Literature DB >> 24134127

Four-way junction-driven DNA strand displacement and its application in building majority logic circuit.

Jinbo Zhu1, Libing Zhang, Shaojun Dong, Erkang Wang.   

Abstract

We introduced a four-way DNA junction-driven toehold-mediated strand displacement method. Separation of the different functional domains on different strands in the four-way junction structure and usage of glue strand to recombine them for different logic gates make the design more flexible. On the basis of this mechanism, a majority logic circuit fabricated by DNA strands was designed and constructed by assembling three AND gates and one OR gate together. The output strand drew the G-rich segments together to form a split G-quadruplex, which could specifically bind PPIX and enhance its fluorescence. Just like a poll with three voters, the high fluorescence signal would be given off only when two or three voters vote in favor. Upon slight modification, the majority circuit was utilized to select the composite number from 0 to 9 represented by excess-three code. It is a successful attempt to integrate the logic gates into a circuit and to achieve desired functions.

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Year:  2013        PMID: 24134127     DOI: 10.1021/nn4044854

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  15 in total

1.  Divide and control: split design of multi-input DNA logic gates.

Authors:  Yulia V Gerasimova; Dmitry M Kolpashchikov
Journal:  Chem Commun (Camb)       Date:  2014-11-27       Impact factor: 6.222

2.  A DNA-based parity generator/checker for error detection through data transmission with visual readout and an output-correction function.

Authors:  Daoqing Fan; Erkang Wang; Shaojun Dong
Journal:  Chem Sci       Date:  2016-10-26       Impact factor: 9.825

3.  DNA-based visual majority logic gate with one-vote veto function.

Authors:  Daoqing Fan; Kun Wang; Jinbo Zhu; Yong Xia; Yanchao Han; Yaqing Liu; Erkang Wang
Journal:  Chem Sci       Date:  2015-01-07       Impact factor: 9.825

4.  Multiple advanced logic gates made of DNA-Ag nanocluster and the application for intelligent detection of pathogenic bacterial genes.

Authors:  Xiaodong Lin; Yaqing Liu; Jiankang Deng; Yanlong Lyu; Pengcheng Qian; Yunfei Li; Shuo Wang
Journal:  Chem Sci       Date:  2018-01-08       Impact factor: 9.825

5.  A label-free and enzyme-free platform with a visible output for constructing versatile logic gates using caged G-quadruplex as the signal transducer.

Authors:  Junhua Chen; Jiafeng Pan; Shu Chen
Journal:  Chem Sci       Date:  2017-10-20       Impact factor: 9.825

6.  DNA cross-triggered cascading self-amplification artificial biochemical circuit.

Authors:  Ji Nie; Ming-Zhe Zhao; Wen Jun Xie; Liang-Yuan Cai; Ying-Lin Zhou; Xin-Xiang Zhang
Journal:  Chem Sci       Date:  2014-11-07       Impact factor: 9.825

7.  How to split a G-quadruplex for DNA detection: new insight into the formation of DNA split G-quadruplex.

Authors:  Jinbo Zhu; Libing Zhang; Shaojun Dong; Erkang Wang
Journal:  Chem Sci       Date:  2015-06-02       Impact factor: 9.825

8.  One-time-pad cryptography scheme based on a three-dimensional DNA self-assembly pyramid structure.

Authors:  Weiping Peng; Danhua Cheng; Cheng Song
Journal:  PLoS One       Date:  2018-11-06       Impact factor: 3.240

9.  Target-driven DNA association to initiate cyclic assembly of hairpins for biosensing and logic gate operation.

Authors:  Yuehua Guo; Jie Wu; Huangxian Ju
Journal:  Chem Sci       Date:  2015-05-12       Impact factor: 9.825

10.  Implementation of cascade logic gates and majority logic gate on a simple and universal molecular platform.

Authors:  Jinting Gao; Yaqing Liu; Xiaodong Lin; Jiankang Deng; Jinjin Yin; Shuo Wang
Journal:  Sci Rep       Date:  2017-10-25       Impact factor: 4.379

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