Literature DB >> 24122067

Analysis of complete genomes of isolates of the Wheat dwarf virus from new geographical locations and descriptions of their defective forms.

Jörg Schubert, Antje Habekuß, Beilei Wu, Thomas Thieme, Xifeng Wang.   

Abstract

Recently, the importance of the Geminiviruses infecting cereal crops has been appreciated, and they are now being studied in detail. Barley and wheat strains of Wheat dwarf virus are recorded in most European countries. Information on complete sequences of isolates from the United Kingdom, Spain, and Austria are reported here for the first time. Analysis revealed that their sequences are very stable. Recombination between strains was recorded only for the barley strain. We identified several defective forms of the barley strain from barley and wheat, which do not influence symptom expression. Sequences of barley isolates infecting wheat were obtained that did not differ from the isolates from barley. Based on specific features of the SIR of the barley strains, it is suggested that they are assigned to one of the two proposed new clusters, A1 or A2.

Entities:  

Mesh:

Substances:

Year:  2014        PMID: 24122067     DOI: 10.1007/s11262-013-0989-9

Source DB:  PubMed          Journal:  Virus Genes        ISSN: 0920-8569            Impact factor:   2.332


  22 in total

1.  Genetic diversity of Wheat dwarf virus.

Authors:  A Kvarnheden; M Lindblad; K Lindsten; J P T Valkonen
Journal:  Arch Virol       Date:  2002       Impact factor: 2.574

2.  Eragrostis minor streak virus: an Asian streak virus in Africa.

Authors:  Darren P Martin; Daphne Linderme; Pierre Lefeuvre; Dionne N Shepherd; Arvind Varsani
Journal:  Arch Virol       Date:  2011-05-26       Impact factor: 2.574

3.  A genome-wide pairwise-identity-based proposal for the classification of viruses in the genus Mastrevirus (family Geminiviridae).

Authors:  Brejnev Muhire; Darren P Martin; Judith K Brown; Jesús Navas-Castillo; Enrique Moriones; F Murilo Zerbini; Rafael Rivera-Bustamante; V G Malathi; Rob W Briddon; Arvind Varsani
Journal:  Arch Virol       Date:  2013-01-23       Impact factor: 2.574

4.  Australian monocot-infecting mastrevirus diversity rivals that in Africa.

Authors:  Simona Kraberger; John E Thomas; Andrew D W Geering; Anisha Dayaram; Daisy Stainton; James Hadfield; Matthew Walters; Kathleen S Parmenter; Sharon van Brunschot; David A Collings; Darren P Martin; Arvind Varsani
Journal:  Virus Res       Date:  2012-07-24       Impact factor: 3.303

5.  Forced recombination between distinct strains of Maize streak virus.

Authors:  W H Schnippenkoetter; D P Martin; J A Willment; E P Rybicki
Journal:  J Gen Virol       Date:  2001-12       Impact factor: 3.891

6.  Structure of the Maize streak virus geminate particle.

Authors:  W Zhang; N H Olson; T S Baker; L Faulkner; M Agbandje-McKenna; M I Boulton; J W Davies; R McKenna
Journal:  Virology       Date:  2001-01-20       Impact factor: 3.616

7.  Comparison of the nucleotide sequences of wheat dwarf virus (WDV) isolates from Hungary and Ukraine.

Authors:  Istvan Tóbiás; Oleksiy Shevchenko; Balázs Kiss; Andriy Bysov; Halina Snihur; Valery Polischuk; Katalin Salánki; László Palkovics
Journal:  Pol J Microbiol       Date:  2011

8.  Bromus catharticus striate mosaic virus: a new mastrevirus infecting Bromus catharticus from Australia.

Authors:  James Hadfield; Darren P Martin; Daisy Stainton; Simona Kraberger; Betty E Owor; Dionne N Shepherd; Francisco Lakay; Peter G Markham; Ray S Greber; Rob W Briddon; Arvind Varsani
Journal:  Arch Virol       Date:  2010-12-12       Impact factor: 2.574

9.  Rapid host adaptation by extensive recombination.

Authors:  Eric van der Walt; Edward P Rybicki; Arvind Varsani; J E Polston; Rosalind Billharz; Lara Donaldson; Adérito L Monjane; Darren P Martin
Journal:  J Gen Virol       Date:  2009-03       Impact factor: 3.891

10.  A highly divergent South African geminivirus species illuminates the ancient evolutionary history of this family.

Authors:  Arvind Varsani; Dionne N Shepherd; Kyle Dent; Aderito L Monjane; Edward P Rybicki; Darren P Martin
Journal:  Virol J       Date:  2009-03-25       Impact factor: 4.099

View more
  6 in total

1.  Phylogenetic analysis of Wheat dwarf virus isolates from Iran.

Authors:  Mohamad Hamed Ghodoum Parizipour; Jörg Schubert; Seyed Ali Akbar Behjatnia; Alireza Afsharifar; Antje Habekuß; Beilei Wu
Journal:  Virus Genes       Date:  2016-11-30       Impact factor: 2.332

2.  Global-scale computational analysis of genomic sequences reveals the recombination pattern and coevolution dynamics of cereal-infecting geminiviruses.

Authors:  Beilei Wu; Xiaonan Shang; Jörg Schubert; Antje Habekuß; Santiago F Elena; Xifeng Wang
Journal:  Sci Rep       Date:  2015-01-30       Impact factor: 4.379

3.  Identification of Subgenomic DNAs Associated with Wheat Dwarf Virus Infection in Iran.

Authors:  Mohamad Hamed Ghodoum Parizipour; Amir Ghaffar Shahriari
Journal:  Iran J Biotechnol       Date:  2020-10-01       Impact factor: 1.671

4.  Fangorn Forest (F2): a machine learning approach to classify genes and genera in the family Geminiviridae.

Authors:  José Cleydson F Silva; Thales F M Carvalho; Elizabeth P B Fontes; Fabio R Cerqueira
Journal:  BMC Bioinformatics       Date:  2017-09-30       Impact factor: 3.169

5.  Functional Transcomplementation between Wheat Dwarf Virus Strains in Wheat and Barley.

Authors:  Isabelle Abt; Marlène Souquet; Gersende Angot; Romain Mabon; Sylvie Dallot; Gaël Thébaud; Emmanuel Jacquot
Journal:  Viruses       Date:  2019-12-28       Impact factor: 5.048

6.  Development of loop-mediated isothermal amplification assay for rapid detection of genetically different wheat dwarf virus isolates.

Authors:  Katarzyna Trzmiel; Beata Hasiów-Jaroszewska
Journal:  Mol Biol Rep       Date:  2020-09-24       Impact factor: 2.316

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.