Literature DB >> 24109360

1,4,8,11-Tetra-azonia-cyclo-tetra-decane tetra-kis-(hydrogensulfate).

Salem Said1, Noureddine Mhadhbi, Fadhel Hajlaoui, Thierry Bataille, Houcine Naïli.   

Abstract

In the title salt, C10H28N4 (4+)·4HSO4 (-), the cation lies about an inversion center. In the crystal, O-H⋯O and N-H⋯O hydrogen bonds connect the anions and cations, forming a three-dimensional network.

Entities:  

Year:  2013        PMID: 24109360      PMCID: PMC3793773          DOI: 10.1107/S1600536813018953

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the chemistry and applications of macrocyclic polyamine ligands, see: Wainwright (2001 ▶); Lukes et al. (2001 ▶); Zhang et al. (2003 ▶); Liu (2004 ▶). For related structures, see: Melson (1979 ▶); Subramanian & Zaworotko (1995 ▶); Ferchichi et al. (2010 ▶); Pojarová et al. (2010 ▶).

Experimental

Crystal data

C10H28N4 4+·4HSO4 − M = 592.68 Monoclinic, a = 7.8177 (2) Å b = 16.6464 (3) Å c = 8.7222 (2) Å β = 97.165 (1)° V = 1126.21 (4) Å3 Z = 2 Mo Kα radiation μ = 0.51 mm−1 T = 293 K 0.03 × 0.02 × 0.01 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: analytical (face-indexed; de Meulenaer & Tompa, 1965 ▶) T min = 0.988, T max = 0.995 18757 measured reflections 4952 independent reflections 4074 reflections with I > 2σ(I) R int = 0.060

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.123 S = 1.05 4952 reflections 163 parameters H-atom parameters constrained Δρmax = 0.65 e Å−3 Δρmin = −0.54 e Å−3 Data collection: COLLECT (Nonius, 1998 ▶); cell refinement: SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO (Otwinowski & Minor, 1997 ▶) and SCALEPACK; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg & Berndt, 1999 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813018953/lh5619sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813018953/lh5619Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813018953/lh5619Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H28N44+·4HSO4F(000) = 624.0
Mr = 592.68Dx = 1.748 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 15635 reflections
a = 7.8177 (2) Åθ = 2.9–35.0°
b = 16.6464 (3) ŵ = 0.51 mm1
c = 8.7222 (2) ÅT = 293 K
β = 97.165 (1)°Prism, colourless
V = 1126.21 (4) Å30.03 × 0.02 × 0.01 mm
Z = 2
Nonius KappaCCD diffractometer4952 independent reflections
Radiation source: fine-focus sealed tube4074 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.060
CCD rotation images, thick slices scansθmax = 35.0°, θmin = 3.4°
Absorption correction: analytical (a face-indexed absorption correction was applied using the Tompa method; de Meulenaer & Tompa, 1965)h = −12→10
Tmin = 0.988, Tmax = 0.995k = −26→26
18757 measured reflectionsl = −13→14
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042H-atom parameters constrained
wR(F2) = 0.123w = 1/[σ2(Fo2) + (0.0623P)2 + 0.4049P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max = 0.001
4952 reflectionsΔρmax = 0.65 e Å3
163 parametersΔρmin = −0.54 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.019 (6)
Experimental. Data were corrected for Lorentz-polarization effects and an analytical absorption correction (de Meulenaer & Tompa, 1965) was applied. The structure was solved in the P 1 21/c 1 space group by the direct methods (S and O) and subsequent difference Fourier syntheses (all other atoms), with an exception for H atoms bonded to C and N atoms which are positioned geometrically.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.34278 (4)0.656923 (16)0.06576 (3)0.02143 (8)
S20.23332 (4)0.351066 (18)0.25289 (4)0.02525 (9)
O10.49495 (13)0.67391 (6)0.17729 (12)0.0309 (2)
O20.37660 (15)0.69761 (7)−0.08875 (11)0.0345 (2)
O30.18911 (13)0.69666 (7)0.10348 (12)0.0326 (2)
O40.3244 (2)0.57165 (7)0.04142 (15)0.0463 (3)
O60.38228 (16)0.32441 (7)0.38175 (14)0.0396 (3)
O50.21214 (17)0.43447 (6)0.28810 (17)0.0425 (3)
O70.08566 (15)0.30213 (7)0.27346 (18)0.0456 (3)
O80.29980 (19)0.33486 (11)0.10785 (15)0.0550 (4)
N10.28066 (13)0.46125 (6)−0.20331 (12)0.02426 (19)
H1A0.36150.4232−0.18010.029*
H1B0.28440.4940−0.12090.029*
C10.10770 (16)0.42072 (7)−0.22403 (13)0.0239 (2)
H1C0.01700.4609−0.23480.029*
H1D0.09450.3882−0.13400.029*
N2−0.08305 (14)0.33181 (6)−0.40184 (12)0.02342 (19)
H2A−0.10980.3079−0.31540.028*
H2B−0.07900.2932−0.47350.028*
C20.09283 (15)0.36783 (7)−0.36757 (13)0.0224 (2)
H2C0.11750.3997−0.45530.027*
H2D0.17770.3252−0.35240.027*
C4−0.22592 (16)0.38901 (7)−0.45835 (14)0.0239 (2)
H4A−0.23250.4310−0.38210.029*
H4B−0.33490.3604−0.47080.029*
C50.33057 (15)0.50958 (7)−0.33674 (15)0.0253 (2)
H5A0.34330.4739−0.42260.030*
H5B0.44090.5353−0.30620.030*
C3−0.19624 (18)0.42678 (8)−0.61163 (15)0.0283 (2)
H3A−0.08250.4510−0.60140.034*
H3B−0.20000.3852−0.68990.034*
H20.41330.27360.35700.103 (11)*
H10.46450.6890−0.10220.085 (10)*
U11U22U33U12U13U23
S10.02404 (14)0.02050 (13)0.01984 (13)0.00254 (8)0.00312 (9)0.00086 (8)
S20.02107 (15)0.02753 (15)0.02768 (15)0.00164 (9)0.00516 (10)−0.00477 (10)
O10.0275 (5)0.0362 (5)0.0274 (4)0.0037 (4)−0.0028 (3)−0.0011 (4)
O20.0327 (5)0.0474 (6)0.0247 (4)0.0048 (4)0.0084 (4)0.0110 (4)
O30.0251 (4)0.0431 (5)0.0307 (5)0.0095 (4)0.0082 (3)0.0078 (4)
O40.0715 (9)0.0225 (4)0.0434 (6)−0.0033 (5)0.0013 (6)−0.0054 (4)
O60.0375 (6)0.0399 (6)0.0382 (6)0.0056 (4)−0.0078 (4)−0.0025 (5)
O50.0433 (6)0.0233 (4)0.0630 (8)0.0016 (4)0.0149 (5)0.0004 (5)
O70.0285 (5)0.0374 (6)0.0720 (9)−0.0091 (4)0.0108 (5)−0.0178 (6)
O80.0425 (7)0.0928 (11)0.0314 (6)0.0243 (7)0.0119 (5)−0.0037 (6)
N10.0230 (4)0.0228 (4)0.0249 (4)0.0006 (3)−0.0051 (3)−0.0002 (3)
C10.0255 (5)0.0250 (5)0.0204 (4)−0.0032 (4)0.0001 (4)−0.0003 (4)
N20.0273 (5)0.0176 (4)0.0246 (4)−0.0037 (3)0.0001 (3)0.0006 (3)
C20.0225 (5)0.0211 (4)0.0230 (5)0.0002 (3)0.0009 (4)0.0000 (4)
C40.0219 (5)0.0232 (5)0.0263 (5)−0.0024 (4)0.0019 (4)0.0014 (4)
C50.0187 (5)0.0236 (5)0.0328 (6)−0.0003 (3)0.0007 (4)0.0014 (4)
C30.0297 (6)0.0284 (5)0.0270 (5)0.0079 (4)0.0046 (4)0.0049 (4)
S1—O41.4399 (11)C1—H1D0.9700
S1—O31.4449 (10)N2—C21.4957 (15)
S1—O11.4672 (10)N2—C41.5033 (16)
S1—O21.5601 (10)N2—H2A0.9000
S2—O51.4360 (11)N2—H2B0.9000
S2—O71.4423 (12)C2—H2C0.9700
S2—O81.4516 (13)C2—H2D0.9700
S2—O61.5779 (11)C4—C31.5211 (17)
O2—H10.7258C4—H4A0.9700
O6—H20.9134C4—H4B0.9700
N1—C11.5017 (16)C5—C3i1.5199 (17)
N1—C51.5058 (17)C5—H5A0.9700
N1—H1A0.9000C5—H5B0.9700
N1—H1B0.9000C3—C5i1.5199 (17)
C1—C21.5232 (16)C3—H3A0.9700
C1—H1C0.9700C3—H3B0.9700
O4—S1—O3114.47 (8)C4—N2—H2A108.3
O4—S1—O1110.22 (7)C2—N2—H2B108.3
O3—S1—O1112.91 (6)C4—N2—H2B108.3
O4—S1—O2108.98 (7)H2A—N2—H2B107.4
O3—S1—O2103.49 (6)N2—C2—C1111.72 (10)
O1—S1—O2106.16 (6)N2—C2—H2C109.3
O5—S2—O7113.84 (7)C1—C2—H2C109.3
O5—S2—O8115.43 (9)N2—C2—H2D109.3
O7—S2—O8112.49 (9)C1—C2—H2D109.3
O5—S2—O6102.36 (8)H2C—C2—H2D107.9
O7—S2—O6106.48 (8)N2—C4—C3111.19 (10)
O8—S2—O6104.82 (7)N2—C4—H4A109.4
S1—O2—H1108.7C3—C4—H4A109.4
S2—O6—H2106.6N2—C4—H4B109.4
C1—N1—C5117.60 (9)C3—C4—H4B109.4
C1—N1—H1A107.9H4A—C4—H4B108.0
C5—N1—H1A107.9N1—C5—C3i111.43 (10)
C1—N1—H1B107.9N1—C5—H5A109.3
C5—N1—H1B107.9C3i—C5—H5A109.3
H1A—N1—H1B107.2N1—C5—H5B109.3
N1—C1—C2109.50 (10)C3i—C5—H5B109.3
N1—C1—H1C109.8H5A—C5—H5B108.0
C2—C1—H1C109.8C5i—C3—C4111.90 (11)
N1—C1—H1D109.8C5i—C3—H3A109.2
C2—C1—H1D109.8C4—C3—H3A109.2
H1C—C1—H1D108.2C5i—C3—H3B109.2
C2—N2—C4116.01 (9)C4—C3—H3B109.2
C2—N2—H2A108.3H3A—C3—H3B107.9
D—H···AD—HH···AD···AD—H···A
N1—H1A···O4ii0.902.603.2773 (18)133
N1—H1A···O1ii0.901.972.8445 (14)165
N1—H1B···O40.901.912.8051 (16)171
N2—H2A···O3iii0.902.022.8675 (15)156
N2—H2B···O3iv0.902.092.9117 (14)151
N2—H2A···O7v0.902.452.9232 (15)113
O2—H1···O8ii0.731.892.6125 (18)172
O6—H2···O1vi0.911.852.7544 (17)172
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1A⋯O4i 0.902.603.2773 (18)133
N1—H1A⋯O1i 0.901.972.8445 (14)165
N1—H1B⋯O40.901.912.8051 (16)171
N2—H2A⋯O3ii 0.902.022.8675 (15)156
N2—H2B⋯O3iii 0.902.092.9117 (14)151
N2—H2A⋯O7iv 0.902.452.9232 (15)113
O2—H1⋯O8i 0.731.892.6125 (18)172
O6—H2⋯O1v 0.911.852.7544 (17)172

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  5 in total

Review 1.  PARACEST agents: modulating MRI contrast via water proton exchange.

Authors:  Shanrong Zhang; Matthew Merritt; Donald E Woessner; Robert E Lenkinski; A Dean Sherry
Journal:  Acc Chem Res       Date:  2003-10       Impact factor: 22.384

Review 2.  The role of coordination chemistry in the development of target-specific radiopharmaceuticals.

Authors:  Shuang Liu
Journal:  Chem Soc Rev       Date:  2004-08-16       Impact factor: 54.564

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  1,4,8,11-Tetra-azoniacyclo-tetra-decane tetra-chloridocobaltate(II) dichloride.

Authors:  Tarek Ferchichi; Besma Trojett; Hassouna Dhaouadi; Houda Marouani
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-03

5.  1,4,8,11-Tetra-azoniacyclo-tetradecane diaqua-tetra-chloridomanganese(II) dichloride dihydrate.

Authors:  Michaela Pojarová; Karla Fejfarová; Brahim El Bali
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-08-18
  5 in total
  1 in total

1.  Crystal structure of 1,4,8,11-tetra-azonia-cyclo-tetra-decane bis-(dichromate) monohydrate from synchrotron data.

Authors:  Dohyun Moon; Jong-Ha Choi
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2017-04-28
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.