Literature DB >> 24115782

Taxonomic and molecular identification of hemicaloosia, hemicycliophora, gracilacus and paratylenchus species (nematoda: criconematidae).

Marco A Cordero López1, Robert T Robbins, Allen L Szalanski.   

Abstract

Populations of Hemicycliophora epicharoides, H. gigas, H. labiata, H. pruni, H. shepherdi, H. vidua, H. zuckermani, Gracilacus straeleni, and Paratylenchus labiosus were obtained from different geographical areas in the continental United States and characterized morphological and molecularly. Two new species of Hemicycliophorinae: Hemicaloosia uarki n. sp from Pinetree, St. Francis County, Arkansas, and Hemicycliophora wyei n. sp from Wayne County, North Carolina, are also described. Hemicaloosia uarki n. sp. is characterized by having two lip annuli separated from the rest of body and directed anteriorly, a long stylet (106-124 μm), long body length (1,081-1,326 μm) and a single lateral fields demarcated by interruptions of the body annuli. Hemicycliophora wyei n. sp. showed a lateral fields demarked by two faint lines with transverse anastomoses and/or breaks of the striae; an elongated not offset conical tail with distinct annulations and a rounded tip and long vulval lips with a vulval sleeve. The molecular characterizations of the new (H. uarki n. sp. and H. wyei n. sp.) and known species of Criconematidae using the ITS1 rDNA gene sequence and the molecular phylogenetic relationships are provided.

Entities:  

Keywords:  Gracilacus straeleni; Hemicaloosia uarki n. sp.; Hemicycliophora epicharoides; Hemicycliophora gigas; Hemicycliophora labiata; Hemicycliophora pruni; Hemicycliophora shepherdi; Hemicycliophora vidua; Hemicycliophora wyei n. sp.; Hemicycliophora zuckermani; Paratylenchus labiosus, phylogeny; internal transcribed spacer 1; molecular biology; morphology

Year:  2013        PMID: 24115782      PMCID: PMC3792835     

Source DB:  PubMed          Journal:  J Nematol        ISSN: 0022-300X            Impact factor:   1.402


  15 in total

1.  Phylogenetic relationships within the cyst-forming nematodes (Nematoda, Heteroderidae) based on analysis of sequences from the ITS regions of ribosomal DNA.

Authors:  S A Subbotin; A Vierstraete; P De Ley; J Rowe; L Waeyenberge; M Moens; J R Vanfleteren
Journal:  Mol Phylogenet Evol       Date:  2001-10       Impact factor: 4.286

2.  MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform.

Authors:  Kazutaka Katoh; Kazuharu Misawa; Kei-ichi Kuma; Takashi Miyata
Journal:  Nucleic Acids Res       Date:  2002-07-15       Impact factor: 16.971

3.  Phylogenetic Relationships and Genetic Variation in Longidorus and Xiphinema Species (Nematoda: Longidoridae) Using ITS1 Sequences of Nuclear Ribosomal DNA.

Authors:  Weimin Ye; Allen L Szalanski; R T Robbins
Journal:  J Nematol       Date:  2004-03       Impact factor: 1.402

4.  Revision of the Genus Paratylenchus Micoletzky, 1922 and Descriptions of New Species. Part II of Three Parts.

Authors:  D J Raski
Journal:  J Nematol       Date:  1975-07       Impact factor: 1.402

5.  Embryogenesis of Hemicycliophora epicharoides Loof, 1968 (Nematoda: Hemicycliophorinae), and Description of the Male.

Authors:  N Vovlas; R N Inserra
Journal:  J Nematol       Date:  1980-01       Impact factor: 1.402

6.  Revision of the genus Paratylenchus Micoletzky, 1922 and descriptions of new species. Part III of three parts-Gracilacus.

Authors:  D J Raski
Journal:  J Nematol       Date:  1976-04       Impact factor: 1.402

7.  jModelTest: phylogenetic model averaging.

Authors:  David Posada
Journal:  Mol Biol Evol       Date:  2008-04-08       Impact factor: 16.240

8.  MODELTEST: testing the model of DNA substitution.

Authors:  D Posada; K A Crandall
Journal:  Bioinformatics       Date:  1998       Impact factor: 6.937

9.  The internal transcribed spacer region of belonolaimus (nemata: belonolaimidae).

Authors:  T Cherry; A L Szalanski; T C Todd; T O Powers
Journal:  J Nematol       Date:  1997-03       Impact factor: 1.402

10.  Morphological and Molecular Identification of Globodera pallida Associated with Potato in Idaho.

Authors:  A M Skantar; Z A Handoo; L K Carta; D J Chitwood
Journal:  J Nematol       Date:  2007-06       Impact factor: 1.402

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  3 in total

1.  Description of Gracilacus paralatescens n. sp. (Nematoda:Paratylenchinae) found from the rhizosphere of Bamboo in Zhejiang, China.

Authors:  Munawar Maria; Ruihang Cai; Weimin Ye; Thomas O Powers; Jingwu Zheng
Journal:  J Nematol       Date:  2018       Impact factor: 1.402

2.  Morphological and Molecular Characterization of Gracilacus wuae n. sp. (Nematoda: Criconematoidea) Associated with Cow Parsnip (Heracleum maximum) in Ontario, Canada.

Authors:  Qing Yu; Weimin Ye; Tom Powers
Journal:  J Nematol       Date:  2016-09       Impact factor: 1.402

3.  Hemicycliophora ahvasiensis n. sp. (Nematoda: Hemicycliophoridae), and data on a known species, from Iran.

Authors:  Sedighe Azimi; Joaquín Abolafia; Majid Pedram
Journal:  J Nematol       Date:  2021-02-02       Impact factor: 1.402

  3 in total

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