Literature DB >> 24109321

N-Butanoyl-N-(3-chloro-1,4-dioxonaph-thalen-2-yl)butanamide.

Ray J Butcher1, Solomon Berhe, Alan J Anderson, Oladapo Bakare.   

Abstract

In the title compound, C18H18ClNO4, the imide group with its two alkyl substituents is approximately perpendicular to the plane of the naphtho-quinone ring system [dihedral angle = 78.5 (1)°]. Further, the imide carbonyl groups are oriented in an anti sense. In the crystal, the substituted naphtho-quinone rings form π-π stacks in the a-axis direction [perpendicular centroid-centroid distance = 3.209 (2) Å and slippage = 4.401 Å].

Entities:  

Year:  2013        PMID: 24109321      PMCID: PMC3793734          DOI: 10.1107/S1600536813016401

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis and biological evaluation of some imido-substituted 1,4-naphtho­quinone derivatives, see; Bakare et al. (2003 ▶); Berhe et al. (2008 ▶); Brandy et al. (2013 ▶). For the anti-cancer and anti-trypanosomal activity of the title compound, see; Bakare et al. (2003 ▶); Berhe et al. (2008 ▶); Khraiwesh et al. (2012 ▶).

Experimental

Crystal data

C18H18ClNO4 M = 347.78 Triclinic, a = 8.1717 (10) Å b = 8.3117 (10) Å c = 14.6841 (15) Å α = 93.119 (9)° β = 98.369 (10)° γ = 118.043 (12)° V = 862.23 (17) Å3 Z = 2 Cu Kα radiation μ = 2.15 mm−1 T = 295 K 0.36 × 0.28 × 0.08 mm

Data collection

Agilent Xcalibur (Ruby, Gemini) diffractometer Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012 ▶) T min = 0.530, T max = 1.000 5454 measured reflections 3398 independent reflections 2122 reflections with I > 2σ(I) R int = 0.043

Refinement

R[F 2 > 2σ(F 2)] = 0.077 wR(F 2) = 0.227 S = 1.12 3398 reflections 219 parameters H-atom parameters constrained Δρmax = 0.39 e Å−3 Δρmin = −0.24 e Å−3 Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813016401/hg5322sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813016401/hg5322Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813016401/hg5322Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H18ClNO4Z = 2
Mr = 347.78F(000) = 364
Triclinic, P1Dx = 1.340 Mg m3
Hall symbol: -P 1Cu Kα radiation, λ = 1.54178 Å
a = 8.1717 (10) ÅCell parameters from 1350 reflections
b = 8.3117 (10) Åθ = 3.1–75.5°
c = 14.6841 (15) ŵ = 2.15 mm1
α = 93.119 (9)°T = 295 K
β = 98.369 (10)°Plate, pale yellow
γ = 118.043 (12)°0.36 × 0.28 × 0.08 mm
V = 862.23 (17) Å3
Agilent Xcalibur (Ruby, Gemini) diffractometer3398 independent reflections
Radiation source: Enhance (Cu) X-ray Source2122 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.043
Detector resolution: 10.5081 pixels mm-1θmax = 75.7°, θmin = 3.1°
ω scansh = −8→10
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012)k = −10→8
Tmin = 0.530, Tmax = 1.000l = −18→18
5454 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.077Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.227H-atom parameters constrained
S = 1.12w = 1/[σ2(Fo2) + (0.0739P)2 + 0.4803P] where P = (Fo2 + 2Fc2)/3
3398 reflections(Δ/σ)max < 0.001
219 parametersΔρmax = 0.39 e Å3
0 restraintsΔρmin = −0.24 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.4121 (2)0.34538 (16)0.17915 (8)0.0891 (4)
O10.2762 (5)0.3535 (4)−0.0134 (2)0.0844 (9)
O20.4177 (5)0.9507 (4)0.2097 (2)0.0938 (11)
O30.7195 (7)0.7372 (8)0.4060 (3)0.1463 (19)
O40.1712 (5)0.5863 (5)0.3023 (2)0.0968 (11)
N10.4736 (5)0.6864 (5)0.2928 (2)0.0706 (9)
C10.3740 (6)0.5151 (5)0.1381 (3)0.0639 (10)
C20.2990 (6)0.4877 (5)0.0361 (3)0.0662 (10)
C30.2519 (6)0.6265 (5)0.0005 (2)0.0607 (9)
C40.1688 (6)0.6021 (6)−0.0927 (3)0.0722 (11)
H4A0.14530.4994−0.13250.087*
C50.1217 (7)0.7286 (7)−0.1261 (3)0.0855 (13)
H5A0.06610.7112−0.18830.103*
C60.1562 (8)0.8814 (7)−0.0680 (3)0.0886 (14)
H6A0.12300.9664−0.09090.106*
C70.2399 (7)0.9083 (6)0.0240 (3)0.0785 (12)
H7A0.26491.01260.06280.094*
C80.2869 (6)0.7820 (5)0.0590 (2)0.0622 (9)
C90.3728 (6)0.8109 (5)0.1584 (3)0.0680 (10)
C100.4067 (6)0.6633 (5)0.1942 (2)0.0622 (10)
C110.6690 (8)0.7503 (8)0.3266 (3)0.0961 (16)
C120.7987 (8)0.8295 (9)0.2605 (4)0.1059 (18)
H12A0.77380.92130.23310.127*
H12B0.76750.73230.21080.127*
C131.0076 (11)0.9175 (12)0.2999 (6)0.142 (3)
H13A1.03100.83160.33430.171*
H13B1.07470.93850.24870.171*
C141.0836 (12)1.0872 (13)0.3596 (6)0.174 (4)
H14A1.21231.12560.38760.261*
H14B1.01061.07120.40730.261*
H14C1.07911.17920.32410.261*
C150.3333 (8)0.6480 (7)0.3445 (3)0.0796 (12)
C160.3897 (9)0.6902 (10)0.4493 (3)0.1102 (19)
H16A0.43040.60450.47160.132*
H16B0.49760.81290.46560.132*
C170.2496 (10)0.6815 (14)0.4964 (4)0.149 (3)
H17A0.14050.56000.47840.179*
H17B0.21160.76960.47510.179*
C180.2999 (10)0.7179 (11)0.6009 (4)0.131 (2)
H18A0.19240.70520.62540.197*
H18B0.40290.84060.62040.197*
H18C0.33660.63110.62360.197*
U11U22U33U12U13U23
Cl10.1260 (11)0.0735 (7)0.0734 (7)0.0587 (7)0.0014 (6)0.0018 (5)
O10.118 (3)0.0700 (17)0.0620 (16)0.0477 (18)0.0066 (16)−0.0132 (13)
O20.142 (3)0.0725 (18)0.0629 (17)0.061 (2)−0.0114 (18)−0.0161 (14)
O30.135 (4)0.212 (5)0.079 (3)0.083 (4)−0.015 (2)0.023 (3)
O40.100 (3)0.121 (3)0.0619 (18)0.048 (2)0.0175 (18)−0.0028 (18)
N10.087 (2)0.074 (2)0.0479 (16)0.0428 (19)−0.0014 (16)−0.0036 (14)
C10.075 (3)0.058 (2)0.057 (2)0.0337 (19)0.0084 (18)0.0011 (16)
C20.076 (3)0.062 (2)0.052 (2)0.028 (2)0.0118 (18)−0.0076 (16)
C30.065 (2)0.062 (2)0.0489 (18)0.0283 (18)0.0065 (16)−0.0022 (15)
C40.083 (3)0.077 (3)0.048 (2)0.035 (2)0.0066 (19)−0.0033 (18)
C50.098 (3)0.096 (3)0.055 (2)0.046 (3)0.000 (2)0.008 (2)
C60.111 (4)0.087 (3)0.070 (3)0.053 (3)0.003 (3)0.015 (2)
C70.101 (3)0.069 (2)0.063 (2)0.045 (2)0.001 (2)−0.0012 (19)
C80.071 (2)0.061 (2)0.0501 (19)0.0311 (19)0.0041 (17)0.0001 (15)
C90.084 (3)0.061 (2)0.052 (2)0.034 (2)0.0034 (18)−0.0068 (16)
C100.073 (3)0.062 (2)0.0454 (18)0.0316 (19)0.0012 (16)−0.0035 (15)
C110.109 (4)0.107 (4)0.064 (3)0.057 (3)−0.016 (3)−0.006 (3)
C120.087 (4)0.125 (5)0.084 (3)0.039 (3)0.005 (3)−0.009 (3)
C130.128 (6)0.169 (7)0.131 (6)0.084 (6)−0.009 (5)0.007 (5)
C140.145 (7)0.175 (8)0.126 (6)0.035 (6)−0.032 (5)0.002 (6)
C150.101 (4)0.087 (3)0.054 (2)0.052 (3)0.003 (2)−0.003 (2)
C160.131 (5)0.149 (5)0.056 (3)0.075 (4)0.011 (3)0.001 (3)
C170.131 (5)0.253 (9)0.055 (3)0.090 (6)0.014 (3)−0.003 (4)
C180.140 (6)0.185 (7)0.057 (3)0.072 (5)0.015 (3)−0.002 (4)
Cl1—C11.703 (4)C9—C101.484 (5)
O1—C21.218 (4)C11—C121.487 (8)
O2—C91.215 (4)C12—C131.508 (8)
O3—C111.207 (6)C12—H12A0.9700
O4—C151.221 (6)C12—H12B0.9700
N1—C151.389 (6)C13—C141.424 (10)
N1—C111.422 (6)C13—H13A0.9700
N1—C101.440 (4)C13—H13B0.9700
C1—C101.335 (5)C14—H14A0.9600
C1—C21.496 (5)C14—H14B0.9600
C2—C31.475 (6)C14—H14C0.9600
C3—C41.395 (5)C15—C161.512 (6)
C3—C81.397 (5)C16—C171.397 (8)
C4—C51.369 (6)C16—H16A0.9700
C4—H4A0.9300C16—H16B0.9700
C5—C61.377 (7)C17—C181.505 (7)
C5—H5A0.9300C17—H17A0.9700
C6—C71.377 (6)C17—H17B0.9700
C6—H6A0.9300C18—H18A0.9600
C7—C81.376 (6)C18—H18B0.9600
C7—H7A0.9300C18—H18C0.9600
C8—C91.479 (5)
C15—N1—C11127.5 (4)C13—C12—H12A108.1
C15—N1—C10113.5 (4)C11—C12—H12B108.1
C11—N1—C10119.0 (4)C13—C12—H12B108.1
C10—C1—C2121.8 (4)H12A—C12—H12B107.3
C10—C1—Cl1121.9 (3)C14—C13—C12114.9 (7)
C2—C1—Cl1116.3 (3)C14—C13—H13A108.5
O1—C2—C3122.9 (4)C12—C13—H13A108.5
O1—C2—C1120.0 (4)C14—C13—H13B108.5
C3—C2—C1117.0 (3)C12—C13—H13B108.5
C4—C3—C8119.0 (4)H13A—C13—H13B107.5
C4—C3—C2119.9 (3)C13—C14—H14A109.5
C8—C3—C2121.1 (3)C13—C14—H14B109.5
C5—C4—C3120.4 (4)H14A—C14—H14B109.5
C5—C4—H4A119.8C13—C14—H14C109.5
C3—C4—H4A119.8H14A—C14—H14C109.5
C4—C5—C6120.4 (4)H14B—C14—H14C109.5
C4—C5—H5A119.8O4—C15—N1117.7 (4)
C6—C5—H5A119.8O4—C15—C16123.7 (5)
C5—C6—C7119.9 (4)N1—C15—C16118.6 (5)
C5—C6—H6A120.0C17—C16—C15115.8 (5)
C7—C6—H6A120.0C17—C16—H16A108.3
C8—C7—C6120.6 (4)C15—C16—H16A108.3
C8—C7—H7A119.7C17—C16—H16B108.3
C6—C7—H7A119.7C15—C16—H16B108.3
C7—C8—C3119.8 (4)H16A—C16—H16B107.4
C7—C8—C9119.9 (3)C16—C17—C18117.0 (6)
C3—C8—C9120.3 (4)C16—C17—H17A108.1
O2—C9—C8122.0 (4)C18—C17—H17A108.1
O2—C9—C10120.3 (4)C16—C17—H17B108.1
C8—C9—C10117.6 (3)C18—C17—H17B108.1
C1—C10—N1121.5 (4)H17A—C17—H17B107.3
C1—C10—C9121.9 (3)C17—C18—H18A109.5
N1—C10—C9116.6 (3)C17—C18—H18B109.5
O3—C11—N1118.8 (6)H18A—C18—H18B109.5
O3—C11—C12124.2 (6)C17—C18—H18C109.5
N1—C11—C12117.0 (4)H18A—C18—H18C109.5
C11—C12—C13116.7 (5)H18B—C18—H18C109.5
C11—C12—H12A108.1
C10—C1—C2—O1177.8 (4)C2—C1—C10—C9−0.7 (6)
Cl1—C1—C2—O1−3.1 (6)Cl1—C1—C10—C9−179.8 (3)
C10—C1—C2—C3−3.5 (6)C15—N1—C10—C1−102.5 (5)
Cl1—C1—C2—C3175.6 (3)C11—N1—C10—C179.8 (5)
O1—C2—C3—C43.2 (6)C15—N1—C10—C976.4 (5)
C1—C2—C3—C4−175.4 (4)C11—N1—C10—C9−101.2 (5)
O1—C2—C3—C8−177.6 (4)O2—C9—C10—C1−174.2 (4)
C1—C2—C3—C83.7 (6)C8—C9—C10—C14.7 (6)
C8—C3—C4—C5−0.3 (7)O2—C9—C10—N16.8 (6)
C2—C3—C4—C5178.9 (4)C8—C9—C10—N1−174.3 (4)
C3—C4—C5—C60.1 (8)C15—N1—C11—O316.4 (8)
C4—C5—C6—C70.5 (8)C10—N1—C11—O3−166.3 (5)
C5—C6—C7—C8−1.1 (8)C15—N1—C11—C12−163.7 (5)
C6—C7—C8—C30.9 (7)C10—N1—C11—C1213.6 (7)
C6—C7—C8—C9−178.6 (5)O3—C11—C12—C13−7.2 (10)
C4—C3—C8—C7−0.3 (6)N1—C11—C12—C13172.9 (5)
C2—C3—C8—C7−179.4 (4)C11—C12—C13—C14−70.9 (9)
C4—C3—C8—C9179.3 (4)C11—N1—C15—O4−176.9 (4)
C2—C3—C8—C90.1 (6)C10—N1—C15—O45.7 (6)
C7—C8—C9—O2−5.9 (7)C11—N1—C15—C165.1 (7)
C3—C8—C9—O2174.5 (4)C10—N1—C15—C16−172.3 (4)
C7—C8—C9—C10175.3 (4)O4—C15—C16—C17−9.5 (10)
C3—C8—C9—C10−4.3 (6)N1—C15—C16—C17168.4 (6)
C2—C1—C10—N1178.2 (4)C15—C16—C17—C18178.4 (7)
Cl1—C1—C10—N1−0.9 (6)
  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Antitrypanosomal activities and cytotoxicity of some novel imido-substituted 1,4-naphthoquinone derivatives.

Authors:  Mozna H Khraiwesh; Clarence M Lee; Yakini Brandy; Emmanuel S Akinboye; Solomon Berhe; Genelle Gittens; Muneer M Abbas; Franklin R Ampy; Mohammad Ashraf; Oladapo Bakare
Journal:  Arch Pharm Res       Date:  2012-02-02       Impact factor: 4.946

3.  Synthesis and MEK1 inhibitory activities of imido-substituted 2-chloro-1,4-naphthoquinones.

Authors:  Oladapo Bakare; Curtis L Ashendel; Hairuo Peng; Leon H Zalkow; Edward M Burgess
Journal:  Bioorg Med Chem       Date:  2003-07-17       Impact factor: 3.641

4.  Synthesis and characterization of novel unsymmetrical and symmetrical 3-halo- or 3-methoxy-substituted 2-dibenzoylamino-1,4-naphthoquinone derivatives.

Authors:  Yakini Brandy; Nailah Brandy; Emmanuel Akinboye; Malik Lewis; Claudia Mouamba; Seshat Mack; Ray J Butcher; Alan J Anderson; Oladapo Bakare
Journal:  Molecules       Date:  2013-02-04       Impact factor: 4.411

  4 in total
  1 in total

1.  N-(3-Chloro-1,4-dioxo-1,4-di-hydro-naph-thalen-2-yl)-N-propionylpropionamide.

Authors:  Nabil Idris; Ray J Butcher; Oladapo Bakare
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-01-04
  1 in total

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