Literature DB >> 24126635

Robertkochia marina gen. nov., sp. nov., of the family Flavobacteriaceae, isolated from surface seawater, and emended descriptions of the genera Joostella and Galbibacter.

Asif Hameed1, Mariyam Shahina1, Shih-Yao Lin1, Wei-An Lai1, You-Cheng Liu1, Yi-Han Hsu1, I-Chen Cheng1, Chiu-Chung Young2,1.   

Abstract

A Gram-staining-negative, orange-pigmented, strictly aerobic, carotenoid-producing, rod-shaped, non-flagellated, non-spore-forming bacterium, motile by gliding, designated strain CC-AMO-30D(T), was isolated from surface seawater collected near Taichung harbour, Taiwan. Strain CC-AMO-30D(T) shared pairwise 16S rRNA gene sequence similarities of 94.8, 93.7 and 92.5% with the type strains of the type species of the genera Joostella, Pustulibacterium and Galbibacter, respectively, and formed a distinct monophyletic lineage in phylogenetic trees. The major fatty acids (≥ 5% of total) were iso-C15 : 1 G, iso-C15 : 0, iso-C17 : 0 3-OH, iso-C15 : 0 3-OH, iso-C16 : 0 and anteiso-C15 : 0. The polar lipid profile consisted of phosphatidylethanolamine, four unidentified lipids, two unidentified aminolipids and an unidentified phospholipid. The major polyamine was the triamine sym-homospermidine. The DNA G+C content was 47.1 mol% and the predominant respiratory quinone was menaquinone-6 (MK-6). Based on the phylogenetic distinctiveness and distinguishing phenotypic characteristics, strain CC-AMO-30D(T) represents a novel genus and species of the family Flavobacteriaceae, for which the name Robertkochia marina gen. nov., sp. nov. is proposed; the type strain of the type species Robertkochia marina is CC-AMO-30D(T) ( = JCM 18552(T) = BCRC 80469(T)). Emended descriptions of the genera Joostella and Galbibacter are also proposed.

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Year:  2013        PMID: 24126635     DOI: 10.1099/ijs.0.054627-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  6 in total

1.  Genome sequence of an uncharted halophilic bacterium Robertkochia marina with deciphering its phosphate-solubilizing ability.

Authors:  Ming Quan Lam; Sye Jinn Chen; Kian Mau Goh; Fazilah Abd Manan; Adibah Yahya; Mohd Shahir Shamsir; Chun Shiong Chong
Journal:  Braz J Microbiol       Date:  2020-11-03       Impact factor: 2.476

2.  Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes.

Authors:  Marina García-López; Jan P Meier-Kolthoff; Brian J Tindall; Sabine Gronow; Tanja Woyke; Nikos C Kyrpides; Richard L Hahnke; Markus Göker
Journal:  Front Microbiol       Date:  2019-09-23       Impact factor: 5.640

3.  Robertkochia sediminum sp. nov., isolated from coastal sediment.

Authors:  Lu Ma; Shao-Juan Du; Ya Gong; Zong-Jun Du
Journal:  Arch Microbiol       Date:  2021-12-09       Impact factor: 2.552

4.  Microbial diversity in tropical marine sediments assessed using culture-dependent and culture-independent techniques.

Authors:  Alyssa M Demko; Nastassia V Patin; Paul R Jensen
Journal:  Environ Microbiol       Date:  2021-10-11       Impact factor: 5.491

5.  Biosurfactant activity, heavy metal tolerance and characterization of Joostella strain A8 from the Mediterranean polychaete Megalomma claparedei (Gravier, 1906).

Authors:  Carmen Rizzo; Luigi Michaud; Marco Graziano; Emilio De Domenico; Christoph Syldatk; Rudolf Hausmann; Angelina Lo Giudice
Journal:  Ecotoxicology       Date:  2015-06-10       Impact factor: 2.823

6.  Luteirhabdus pelagi gen. nov., sp. nov., a novel member of the family Flavobacteriaceae, isolated from the West Pacific Ocean.

Authors:  Wen-Ting Ren; Fan-Xu Meng; Li-Li Guo; Li Sun; Xue-Wei Xu; Peng Zhou; Yue-Hong Wu
Journal:  Arch Microbiol       Date:  2021-10-26       Impact factor: 2.552

  6 in total

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