Literature DB >> 24114119

Structural adaptation of tooth enamel protein amelogenin in the presence of SDS micelles.

Karthik Balakrishna Chandrababu1, Kaushik Dutta, Sowmya Bekshe Lokappa, Moise Ndao, John Spencer Evans, Janet Moradian-Oldak.   

Abstract

Amelogenin, the major extracellular matrix protein of developing tooth enamel is intrinsically disordered. Through its interaction with other proteins and mineral, amelogenin assists enamel biomineralization by controlling the formation of highly organized enamel crystal arrays. We used circular dichroism (CD), dynamic light scattering (DLS), fluorescence, and NMR spectroscopy to investigate the folding propensity of recombinant porcine amelogenin rP172 following its interaction with SDS, at levels above critical micelle concentration. The rP172-SDS complex formation was confirmed by DLS, while an increase in the structure moiety of rP172 was noted through CD and fluorescence experiments. Fluorescence quenching analyses performed on several rP172 mutants where all but one Trp was replaced by Tyr at different sequence regions confirmed that the interaction of amelogenin with SDS micelles occurs via the N-terminal region close to Trp25 where helical segments can be detected by NMR. NMR spectroscopy and structural refinement calculations using CS-Rosetta modeling confirm that the highly conserved N-terminal domain is prone to form helical structure when bound to SDS micelles. Our findings reported here reveal interactions leading to significant changes in the secondary structure of rP172 upon treatment with SDS. These interactions may reflect the physiological relevance of the flexible nature of amelogenin and its sequence specific helical propensity that might enable it to structurally adapt with charged and potential targets such as cell surface, mineral, and other proteins during enamel biomineralization.
Copyright © 2013 Wiley Periodicals, Inc.

Entities:  

Keywords:  CS-Rosetta; SDS; amelogenin; enamel; intrinsically disordered protein

Mesh:

Substances:

Year:  2014        PMID: 24114119      PMCID: PMC3947416          DOI: 10.1002/bip.22415

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  40 in total

1.  Organic matrix of tooth enamel.

Authors:  J E EASTOE
Journal:  Nature       Date:  1960-07-30       Impact factor: 49.962

2.  Using NMRView to visualize and analyze the NMR spectra of macromolecules.

Authors:  Bruce A Johnson
Journal:  Methods Mol Biol       Date:  2004

3.  Perturbed amelogenin secondary structure leads to uncontrolled aggregation in amelogenesis imperfecta mutant proteins.

Authors:  Rajamani Lakshminarayanan; Keith M Bromley; Ya-Ping Lei; Malcolm L Snead; Janet Moradian-Oldak
Journal:  J Biol Chem       Date:  2010-10-07       Impact factor: 5.157

4.  Toward high-resolution de novo structure prediction for small proteins.

Authors:  Philip Bradley; Kira M S Misura; David Baker
Journal:  Science       Date:  2005-09-16       Impact factor: 47.728

5.  Folding, assembly, and aggregation of recombinant murine amelogenins with T21I and P41T point mutations.

Authors:  Keith M Bromley; Rajamani Lakshminarayanan; Ya-Ping Lei; Malcolm L Snead; Janet Moradian-Oldak
Journal:  Cells Tissues Organs       Date:  2011-05-02       Impact factor: 2.481

6.  The gross conformation of protein-sodium dodecyl sulfate complexes.

Authors:  J A Reynolds; C Tanford
Journal:  J Biol Chem       Date:  1970-10-10       Impact factor: 5.157

7.  Characterization of recombinant pig enamelysin activity and cleavage of recombinant pig and mouse amelogenins.

Authors:  O H Ryu; A G Fincham; C C Hu; C Zhang; Q Qian; J D Bartlett; J P Simmer
Journal:  J Dent Res       Date:  1999-03       Impact factor: 6.116

8.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

9.  Dissecting amelogenin protein nanospheres: characterization of metastable oligomers.

Authors:  Keith M Bromley; Andrew S Kiss; Sowmya Bekshe Lokappa; Rajamani Lakshminarayanan; Daming Fan; Moise Ndao; John Spencer Evans; Janet Moradian-Oldak
Journal:  J Biol Chem       Date:  2011-08-12       Impact factor: 5.157

10.  Adsorption of amelogenin onto self-assembled and fluoroapatite surfaces.

Authors:  Barbara J Tarasevich; Scott Lea; William Bernt; Mark Engelhard; Wendy J Shaw
Journal:  J Phys Chem B       Date:  2009-02-19       Impact factor: 2.991

View more
  8 in total

1.  Tooth enamel protein amelogenin binds to ameloblast cell membrane-mimicking vesicles via its N-terminus.

Authors:  Sowmya Bekshe Lokappa; Karthik Balakrishna Chandrababu; Janet Moradian-Oldak
Journal:  Biochem Biophys Res Commun       Date:  2015-07-17       Impact factor: 3.575

2.  Structure of an Intrinsically Disordered Stress Protein Alone and Bound to a Membrane Surface.

Authors:  John Atkinson; Matthew W Clarke; Josephine M Warnica; Kelly F Boddington; Steffen P Graether
Journal:  Biophys J       Date:  2016-08-09       Impact factor: 4.033

3.  Interactions of amelogenin with phospholipids.

Authors:  Sowmya Bekshe Lokappa; Karthik Balakrishna Chandrababu; Kaushik Dutta; Iva Perovic; John Spencer Evans; Janet Moradian-Oldak
Journal:  Biopolymers       Date:  2015-02       Impact factor: 2.505

4.  Quarterly intrinsic disorder digest (April-May-June, 2014).

Authors:  Shelly DeForte; Vladimir N Uversky
Journal:  Intrinsically Disord Proteins       Date:  2017-03-01

5.  Secondary structure and dynamics study of the intrinsically disordered silica-mineralizing peptide P5 S3 during silicic acid condensation and silica decondensation.

Authors:  Christian Zerfaß; Garry W Buchko; Wendy J Shaw; Stephan Hobe; Harald Paulsen
Journal:  Proteins       Date:  2017-08-24

6.  Amelogenin and Enamel Biomimetics.

Authors:  Qichao Ruan; Janet Moradian-Oldak
Journal:  J Mater Chem B       Date:  2015       Impact factor: 6.331

7.  Controls of nature: Secondary, tertiary, and quaternary structure of the enamel protein amelogenin in solution and on hydroxyapatite.

Authors:  Wendy J Shaw; Barbara J Tarasevich; Garry W Buchko; Rajith M J Arachchige; Sarah D Burton
Journal:  J Struct Biol       Date:  2020-09-24       Impact factor: 2.867

8.  Ameloblastin peptide encoded by exon 5 interacts with amelogenin N-terminus.

Authors:  Jingtan Su; Karthik Balakrishna Chandrababu; Janet Moradian-Oldak
Journal:  Biochem Biophys Rep       Date:  2016-05-10
  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.