Literature DB >> 24129752

Nitrogenase: a general hydrogenator of small molecules.

Ian Dance1.   

Abstract

Nitrogenase naturally converts N2 to NH3, but it also hydrogenates a variety of small molecules, in many cases requiring multiple electrons plus protons for each catalytic cycle. A general mechanism, arising from many density functional calculations and simulations, is proposed to account for all of these reactions. Protons, supplied serially in conjunction with electrons to the active site FeMo-co (a CFe7MoS9 (homocitrate) cluster), generate H atoms that migrate over and populate two S and two Fe atoms in the reaction domain. The mechanistic paradigm is conceptually straightforward: substrate (on Fe) and H atoms (on S and Fe) are bound contiguously in the reaction zone, and H atoms transfer (probably with some quantum tunneling) to the substrate to form product. Details and justifications of the mechanisms for N2 and other key substrates are summarised, and the unusual structure of FeMo-co as a general hydrogenation catalyst is rationalised. Testing experiments are suggested.

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Year:  2013        PMID: 24129752     DOI: 10.1039/c3cc46864j

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN: 1359-7345            Impact factor:   6.222


  12 in total

1.  Testing the Push-Pull Hypothesis: Lewis Acid Augmented N2 Activation at Iron.

Authors:  Jacob B Geri; James P Shanahan; Nathaniel K Szymczak
Journal:  J Am Chem Soc       Date:  2017-04-17       Impact factor: 15.419

2.  α-Hydroxy coordination of mononuclear vanadyl citrate, malate and S-citramalate with N-heterocycle ligand, implying a new protonation pathway of iron-vanadium cofactor in nitrogenase.

Authors:  Can-Yu Chen; Mao-Long Chen; Hong-Bin Chen; Hongxin Wang; Stephen P Cramer; Zhao-Hui Zhou
Journal:  J Inorg Biochem       Date:  2014-08-11       Impact factor: 4.155

3.  Low frequency dynamics of the nitrogenase MoFe protein via femtosecond pump probe spectroscopy - Observation of a candidate promoting vibration.

Authors:  Margherita Maiuri; Ines Delfino; Giulio Cerullo; Cristian Manzoni; Vladimir Pelmenschikov; Yisong Guo; Hongxin Wang; Leland B Gee; Christie H Dapper; William E Newton; Stephen P Cramer
Journal:  J Inorg Biochem       Date:  2015-07-14       Impact factor: 4.155

4.  Substrate pathways in the nitrogenase MoFe protein by experimental identification of small molecule binding sites.

Authors:  Christine N Morrison; Julie A Hoy; Limei Zhang; Oliver Einsle; Douglas C Rees
Journal:  Biochemistry       Date:  2015-03-09       Impact factor: 3.162

5.  What is the trigger mechanism for the reversal of electron flow in oxygen-tolerant [NiFe] hydrogenases?

Authors:  Ian Dance
Journal:  Chem Sci       Date:  2014-12-08       Impact factor: 9.825

6.  Nitrogen Reduction to Ammonia on a Biomimetic Mononuclear Iron Centre: Insights into the Nitrogenase Enzyme.

Authors:  Monika A Kaczmarek; Abheek Malhotra; G Alex Balan; Amy Timmins; Sam P de Visser
Journal:  Chemistry       Date:  2017-12-14       Impact factor: 5.236

7.  A molecular pathway for the egress of ammonia produced by nitrogenase.

Authors:  Ian Dance
Journal:  Sci Rep       Date:  2013-11-18       Impact factor: 4.379

Review 8.  Mechanism of nitrogen fixation by nitrogenase: the next stage.

Authors:  Brian M Hoffman; Dmitriy Lukoyanov; Zhi-Yong Yang; Dennis R Dean; Lance C Seefeldt
Journal:  Chem Rev       Date:  2014-01-27       Impact factor: 60.622

9.  Streptomyces thermoautotrophicus does not fix nitrogen.

Authors:  Drew MacKellar; Lucas Lieber; Jeffrey S Norman; Anthony Bolger; Cory Tobin; James W Murray; Mehtap Oksaksin; Roger L Chang; Tyler J Ford; Peter Q Nguyen; Jimmy Woodward; Hugo R Permingeat; Neel S Joshi; Pamela A Silver; Björn Usadel; Alfred W Rutherford; Maren L Friesen; Jürgen Prell
Journal:  Sci Rep       Date:  2016-02-01       Impact factor: 4.379

10.  Pyrene hydrogel for promoting direct bioelectrochemistry: ATP-independent electroenzymatic reduction of N2.

Authors:  David P Hickey; Koun Lim; Rong Cai; Ashlea R Patterson; Mengwei Yuan; Selmihan Sahin; Sofiene Abdellaoui; Shelley D Minteer
Journal:  Chem Sci       Date:  2018-05-14       Impact factor: 9.825

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