Literature DB >> 24109391

2-Chloro-3-[(2-oxo-2H-chromen-6-yl)amino]-naphthalene-1,4-dione.

Mikaelly O B Sousa1, Gleiciani Q Silveira, Javier A G Gomez.   

Abstract

In the title compound, C19H10ClNO4, the dihedral angle between the naphtho-quinone and coumarin rings is 48.99 (6)°. In the crystal, mol-ecules are linked by strong N-H⋯O hydrogen bonds into chains with graph-set motif C(6) along [101]. The packing also features π-π stacking inter-actions between naphtho-quinone and coumarin rings [centroid-to-centroid distances = 3.7679 (12) and 3.6180 (13) Å].

Entities:  

Year:  2013        PMID: 24109391      PMCID: PMC3793804          DOI: 10.1107/S1600536813019922

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related compounds see: Rózsa et al. (1989 ▶); Ito et al. (1993 ▶); Ishikawa et al. (1995 ▶); Padwal et al. (2011 ▶). For reference structural data, see: Ibis & Deniz (2012 ▶); Resende & Gomez (2012 ▶). For graph-set notation of hydrogen bonds, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C19H10ClNO4 M = 351.73 Monoclinic, a = 10.9371 (5) Å b = 10.4462 (5) Å c = 13.5104 (7) Å β = 108.533 (5)° V = 1463.53 (12) Å3 Z = 4 Mo Kα radiation μ = 0.29 mm−1 T = 150 K 0.23 × 0.13 × 0.07 mm

Data collection

Oxford Xcalibur Gemini Ultra diffractometer with Atlas detector Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011 ▶) T min = 0.947, T max = 1 15281 measured reflections 3527 independent reflections 2714 reflections with I > 2σ(I) R int = 0.055

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.065 S = 0.91 3527 reflections 226 parameters 2 restraints H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.21 e Å−3 Absolute structure: Flack (1983 ▶), 1217 Friedel pairs Absolute structure parameter: −0.07 (5) Data collection: CrysAlis PRO (Agilent, 2011 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813019922/bx2446sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813019922/bx2446Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813019922/bx2446Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H10ClNO4F(000) = 720
Mr = 351.73Dx = 1.596 Mg m3
Monoclinic, CcMo Kα radiation, λ = 0.71073 Å
Hall symbol: C -2ycCell parameters from 5237 reflections
a = 10.9371 (5) Åθ = 2.0–29.5°
b = 10.4462 (5) ŵ = 0.29 mm1
c = 13.5104 (7) ÅT = 150 K
β = 108.533 (5)°Prism, violet
V = 1463.53 (12) Å30.23 × 0.13 × 0.07 mm
Z = 4
Oxford Xcalibur Gemini Ultra diffractometer with Atlas detector3527 independent reflections
Graphite monochromator2714 reflections with I > 2σ(I)
Detector resolution: 10.4186 pixels mm-1Rint = 0.055
ω scansθmax = 28.5°, θmin = 2.8°
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011)h = −14→14
Tmin = 0.947, Tmax = 1k = −13→13
15281 measured reflectionsl = −18→18
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.036H-atom parameters constrained
wR(F2) = 0.065w = 1/[σ2(Fo2) + (0.029P)2] where P = (Fo2 + 2Fc2)/3
S = 0.91(Δ/σ)max < 0.001
3527 reflectionsΔρmax = 0.23 e Å3
226 parametersΔρmin = −0.21 e Å3
2 restraintsAbsolute structure: Flack (1983), 1217 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.07 (5)
Experimental. CrysAlisPro, Oxford Diffraction Ltd., Version 1.171.33.55 (release 05-01-2010 CrysAlis171 .NET) (compiled Jan 5 2010,16:28:46) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl0.31971 (5)0.30204 (5)0.61162 (4)0.02411 (12)
O40.57743 (16)−0.02583 (15)0.22630 (13)0.0366 (4)
O30.39509 (13)0.03816 (14)0.24617 (11)0.0246 (4)
O1−0.11020 (14)0.09274 (14)0.55900 (12)0.0292 (4)
O20.31861 (14)0.29316 (15)0.82346 (11)0.0279 (4)
N10.07529 (16)0.14446 (17)0.48249 (13)0.0208 (4)
H1−0.00480.14310.44530.025*
C20.20172 (19)0.23128 (19)0.65296 (15)0.0182 (5)
C30.09915 (19)0.17092 (18)0.58553 (15)0.0179 (5)
C140.3192 (2)0.0628 (2)0.30908 (16)0.0197 (5)
C90.11248 (18)0.2050 (2)0.80240 (15)0.0182 (4)
C10.2201 (2)0.2472 (2)0.76414 (17)0.0187 (4)
C110.16331 (19)0.11893 (19)0.42803 (15)0.0183 (4)
C10−0.00065 (19)0.1522 (2)0.73331 (16)0.0192 (5)
C130.2008 (2)0.1182 (2)0.26179 (16)0.0214 (5)
H130.1730.13630.18910.026*
C4−0.0132 (2)0.13481 (18)0.62218 (16)0.0191 (5)
C120.1236 (2)0.14658 (19)0.32122 (16)0.0211 (5)
H120.0420.18560.28950.025*
C150.36188 (19)0.03463 (19)0.41469 (17)0.0195 (5)
C160.28168 (19)0.06194 (19)0.47438 (16)0.0202 (5)
H160.30850.04140.54660.024*
C190.5182 (2)−0.0122 (2)0.28635 (19)0.0269 (5)
C180.5609 (2)−0.0425 (2)0.39665 (18)0.0258 (5)
H180.6438−0.07950.42650.031*
C80.1236 (2)0.2211 (2)0.90669 (17)0.0240 (5)
H80.19930.2580.95360.029*
C5−0.1001 (2)0.1138 (2)0.76989 (17)0.0243 (5)
H5−0.17650.07750.72350.029*
C6−0.0869 (2)0.1289 (2)0.87452 (18)0.0265 (5)
H6−0.15430.10170.90.032*
C70.0230 (2)0.1829 (2)0.94223 (17)0.0264 (5)
H70.03010.19421.01360.032*
C170.4889 (2)−0.0209 (2)0.45813 (18)0.0249 (5)
H170.5209−0.04190.53020.03*
U11U22U33U12U13U23
Cl0.0214 (2)0.0303 (3)0.0225 (2)−0.0092 (3)0.0095 (2)−0.0010 (3)
O40.0313 (10)0.0461 (11)0.0399 (10)0.0050 (8)0.0221 (8)−0.0034 (8)
O30.0222 (8)0.0287 (9)0.0246 (9)0.0013 (7)0.0101 (7)−0.0018 (6)
O10.0234 (9)0.0360 (10)0.0286 (9)−0.0082 (7)0.0091 (7)−0.0020 (7)
O20.0187 (8)0.0391 (10)0.0252 (8)−0.0062 (7)0.0060 (7)−0.0032 (7)
N10.0147 (9)0.0263 (10)0.0214 (10)−0.0009 (7)0.0055 (8)−0.0011 (7)
C20.0175 (11)0.0185 (12)0.0225 (12)−0.0010 (8)0.0120 (9)0.0029 (8)
C30.0188 (11)0.0156 (11)0.0196 (11)0.0036 (9)0.0065 (9)0.0045 (8)
C140.0191 (11)0.0205 (11)0.0206 (11)−0.0041 (9)0.0079 (9)−0.0025 (9)
C90.0186 (11)0.0159 (10)0.0226 (11)0.0040 (9)0.0099 (9)0.0033 (9)
C10.0152 (10)0.0172 (11)0.0231 (11)0.0033 (8)0.0053 (9)0.0011 (8)
C110.0190 (10)0.0176 (11)0.0199 (11)−0.0042 (9)0.0085 (9)−0.0047 (9)
C100.0170 (11)0.0149 (11)0.0279 (12)0.0057 (8)0.0103 (9)0.0041 (9)
C130.0230 (11)0.0235 (12)0.0165 (11)−0.0028 (9)0.0045 (9)−0.0022 (9)
C40.0177 (11)0.0140 (11)0.0253 (12)0.0014 (9)0.0066 (10)0.0015 (9)
C120.0166 (10)0.0204 (12)0.0235 (12)−0.0001 (9)0.0027 (9)−0.0007 (9)
C150.0160 (11)0.0161 (11)0.0261 (12)−0.0014 (8)0.0065 (9)−0.0005 (8)
C160.0210 (11)0.0207 (12)0.0186 (11)0.0007 (9)0.0060 (9)−0.0004 (8)
C190.0231 (12)0.0208 (12)0.0390 (14)0.0007 (10)0.0127 (11)−0.0014 (10)
C180.0183 (12)0.0252 (13)0.0328 (13)0.0053 (9)0.0067 (10)0.0037 (10)
C80.0224 (12)0.0268 (13)0.0231 (12)0.0055 (9)0.0076 (10)0.0029 (9)
C50.0201 (11)0.0201 (12)0.0360 (14)0.0017 (9)0.0135 (10)0.0020 (10)
C60.0232 (12)0.0298 (14)0.0338 (14)0.0067 (10)0.0194 (11)0.0070 (10)
C70.0270 (12)0.0339 (15)0.0230 (12)0.0098 (11)0.0146 (10)0.0059 (10)
C170.0245 (13)0.0222 (12)0.0262 (12)0.0014 (10)0.0054 (11)0.0028 (10)
Cl—C21.7268 (19)C10—C51.389 (3)
O4—C191.197 (2)C10—C41.475 (3)
O3—C191.385 (3)C13—C121.370 (3)
O3—C141.387 (2)C13—H130.95
O1—C41.213 (2)C12—H120.95
O2—C11.219 (3)C15—C161.397 (3)
N1—C31.361 (2)C15—C171.446 (3)
N1—C111.411 (2)C16—H160.95
N1—H10.86C19—C181.448 (3)
C2—C31.355 (3)C18—C171.333 (3)
C2—C11.460 (3)C18—H180.95
C3—C41.511 (3)C8—C71.391 (3)
C14—C131.376 (3)C8—H80.95
C14—C151.385 (3)C5—C61.384 (3)
C9—C81.386 (3)C5—H50.95
C9—C101.404 (3)C6—C71.379 (3)
C9—C11.494 (3)C6—H60.95
C11—C161.381 (3)C7—H70.95
C11—C121.399 (3)C17—H170.95
C19—O3—C14121.75 (17)C13—C12—C11120.85 (19)
C3—N1—C11129.15 (18)C13—C12—H12119.6
C3—N1—H1115.4C11—C12—H12119.6
C11—N1—H1115.4C14—C15—C16118.94 (18)
C3—C2—C1123.94 (18)C14—C15—C17117.96 (18)
C3—C2—Cl121.72 (15)C16—C15—C17123.1 (2)
C1—C2—Cl114.29 (15)C11—C16—C15119.77 (19)
C2—C3—N1129.12 (18)C11—C16—H16120.1
C2—C3—C4118.78 (17)C15—C16—H16120.1
N1—C3—C4111.90 (17)O4—C19—O3116.6 (2)
C13—C14—C15121.78 (18)O4—C19—C18127.2 (2)
C13—C14—O3116.84 (18)O3—C19—C18116.22 (18)
C15—C14—O3121.37 (18)C17—C18—C19122.9 (2)
C8—C9—C10119.83 (18)C17—C18—H18118.6
C8—C9—C1119.46 (18)C19—C18—H18118.6
C10—C9—C1120.69 (17)C9—C8—C7119.5 (2)
O2—C1—C2121.67 (19)C9—C8—H8120.2
O2—C1—C9121.19 (19)C7—C8—H8120.2
C2—C1—C9117.14 (18)C6—C5—C10119.4 (2)
C16—C11—C12119.73 (18)C6—C5—H5120.3
C16—C11—N1122.81 (18)C10—C5—H5120.3
C12—C11—N1117.36 (18)C7—C6—C5120.7 (2)
C5—C10—C9120.07 (19)C7—C6—H6119.7
C5—C10—C4119.79 (19)C5—C6—H6119.7
C9—C10—C4120.13 (18)C6—C7—C8120.4 (2)
C12—C13—C14118.92 (19)C6—C7—H7119.8
C12—C13—H13120.5C8—C7—H7119.8
C14—C13—H13120.5C18—C17—C15119.8 (2)
O1—C4—C10122.55 (18)C18—C17—H17120.1
O1—C4—C3118.71 (18)C15—C17—H17120.1
C10—C4—C3118.74 (18)
C1—C2—C3—N1−176.13 (19)N1—C3—C4—O1−2.7 (3)
Cl—C2—C3—N16.5 (3)C2—C3—C4—C10−7.3 (3)
C1—C2—C3—C49.5 (3)N1—C3—C4—C10177.40 (17)
Cl—C2—C3—C4−167.80 (14)C14—C13—C12—C11−0.6 (3)
C11—N1—C3—C230.9 (3)C16—C11—C12—C13−0.2 (3)
C11—N1—C3—C4−154.41 (19)N1—C11—C12—C13−176.49 (18)
C19—O3—C14—C13177.18 (19)C13—C14—C15—C160.7 (3)
C19—O3—C14—C15−1.9 (3)O3—C14—C15—C16179.77 (18)
C3—C2—C1—O2174.1 (2)C13—C14—C15—C17−178.7 (2)
Cl—C2—C1—O2−8.4 (3)O3—C14—C15—C170.4 (3)
C3—C2—C1—C9−6.0 (3)C12—C11—C16—C151.2 (3)
Cl—C2—C1—C9171.51 (14)N1—C11—C16—C15177.35 (18)
C8—C9—C1—O21.6 (3)C14—C15—C16—C11−1.5 (3)
C10—C9—C1—O2179.98 (19)C17—C15—C16—C11177.8 (2)
C8—C9—C1—C2−178.30 (18)C14—O3—C19—O4−177.49 (19)
C10—C9—C1—C20.1 (3)C14—O3—C19—C182.5 (3)
C3—N1—C11—C1629.8 (3)O4—C19—C18—C17178.2 (2)
C3—N1—C11—C12−154.0 (2)O3—C19—C18—C17−1.8 (3)
C8—C9—C10—C5−1.4 (3)C10—C9—C8—C71.0 (3)
C1—C9—C10—C5−179.75 (18)C1—C9—C8—C7179.39 (19)
C8—C9—C10—C4179.97 (18)C9—C10—C5—C60.5 (3)
C1—C9—C10—C41.6 (3)C4—C10—C5—C6179.15 (19)
C15—C14—C13—C120.4 (3)C10—C5—C6—C70.8 (3)
O3—C14—C13—C12−178.74 (18)C5—C6—C7—C8−1.2 (3)
C5—C10—C4—O13.3 (3)C9—C8—C7—C60.3 (3)
C9—C10—C4—O1−178.1 (2)C19—C18—C17—C150.4 (3)
C5—C10—C4—C3−176.81 (17)C14—C15—C17—C180.4 (3)
C9—C10—C4—C31.9 (3)C16—C15—C17—C18−179.0 (2)
C2—C3—C4—O1172.59 (19)
D—H···AD—HH···AD···AD—H···A
N1—H1···O2i0.862.213.015 (2)157
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯O2i 0.862.213.015 (2)157

Symmetry code: (i) .

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