Literature DB >> 24109333

2-(4-Chloro-phen-yl)-1-pentyl-4,5-di-phenyl-1H-imidazole.

Shaaban K Mohamed1, Mehmet Akkurt, Kuldip Singh, Adel A Marzouk, Antar A Abdelhamid.   

Abstract

In the title compound, C26H25ClN2, the phenyl rings and the 2-(4-chloro-phen-yl) group make dihedral angles of 30.03 (11), 67.49 (12) and 41.56 (11)°, respectively, with the imidazole ring. In the crystal, the mol-ecules inter-act with each other via very weak C-H⋯π contacts, forming layers parallel to (110).

Entities:  

Year:  2013        PMID: 24109333      PMCID: PMC3793746          DOI: 10.1107/S1600536813018229

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For biological applications of imidazole derivatives, see: Shalini et al. (2011 ▶); Ramesh et al. (2012 ▶); Wolkenberg et al. (2004 ▶). For related structures, see: Simpson et al. (2013 ▶); Akkurt et al. (2013 ▶).

Experimental

Crystal data

C26H25ClN2 M = 400.93 Monoclinic, a = 10.471 (2) Å b = 9.7798 (19) Å c = 21.682 (4) Å β = 91.080 (4)° V = 2219.9 (7) Å3 Z = 4 Mo Kα radiation μ = 0.19 mm−1 T = 150 K 0.36 × 0.14 × 0.11 mm

Data collection

Bruker APEX 2000 CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.969, T max = 0.980 16940 measured reflections 4346 independent reflections 2593 reflections with I > 2σ(I) R int = 0.088

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.110 S = 0.89 4346 reflections 263 parameters H-atom parameters constrained Δρmax = 0.26 e Å−3 Δρmin = −0.31 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶) and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813018229/yk2095sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813018229/yk2095Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C26H25ClN2F(000) = 848
Mr = 400.93Dx = 1.200 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 811 reflections
a = 10.471 (2) Åθ = 2.8–23.3°
b = 9.7798 (19) ŵ = 0.19 mm1
c = 21.682 (4) ÅT = 150 K
β = 91.080 (4)°Block, colourless
V = 2219.9 (7) Å30.36 × 0.14 × 0.11 mm
Z = 4
Bruker APEX 2000 CCD area-detector diffractometer4346 independent reflections
Radiation source: fine-focus sealed tube2593 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.088
φ and ω scansθmax = 26.0°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −12→12
Tmin = 0.969, Tmax = 0.980k = −12→11
16940 measured reflectionsl = −26→26
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.053H-atom parameters constrained
wR(F2) = 0.110 W = 1/[Σ2(FO2) + (0.0377P)2] WHERE P = (FO2 + 2FC2)/3
S = 0.89(Δ/σ)max = 0.001
4346 reflectionsΔρmax = 0.26 e Å3
263 parametersΔρmin = −0.31 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All s.u.'s are estimated from the variances of the (full) variance-covariance matrix. The cell s.u.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.48467 (6)0.57406 (7)1.11900 (3)0.0565 (3)
N10.95325 (15)0.25818 (17)0.95080 (7)0.0286 (6)
N31.02899 (16)0.24351 (18)1.04691 (7)0.0308 (6)
C20.9371 (2)0.2951 (2)1.01115 (9)0.0286 (7)
C41.10784 (19)0.1722 (2)1.00835 (9)0.0295 (7)
C51.06275 (19)0.1789 (2)0.94862 (9)0.0288 (7)
C60.87851 (19)0.3032 (2)0.89685 (9)0.0304 (7)
C70.94069 (19)0.4250 (2)0.86571 (9)0.0338 (8)
C80.8550 (2)0.4923 (2)0.81788 (10)0.0373 (8)
C90.9151 (2)0.6130 (3)0.78703 (11)0.0500 (9)
C100.8260 (2)0.6845 (3)0.74173 (11)0.0629 (11)
C110.82661 (19)0.3684 (2)1.03559 (9)0.0293 (7)
C120.7711 (2)0.4823 (2)1.00771 (10)0.0358 (8)
C130.6648 (2)0.5448 (2)1.03269 (10)0.0393 (8)
C140.6155 (2)0.4937 (3)1.08642 (10)0.0384 (8)
C150.6700 (2)0.3823 (2)1.11571 (10)0.0381 (8)
C160.7750 (2)0.3207 (2)1.09032 (9)0.0336 (8)
C171.22136 (19)0.1012 (2)1.03386 (9)0.0304 (7)
C181.2830 (2)0.1515 (3)1.08647 (10)0.0429 (9)
C191.3879 (2)0.0841 (3)1.11173 (11)0.0534 (10)
C201.4320 (2)−0.0343 (3)1.08535 (12)0.0519 (10)
C211.3724 (2)−0.0846 (3)1.03348 (11)0.0462 (9)
C221.2677 (2)−0.0180 (2)1.00781 (10)0.0366 (8)
C231.1111 (2)0.1239 (2)0.88975 (9)0.0304 (8)
C241.2243 (2)0.1728 (3)0.86639 (10)0.0445 (9)
C251.2713 (2)0.1218 (3)0.81166 (11)0.0564 (10)
C261.2062 (3)0.0227 (3)0.77984 (11)0.0522 (10)
C271.0928 (3)−0.0263 (3)0.80242 (10)0.0509 (10)
C281.0457 (2)0.0242 (2)0.85709 (10)0.0401 (8)
H6A0.791500.328700.909700.0360*
H6B0.870700.226900.867000.0360*
H7A0.964800.493400.897500.0410*
H7B1.020000.394200.845800.0410*
H8A0.831200.423800.786000.0450*
H8B0.775500.522500.837900.0450*
H9A0.991800.581900.765000.0600*
H9B0.943300.679200.819000.0600*
H10A0.796600.619300.710200.0950*
H10B0.871300.759900.722000.0950*
H10C0.752200.720500.763600.0950*
H120.806500.518000.971000.0430*
H130.626600.621701.013000.0470*
H150.635500.348501.152900.0460*
H160.812900.244201.110500.0400*
H181.252800.232801.105300.0510*
H191.429700.119901.147500.0640*
H201.50340−0.080801.103100.0620*
H211.40310−0.165901.015000.0550*
H221.22700−0.054300.971900.0440*
H241.270400.242000.888100.0530*
H251.349400.156000.796200.0680*
H261.23870−0.012300.742400.0630*
H271.04690−0.095000.780400.0610*
H280.96750−0.010100.872300.0480*
U11U22U33U12U13U23
Cl10.0404 (4)0.0733 (5)0.0562 (4)0.0153 (3)0.0123 (3)−0.0120 (4)
N10.0299 (10)0.0311 (11)0.0249 (10)0.0013 (9)0.0005 (8)0.0005 (8)
N30.0310 (10)0.0337 (12)0.0279 (10)0.0011 (9)0.0048 (8)−0.0006 (9)
C20.0315 (13)0.0272 (13)0.0273 (12)−0.0010 (10)0.0035 (10)−0.0005 (10)
C40.0312 (12)0.0274 (13)0.0301 (12)0.0002 (10)0.0042 (10)0.0013 (10)
C50.0292 (12)0.0275 (13)0.0298 (12)0.0013 (10)0.0029 (10)0.0007 (10)
C60.0263 (12)0.0357 (14)0.0290 (12)0.0025 (10)−0.0025 (10)−0.0003 (10)
C70.0326 (13)0.0381 (15)0.0309 (12)−0.0019 (11)0.0025 (10)0.0019 (11)
C80.0393 (14)0.0359 (15)0.0366 (13)−0.0003 (11)0.0021 (11)0.0027 (11)
C90.0488 (15)0.0581 (19)0.0432 (15)0.0014 (14)0.0070 (12)0.0190 (14)
C100.071 (2)0.063 (2)0.0550 (18)0.0116 (16)0.0071 (15)0.0256 (15)
C110.0298 (12)0.0291 (14)0.0291 (12)−0.0025 (10)0.0013 (10)−0.0034 (10)
C120.0378 (14)0.0355 (15)0.0344 (13)−0.0015 (11)0.0081 (11)−0.0004 (11)
C130.0353 (14)0.0414 (16)0.0412 (14)0.0057 (11)0.0010 (11)−0.0024 (12)
C140.0317 (13)0.0453 (16)0.0383 (14)0.0041 (12)0.0053 (11)−0.0108 (12)
C150.0401 (14)0.0449 (16)0.0295 (13)−0.0035 (12)0.0099 (11)−0.0039 (12)
C160.0365 (13)0.0327 (14)0.0317 (13)0.0019 (11)0.0028 (11)−0.0014 (11)
C170.0300 (12)0.0316 (14)0.0299 (12)−0.0008 (11)0.0056 (10)0.0064 (11)
C180.0434 (15)0.0466 (17)0.0385 (14)0.0065 (12)−0.0032 (12)−0.0010 (12)
C190.0455 (16)0.070 (2)0.0441 (15)0.0057 (15)−0.0117 (13)0.0017 (15)
C200.0370 (15)0.065 (2)0.0537 (17)0.0133 (14)−0.0014 (13)0.0149 (15)
C210.0429 (15)0.0426 (17)0.0533 (16)0.0119 (13)0.0082 (13)0.0090 (14)
C220.0373 (14)0.0348 (15)0.0378 (13)0.0022 (11)0.0018 (11)0.0057 (11)
C230.0344 (13)0.0294 (14)0.0275 (12)0.0072 (11)0.0003 (10)0.0017 (10)
C240.0357 (14)0.0588 (18)0.0391 (14)−0.0044 (12)0.0073 (11)−0.0100 (13)
C250.0418 (15)0.082 (2)0.0458 (16)0.0031 (15)0.0155 (13)−0.0067 (16)
C260.0646 (19)0.062 (2)0.0304 (14)0.0183 (15)0.0098 (13)−0.0049 (14)
C270.078 (2)0.0425 (17)0.0323 (14)−0.0033 (15)0.0013 (13)−0.0064 (12)
C280.0503 (15)0.0360 (15)0.0341 (13)−0.0045 (12)0.0049 (12)0.0016 (11)
Cl1—C141.741 (2)C25—C261.365 (4)
N1—C21.371 (2)C26—C271.379 (4)
N1—C51.386 (3)C27—C281.384 (3)
N1—C61.463 (3)C6—H6A0.9900
N3—C21.324 (3)C6—H6B0.9900
N3—C41.376 (3)C7—H7A0.9900
C2—C111.468 (3)C7—H7B0.9900
C4—C51.372 (3)C8—H8A0.9900
C4—C171.475 (3)C8—H8B0.9900
C5—C231.483 (3)C9—H9A0.9900
C6—C71.522 (3)C9—H9B0.9900
C7—C81.510 (3)C10—H10A0.9800
C8—C91.501 (3)C10—H10B0.9800
C9—C101.513 (3)C10—H10C0.9800
C11—C121.390 (3)C12—H120.9500
C11—C161.394 (3)C13—H130.9500
C12—C131.389 (3)C15—H150.9500
C13—C141.377 (3)C16—H160.9500
C14—C151.379 (3)C18—H180.9500
C15—C161.378 (3)C19—H190.9500
C17—C181.390 (3)C20—H200.9500
C17—C221.387 (3)C21—H210.9500
C18—C191.385 (3)C22—H220.9500
C19—C201.375 (4)C24—H240.9500
C20—C211.367 (4)C25—H250.9500
C21—C221.383 (3)C26—H260.9500
C23—C241.383 (3)C27—H270.9500
C23—C281.379 (3)C28—H280.9500
C24—C251.386 (3)
C2—N1—C5107.28 (16)C6—C7—H7B109.00
C2—N1—C6127.60 (16)C8—C7—H7A109.00
C5—N1—C6124.87 (16)C8—C7—H7B109.00
C2—N3—C4105.97 (16)H7A—C7—H7B108.00
N1—C2—N3110.93 (17)C7—C8—H8A109.00
N1—C2—C11125.82 (18)C7—C8—H8B109.00
N3—C2—C11122.92 (17)C9—C8—H8A109.00
N3—C4—C5110.47 (17)C9—C8—H8B109.00
N3—C4—C17119.95 (17)H8A—C8—H8B108.00
C5—C4—C17129.58 (18)C8—C9—H9A109.00
N1—C5—C4105.36 (17)C8—C9—H9B109.00
N1—C5—C23121.90 (17)C10—C9—H9A109.00
C4—C5—C23132.71 (19)C10—C9—H9B109.00
N1—C6—C7111.31 (16)H9A—C9—H9B108.00
C6—C7—C8113.10 (16)C9—C10—H10A109.00
C7—C8—C9113.60 (17)C9—C10—H10B109.00
C8—C9—C10113.21 (19)C9—C10—H10C110.00
C2—C11—C12124.08 (18)H10A—C10—H10B109.00
C2—C11—C16117.69 (18)H10A—C10—H10C109.00
C12—C11—C16118.23 (18)H10B—C10—H10C109.00
C11—C12—C13120.99 (19)C11—C12—H12119.00
C12—C13—C14119.1 (2)C13—C12—H12120.00
Cl1—C14—C13119.34 (19)C12—C13—H13120.00
Cl1—C14—C15119.46 (17)C14—C13—H13120.00
C13—C14—C15121.2 (2)C14—C15—H15120.00
C14—C15—C16119.20 (19)C16—C15—H15120.00
C11—C16—C15121.28 (19)C11—C16—H16119.00
C4—C17—C18119.97 (19)C15—C16—H16119.00
C4—C17—C22121.91 (18)C17—C18—H18120.00
C18—C17—C22118.1 (2)C19—C18—H18120.00
C17—C18—C19120.6 (2)C18—C19—H19120.00
C18—C19—C20120.4 (2)C20—C19—H19120.00
C19—C20—C21119.6 (2)C19—C20—H20120.00
C20—C21—C22120.5 (2)C21—C20—H20120.00
C17—C22—C21120.8 (2)C20—C21—H21120.00
C5—C23—C24119.91 (19)C22—C21—H21120.00
C5—C23—C28121.60 (19)C17—C22—H22120.00
C24—C23—C28118.5 (2)C21—C22—H22120.00
C23—C24—C25120.6 (2)C23—C24—H24120.00
C24—C25—C26120.4 (2)C25—C24—H24120.00
C25—C26—C27119.5 (2)C24—C25—H25120.00
C26—C27—C28120.2 (2)C26—C25—H25120.00
C23—C28—C27120.7 (2)C25—C26—H26120.00
N1—C6—H6A109.00C27—C26—H26120.00
N1—C6—H6B109.00C26—C27—H27120.00
C7—C6—H6A109.00C28—C27—H27120.00
C7—C6—H6B109.00C23—C28—H28120.00
H6A—C6—H6B108.00C27—C28—H28120.00
C6—C7—H7A109.00
C5—N1—C2—N3−0.3 (2)N1—C6—C7—C8−168.61 (16)
C5—N1—C2—C11−173.78 (19)C6—C7—C8—C9179.75 (18)
C6—N1—C2—N3−174.66 (18)C7—C8—C9—C10−176.82 (19)
C6—N1—C2—C1111.9 (3)C2—C11—C12—C13178.54 (19)
C2—N1—C5—C4−0.2 (2)C16—C11—C12—C13−1.8 (3)
C2—N1—C5—C23−178.41 (18)C2—C11—C16—C15−178.87 (19)
C6—N1—C5—C4174.38 (17)C12—C11—C16—C151.4 (3)
C6—N1—C5—C23−3.9 (3)C11—C12—C13—C141.0 (3)
C2—N1—C6—C794.4 (2)C12—C13—C14—Cl1178.44 (17)
C5—N1—C6—C7−79.0 (2)C12—C13—C14—C150.2 (3)
C4—N3—C2—N10.7 (2)Cl1—C14—C15—C16−178.79 (17)
C4—N3—C2—C11174.34 (18)C13—C14—C15—C16−0.5 (3)
C2—N3—C4—C5−0.8 (2)C14—C15—C16—C11−0.3 (3)
C2—N3—C4—C17179.98 (19)C4—C17—C18—C19178.5 (2)
N1—C2—C11—C12−45.1 (3)C22—C17—C18—C190.2 (3)
N1—C2—C11—C16135.2 (2)C4—C17—C22—C21−178.4 (2)
N3—C2—C11—C12142.2 (2)C18—C17—C22—C21−0.1 (3)
N3—C2—C11—C16−37.5 (3)C17—C18—C19—C20−0.5 (4)
N3—C4—C5—N10.6 (2)C18—C19—C20—C210.7 (4)
N3—C4—C5—C23178.6 (2)C19—C20—C21—C22−0.6 (4)
C17—C4—C5—N1179.72 (19)C20—C21—C22—C170.3 (4)
C17—C4—C5—C23−2.3 (4)C5—C23—C24—C25179.5 (2)
N3—C4—C17—C18−29.6 (3)C28—C23—C24—C25−0.5 (3)
N3—C4—C17—C22148.7 (2)C5—C23—C28—C27−179.6 (2)
C5—C4—C17—C18151.4 (2)C24—C23—C28—C270.4 (3)
C5—C4—C17—C22−30.4 (3)C23—C24—C25—C260.2 (4)
N1—C5—C23—C24111.6 (2)C24—C25—C26—C270.2 (4)
N1—C5—C23—C28−68.3 (3)C25—C26—C27—C28−0.3 (4)
C4—C5—C23—C24−66.1 (3)C26—C27—C28—C230.0 (4)
C4—C5—C23—C28114.0 (3)
D—H···AD—HH···AD···AD—H···A
C20—H20···C25i0.953.003.887 (3)157
C24—H24···C13ii0.952.783.697 (3)163
C28—H28···N3iii0.952.883.444 (3)119
C28—H28···C17iii0.953.003.894 (3)158
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C20—H20⋯C25i 0.953.003.887 (3)157
C24—H24⋯C13ii 0.952.783.697 (3)163
C28—H28⋯N3iii 0.952.883.444 (3)119
C28—H28⋯C17iii 0.953.003.894 (3)158

Symmetry codes: (i) ; (ii) ; (iii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Efficient synthesis of imidazoles from aldehydes and 1,2-diketones using microwave irradiation.

Authors:  Scott E Wolkenberg; David D Wisnoski; William H Leister; Yi Wang; Zhijian Zhao; Craig W Lindsley
Journal:  Org Lett       Date:  2004-04-29       Impact factor: 6.005

3.  2-(2,6-Di-chloro-phen-yl)-1-pentyl-4,5-diphenyl-1H-imidazole.

Authors:  Mehmet Akkurt; Shaaban K Mohamed; Kuldip Singh; Adel A Marzouk; Antar A Abdelhamid
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-05-11

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total
  3 in total

1.  Crystal structure of 1-[2-(4-chloro-phen-yl)-4,5-diphenyl-1H-imidazol-1-yl]propan-2-ol.

Authors:  Shaaban K Mohamed; Adel A Marzouk; Mustafa R Albayati; Antar A Abdelhamid; Jim Simpson
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2017-01-01

2.  Crystal structure of 1-[2-(4-nitro-phen-yl)-4,5-diphenyl-1H-imidazol-1-yl]propan-2-ol.

Authors:  Jim Simpson; Shaaban K Mohamed; Adel A Marzouk; Antar A Abdelhamid; Mustafa R Albayati
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2017-08-30

3.  2-(4-Bromo-phen-yl)-1-pentyl-4,5-diphenyl-1H-imidazole.

Authors:  Shaaban K Mohamed; Mehmet Akkurt; Kuldip Singh; Adel A Marzouk; Mustafa R Albayati
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-08-14
  3 in total

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