impact factor: 13.837

Review 8.  Seven challenges for neuroscience.

Authors:  Henry Markram
Journal:  Funct Neurol       Date:  2013 Jul-Sep

9.  An active membrane model of the cerebellar Purkinje cell. I. Simulation of current clamps in slice.

Authors:  E De Schutter; J M Bower
Journal:  J Neurophysiol       Date:  1994-01       Impact factor: 2.714

10.  Internal models in the cerebellum.

Authors:  D M Wolpert; R C Miall; M Kawato
Journal:  Trends Cogn Sci       Date:  1998-09-01       Impact factor: 20.229

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  16 in total

1.  Functional neurology of a brain system: a 3D olfactory bulb model to process natural odorants.

Authors:  Michele Migliore; Francesco Cavarretta; Michael L Hines; Gordon M Shepherd
Journal:  Funct Neurol       Date:  2013 Jul-Sep

Review 2.  The Human Brain Project and neuromorphic computing.

Authors:  Andrea Calimera; Enrico Macii; Massimo Poncino
Journal:  Funct Neurol       Date:  2013 Jul-Sep

Review 3.  The connectomics challenge.

Authors:  Ludovico Silvestri; Leonardo Sacconi; Francesco Saverio Pavone
Journal:  Funct Neurol       Date:  2013 Jul-Sep

Review 4.  3D in vitro modeling of the central nervous system.

Authors:  Amy M Hopkins; Elise DeSimone; Karolina Chwalek; David L Kaplan
Journal:  Prog Neurobiol       Date:  2014-11-22       Impact factor: 11.685

Review 5.  Brain investigation and brain conceptualization.

Authors:  Alberto Redolfi; Paolo Bosco; David Manset; Giovanni B Frisoni
Journal:  Funct Neurol       Date:  2013 Jul-Sep

Review 6.  A hypothalamomedullary network for physiological responses to environmental stresses.

Authors:  Kazuhiro Nakamura; Yoshiko Nakamura; Naoya Kataoka
Journal:  Nat Rev Neurosci       Date:  2021-11-02       Impact factor: 34.870

7.  Adaptive robotic control driven by a versatile spiking cerebellar network.

Authors:  Claudia Casellato; Alberto Antonietti; Jesus A Garrido; Richard R Carrillo; Niceto R Luque; Eduardo Ros; Alessandra Pedrocchi; Egidio D'Angelo
Journal:  PLoS One       Date:  2014-11-12       Impact factor: 3.240

8.  Distributed cerebellar plasticity implements generalized multiple-scale memory components in real-robot sensorimotor tasks.

Authors:  Claudia Casellato; Alberto Antonietti; Jesus A Garrido; Giancarlo Ferrigno; Egidio D'Angelo; Alessandra Pedrocchi
Journal:  Front Comput Neurosci       Date:  2015-02-25       Impact factor: 2.380

9.  Differential involvement of cortical and cerebellar areas using dominant and nondominant hands: An FMRI study.

Authors:  Adnan A S Alahmadi; Matteo Pardini; Rebecca S Samson; Egidio D'Angelo; Karl J Friston; Ahmed T Toosy; Claudia A M Gandini Wheeler-Kingshott
Journal:  Hum Brain Mapp       Date:  2015-09-29       Impact factor: 5.038

Review 10.  Modeling the Cerebellar Microcircuit: New Strategies for a Long-Standing Issue.

Authors:  Egidio D'Angelo; Alberto Antonietti; Stefano Casali; Claudia Casellato; Jesus A Garrido; Niceto Rafael Luque; Lisa Mapelli; Stefano Masoli; Alessandra Pedrocchi; Francesca Prestori; Martina Francesca Rizza; Eduardo Ros
Journal:  Front Cell Neurosci       Date:  2016-07-08       Impact factor: 5.505

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