Literature DB >> 24122795

Molecular pathways: SWI/SNF (BAF) complexes are frequently mutated in cancer--mechanisms and potential therapeutic insights.

Xiaofeng Wang1, Jeffrey R Haswell, Charles W M Roberts.   

Abstract

SWI/SNF chromatin remodeling complexes are pleomorphic multisubunit cellular machines that utilize the energy of ATP hydrolysis to modulate chromatin structure. The complexes interact with transcription factors at promoters and enhancers to modulate gene expression and contribute to lineage specification, differentiation, and development. Initial clues to a role in tumor suppression for SWI/SNF complexes came over a decade ago when the gene encoding the SMARCB1/SNF5 core subunit was found specifically inactivated in nearly all pediatric rhabdoid tumors. In the last three years, cancer-genome sequencing efforts have revealed an unexpectedly high mutation rate of SWI/SNF subunit genes, which are collectively mutated in 20% of all human cancers and approach the frequency of p53 mutations. Here, we provide a background on these newly recognized tumor suppressor complexes, discuss mechanisms implicated in the tumor suppressor activity, and highlight findings that may lead to potential therapeutic targets for SWI/SNF-mutant cancers.

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Year:  2013        PMID: 24122795      PMCID: PMC3947303          DOI: 10.1158/1078-0432.CCR-13-0280

Source DB:  PubMed          Journal:  Clin Cancer Res        ISSN: 1078-0432            Impact factor:   12.531


  81 in total

1.  Regulation of nucleosome landscape and transcription factor targeting at tissue-specific enhancers by BRG1.

Authors:  Gangqing Hu; Dustin E Schones; Kairong Cui; River Ybarra; Daniel Northrup; Qingsong Tang; Luca Gattinoni; Nicholas P Restifo; Suming Huang; Keji Zhao
Journal:  Genome Res       Date:  2011-07-27       Impact factor: 9.043

2.  Exome sequencing identifies frequent mutation of ARID1A in molecular subtypes of gastric cancer.

Authors:  Kai Wang; Junsuo Kan; Siu Tsan Yuen; Stephanie T Shi; Kent Man Chu; Simon Law; Tsun Leung Chan; Zhengyan Kan; Annie S Y Chan; Wai Yin Tsui; Siu Po Lee; Siu Lun Ho; Anthony K W Chan; Grace H W Cheng; Peter C Roberts; Paul A Rejto; Neil W Gibson; David J Pocalyko; Mao Mao; Jiangchun Xu; Suet Yi Leung
Journal:  Nat Genet       Date:  2011-10-30       Impact factor: 38.330

3.  p16INK4A and p14ARF tumor suppressor pathways are deregulated in malignant rhabdoid tumors.

Authors:  Sriram Venneti; Paul Le; Daniel Martinez; Katherine W Eaton; Nikhil Shyam; Kelly L Jordan-Sciutto; Bruce Pawel; Jaclyn A Biegel; Alexander R Judkins
Journal:  J Neuropathol Exp Neurol       Date:  2011-07       Impact factor: 3.685

4.  TCR-dependent transformation of mature memory phenotype T cells in mice.

Authors:  Xi Wang; Miriam B F Werneck; Boris G Wilson; Hye-Jung Kim; Michael J Kluk; Christopher S Thom; Jonathan W Wischhusen; Julia A Evans; Jonathan L Jesneck; Phuong Nguyen; Courtney G Sansam; Harvey Cantor; Charles W M Roberts
Journal:  J Clin Invest       Date:  2011-09-19       Impact factor: 14.808

Review 5.  SWI/SNF nucleosome remodellers and cancer.

Authors:  Boris G Wilson; Charles W M Roberts
Journal:  Nat Rev Cancer       Date:  2011-06-09       Impact factor: 60.716

Review 6.  ATP-dependent chromatin remodeling: genetics, genomics and mechanisms.

Authors:  Diana C Hargreaves; Gerald R Crabtree
Journal:  Cell Res       Date:  2011-03-01       Impact factor: 25.617

7.  Frequent mutations of chromatin remodeling genes in transitional cell carcinoma of the bladder.

Authors:  Yaoting Gui; Guangwu Guo; Yi Huang; Xueda Hu; Aifa Tang; Shengjie Gao; Renhua Wu; Chao Chen; Xianxin Li; Liang Zhou; Minghui He; Zesong Li; Xiaojuan Sun; Wenlong Jia; Jinnong Chen; Shangming Yang; Fangjian Zhou; Xiaokun Zhao; Shengqing Wan; Rui Ye; Chaozhao Liang; Zhisheng Liu; Peide Huang; Chunxiao Liu; Hui Jiang; Yong Wang; Hancheng Zheng; Liang Sun; Xingwang Liu; Zhimao Jiang; Dafei Feng; Jing Chen; Song Wu; Jing Zou; Zhongfu Zhang; Ruilin Yang; Jun Zhao; Congjie Xu; Weihua Yin; Zhichen Guan; Jiongxian Ye; Hong Zhang; Jingxiang Li; Karsten Kristiansen; Michael L Nickerson; Dan Theodorescu; Yingrui Li; Xiuqing Zhang; Songgang Li; Jian Wang; Huanming Yang; Jun Wang; Zhiming Cai
Journal:  Nat Genet       Date:  2011-08-07       Impact factor: 38.330

8.  The chromatin-remodeling enzyme BRG1 modulates vascular Wnt signaling at two levels.

Authors:  Courtney T Griffin; Carol D Curtis; Reema B Davis; Vijay Muthukumar; Terry Magnuson
Journal:  Proc Natl Acad Sci U S A       Date:  2011-01-24       Impact factor: 11.205

9.  Convergent structural alterations define SWItch/Sucrose NonFermentable (SWI/SNF) chromatin remodeler as a central tumor suppressive complex in pancreatic cancer.

Authors:  A Hunter Shain; Craig P Giacomini; Karen Matsukuma; Collins A Karikari; Murali D Bashyam; Manuel Hidalgo; Anirban Maitra; Jonathan R Pollack
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-10       Impact factor: 11.205

10.  Exome sequencing identifies frequent mutation of the SWI/SNF complex gene PBRM1 in renal carcinoma.

Authors:  Ignacio Varela; Patrick Tarpey; Keiran Raine; Dachuan Huang; Choon Kiat Ong; Philip Stephens; Helen Davies; David Jones; Meng-Lay Lin; Jon Teague; Graham Bignell; Adam Butler; Juok Cho; Gillian L Dalgliesh; Danushka Galappaththige; Chris Greenman; Claire Hardy; Mingming Jia; Calli Latimer; King Wai Lau; John Marshall; Stuart McLaren; Andrew Menzies; Laura Mudie; Lucy Stebbings; David A Largaespada; L F A Wessels; Stephane Richard; Richard J Kahnoski; John Anema; David A Tuveson; Pedro A Perez-Mancera; Ville Mustonen; Andrej Fischer; David J Adams; Alistair Rust; Waraporn Chan-on; Chutima Subimerb; Karl Dykema; Kyle Furge; Peter J Campbell; Bin Tean Teh; Michael R Stratton; P Andrew Futreal
Journal:  Nature       Date:  2011-01-19       Impact factor: 49.962

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  52 in total

1.  Arid1a inactivation in an Apc- and Pten-defective mouse ovarian cancer model enhances epithelial differentiation and prolongs survival.

Authors:  Yali Zhai; Rork Kuick; Courtney Tipton; Rong Wu; Michael Sessine; Zhong Wang; Suzanne J Baker; Eric R Fearon; Kathleen R Cho
Journal:  J Pathol       Date:  2015-09-15       Impact factor: 7.996

Review 2.  Timing and Targeting of Treatment in Left Ventricular Hypertrophy.

Authors:  Deokhwa Nam; Erin L Reineke
Journal:  Methodist Debakey Cardiovasc J       Date:  2017 Jan-Mar

Review 3.  SWI/SNF chromatin remodeling complexes and cancer.

Authors:  Jaclyn A Biegel; Tracy M Busse; Bernard E Weissman
Journal:  Am J Med Genet C Semin Med Genet       Date:  2014-08-28       Impact factor: 3.908

Review 4.  The recurrent architecture of tumour initiation, progression and drug sensitivity.

Authors:  Andrea Califano; Mariano J Alvarez
Journal:  Nat Rev Cancer       Date:  2016-12-15       Impact factor: 60.716

5.  The forkhead box M1 (FOXM1) expression and antitumor effect of FOXM1 inhibition in malignant rhabdoid tumor.

Authors:  Yuichi Shibui; Kenichi Kohashi; Akihiko Tamaki; Izumi Kinoshita; Yuichi Yamada; Hidetaka Yamamoto; Tomoaki Taguchi; Yoshinao Oda
Journal:  J Cancer Res Clin Oncol       Date:  2020-11-21       Impact factor: 4.553

6.  Composition and Function of Mutant Swi/Snf Complexes.

Authors:  Arnob Dutta; Mihaela Sardiu; Madelaine Gogol; Joshua Gilmore; Daoyong Zhang; Laurence Florens; Susan M Abmayr; Michael P Washburn; Jerry L Workman
Journal:  Cell Rep       Date:  2017-02-28       Impact factor: 9.423

7.  High Frequency of Ovarian Cyst Development in Vhl2B/+;Snf5+/- Mice.

Authors:  Yasumichi Kuwahara; Leslie M Kennedy; Anthony N Karnezis; E Lorena Mora-Blanco; Arlin B Rogers; Christopher D Fletcher; David G Huntsman; Charles W M Roberts; W Kimryn Rathmell; Bernard E Weissman
Journal:  Am J Pathol       Date:  2018-04-22       Impact factor: 4.307

Review 8.  What is new in epithelioid soft tissue tumors?

Authors:  Abbas Agaimy
Journal:  Virchows Arch       Date:  2019-11-04       Impact factor: 4.064

Review 9.  A rationale to target the SWI/SNF complex for cancer therapy.

Authors:  Anja F Hohmann; Christopher R Vakoc
Journal:  Trends Genet       Date:  2014-06-03       Impact factor: 11.639

Review 10.  From melanocytes to melanomas.

Authors:  A Hunter Shain; Boris C Bastian
Journal:  Nat Rev Cancer       Date:  2016-04-29       Impact factor: 60.716

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