| Literature DB >> 24109311 |
Chong Tian1, Wanli Nie, Maxim V Borzov.
Abstract
The title compound, 6C5H9N2 (+)·3SiF6 (2-)·CH3OH, (I), was prepared by recrystallization of the crude salt from methanol along with solvent-free 2C5H9N2 (+)·SiF6 (2-) (II). Crystals of these solvatomorphs can be separated manually. The solvate (I) crystallizes in a rare hexa-gonal space group P6/mcc. Its asymmetric unit comprises one half of an imidazolium cation bis-ected by the crystallographic m-plane, one-sixth and one-twelfth of two crystallographically independent SiF6 (2-) dianions (Si atoms are located on the 3.2 and 6/m inversion centres), and one-twelfth of a methanol mol-ecule (C atoms are situated on the 622 inversion centres, other atoms are disordered between general positions). In (I), all F atoms of 3.2-located SiF6 (2-) dianions participate in the formation of symmetry-equivalent contacts to the H atoms of imidazolium fragments, thus forming rod-type ensembles positioned on the -6 axes. These 'pillar' rods are, in turn, F⋯H inter-linked through SiF6 (2-) dianions disordered around the 6/m centres. The twelvefold disordered methanol mol-ecules are appended to this array by O-H⋯F hydrogen bonds to the 6/m located SiF6 (2-) dianions. In terms of graph-set notation, the first and second level networks in (I) are N 1 = C 2 (2)(7)[3R 4 (4)(14)]D 2 (2)(4) and N 2 = D 2 (2)(5) (C-H⋯O hydrogen bonds are not considered). After locating all symmetrically independent atoms in the cation and anions, there remained a strong (> 3 e Å(-3)) residual electron density peak located at the 622 inversion centre. Treatment of this pre-refined model with the SQUEEZE procedure in PLATON [Spek (2009). Acta Cryst. D65, 148-155] revealed two voids per unit cell, indicative of the presence of the solvent methanol mol-ecule disordered about the 622 inversion centre.Entities:
Year: 2013 PMID: 24109311 PMCID: PMC3793724 DOI: 10.1107/S1600536813018230
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| 6C5H9N2+·3SiF62−·CH4O | |
| Melting point: 550 K | |
| Hexagonal, | Mo |
| Hall symbol: -P 6 2c | Cell parameters from 4399 reflections |
| θ = 2.4–28.0° | |
| µ = 0.22 mm−1 | |
| Block, yellow | |
| 0.32 × 0.20 × 0.15 mm |
| Bruker SMART APEXII diffractometer | 804 independent reflections |
| Radiation source: fine-focus sealed tube | 623 reflections with |
| Graphite monochromator | |
| Detector resolution: 8.333 pixels mm-1 | θmax = 26.0°, θmin = 1.9° |
| phi and ω scans | |
| Absorption correction: multi-scan ( | |
| 11115 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 804 reflections | (Δ/σ)max < 0.001 |
| 75 parameters | Δρmax = 0.15 e Å−3 |
| 0 restraints | Δρmin = −0.41 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| N1 | 0.32338 (12) | 0.39168 (13) | 0.06402 (9) | 0.0388 (4) | |
| C1 | 0.2983 (2) | 0.3220 (2) | 0.0000 | 0.0404 (6) | |
| H1 | 0.266 (2) | 0.237 (3) | 0.0000 | 0.051 (7)* | |
| C2 | 0.36659 (17) | 0.51001 (18) | 0.03979 (11) | 0.0430 (4) | |
| H2 | 0.389 (2) | 0.571 (2) | 0.0769 (12) | 0.056 (6)* | |
| C3 | 0.3094 (2) | 0.3496 (2) | 0.14668 (13) | 0.0560 (6) | |
| H3BD | 0.2418 | 0.2678 | 0.1504 | 0.084* | 0.84 (3) |
| H3BE | 0.2946 | 0.4023 | 0.1801 | 0.084* | 0.84 (3) |
| H3BF | 0.3825 | 0.3511 | 0.1636 | 0.084* | 0.84 (3) |
| H3AA | 0.2256 | 0.2899 | 0.1564 | 0.084* | 0.16 (3) |
| H3AB | 0.3337 | 0.4176 | 0.1819 | 0.084* | 0.16 (3) |
| H3AC | 0.3597 | 0.3139 | 0.1558 | 0.084* | 0.16 (3) |
| Si1 | 0.0000 | 0.0000 | 0.0000 | 0.0319 (4) | |
| F1 | 0.12523 (16) | 0.0637 (2) | 0.05780 (10) | 0.0459 (5) | 0.50 |
| Si2 | 0.6667 | 0.3333 | 0.2500 | 0.0318 (3) | |
| F2 | 0.55741 (10) | 0.33189 (10) | 0.19222 (6) | 0.0525 (4) | |
| C4 | 0.0000 | 0.0000 | 0.2500 | 0.115 (4) | |
| H4A | 0.0030 | 0.0004 | 0.3070 | 0.138* | 0.0833333 |
| H4B | −0.0606 | −0.0794 | 0.2318 | 0.138* | 0.0833333 |
| H4C | −0.0207 | 0.0595 | 0.2322 | 0.138* | 0.0833333 |
| O1 | 0.102 (5) | 0.025 (17) | 0.2226 (9) | 0.115 (19) | 0.0833333 |
| H1A | 0.1086 | 0.0345 | 0.1725 | 0.138* | 0.0833333 |
| N1 | 0.0411 (8) | 0.0412 (8) | 0.0345 (8) | 0.0209 (7) | 0.0001 (6) | 0.0030 (6) |
| C1 | 0.0377 (13) | 0.0359 (14) | 0.0443 (15) | 0.0159 (11) | 0.000 | 0.000 |
| C2 | 0.0544 (11) | 0.0407 (10) | 0.0386 (9) | 0.0273 (9) | −0.0032 (8) | −0.0029 (8) |
| C3 | 0.0683 (13) | 0.0664 (13) | 0.0373 (10) | 0.0367 (11) | 0.0040 (9) | 0.0137 (9) |
| Si1 | 0.0316 (5) | 0.0316 (5) | 0.0324 (8) | 0.0158 (3) | 0.000 | 0.000 |
| F1 | 0.0390 (10) | 0.0499 (13) | 0.0438 (11) | 0.0184 (11) | −0.0091 (9) | −0.0027 (10) |
| Si2 | 0.0362 (4) | 0.0362 (4) | 0.0230 (5) | 0.0181 (2) | 0.000 | 0.000 |
| F2 | 0.0504 (7) | 0.0644 (7) | 0.0466 (7) | 0.0316 (6) | −0.0081 (5) | 0.0106 (5) |
| C4 | 0.145 (7) | 0.145 (7) | 0.056 (7) | 0.072 (4) | 0.000 | 0.000 |
| O1 | 0.08 (2) | 0.21 (5) | 0.048 (10) | 0.07 (4) | −0.005 (19) | −0.04 (5) |
| N1—C1 | 1.326 (2) | C3—H3AA | 0.9600 |
| N1—C2 | 1.375 (2) | C3—H3AB | 0.9600 |
| N1—C3 | 1.467 (2) | C3—H3AC | 0.9600 |
| C1—N1i | 1.326 (2) | Si1—F1 | 1.6821 (17) |
| C1—H1 | 0.94 (3) | Si2—F2 | 1.6829 (10) |
| C2—C2i | 1.338 (4) | C4—O1 | 1.25 (2) |
| C2—H2 | 0.92 (2) | C4—H4A | 0.9600 |
| C3—H3BD | 0.9600 | C4—H4B | 0.9600 |
| C3—H3BE | 0.9600 | C4—H4C | 0.9600 |
| C3—H3BF | 0.9600 | O1—H1A | 0.8498 |
| C1—N1—C2 | 108.46 (16) | O1x—C4—O1ix | 55.4 (3) |
| C1—N1—C3 | 125.63 (17) | O1xiv—C4—O1xvii | 55.4 (3) |
| C2—N1—C3 | 125.90 (16) | O1x—C4—O1xvii | 150 (10) |
| N1i—C1—N1 | 108.6 (2) | O1ix—C4—O1xvii | 96 (10) |
| N1i—C1—H1 | 125.69 (12) | O1xiv—C4—O1xviii | 136.8 (15) |
| N1—C1—H1 | 125.69 (12) | O1x—C4—O1xviii | 51 (10) |
| C2i—C2—N1 | 107.25 (10) | O1ix—C4—O1xviii | 53 (10) |
| C2i—C2—H2 | 132.8 (13) | O1xvii—C4—O1xviii | 107.3 (8) |
| N1—C2—H2 | 120.0 (13) | O1xiv—C4—O1iii | 51 (10) |
| N1—C3—H3BD | 109.5 | O1x—C4—O1iii | 136.8 (15) |
| N1—C3—H3BE | 109.5 | O1ix—C4—O1iii | 107.3 (8) |
| H3BD—C3—H3BE | 109.5 | O1xvii—C4—O1iii | 53 (10) |
| N1—C3—H3BF | 109.5 | O1xviii—C4—O1iii | 154 (10) |
| H3BD—C3—H3BF | 109.5 | O1xiv—C4—O1vi | 100 (10) |
| H3BE—C3—H3BF | 109.5 | O1x—C4—O1vi | 55.4 (3) |
| N1—C3—H3AA | 109.5 | O1ix—C4—O1vi | 107.3 (8) |
| N1—C3—H3AB | 109.5 | O1xvii—C4—O1vi | 154 (10) |
| H3AA—C3—H3AB | 109.5 | O1xviii—C4—O1vi | 96 (10) |
| N1—C3—H3AC | 109.5 | O1iii—C4—O1vi | 107.3 (8) |
| H3AA—C3—H3AC | 109.5 | O1xiv—C4—O1xix | 55.4 (3) |
| H3AB—C3—H3AC | 109.5 | O1x—C4—O1xix | 100 (10) |
| F1ii—Si1—F1iii | 180.00 (19) | O1ix—C4—O1xix | 154 (10) |
| F1ii—Si1—F1iv | 48.16 (4) | O1xvii—C4—O1xix | 107.3 (8) |
| F1iii—Si1—F1iv | 131.84 (4) | O1xviii—C4—O1xix | 107.3 (8) |
| F1ii—Si1—F1v | 89.94 (9) | O1iii—C4—O1xix | 96 (10) |
| F1iii—Si1—F1v | 90.06 (9) | O1vi—C4—O1xix | 53 (10) |
| F1iv—Si1—F1v | 48.16 (4) | O1xiv—C4—O1xx | 107.3 (8) |
| F1ii—Si1—F1vi | 90.06 (9) | O1x—C4—O1xx | 53 (10) |
| F1iii—Si1—F1vi | 89.94 (9) | O1ix—C4—O1xx | 100 (10) |
| F1iv—Si1—F1vi | 131.84 (4) | O1xvii—C4—O1xx | 136.8 (15) |
| F1v—Si1—F1vi | 180.00 (13) | O1xviii—C4—O1xx | 55.4 (3) |
| F1ii—Si1—F1vii | 131.84 (4) | O1iii—C4—O1xx | 150 (10) |
| F1iii—Si1—F1vii | 48.16 (4) | O1vi—C4—O1xx | 51 (10) |
| F1iv—Si1—F1vii | 90.06 (9) | O1xix—C4—O1xx | 55.4 (3) |
| F1v—Si1—F1vii | 70.61 (12) | O1xiv—C4—O1xxi | 107.3 (8) |
| F1vi—Si1—F1vii | 109.39 (12) | O1x—C4—O1xxi | 96 (10) |
| F1ii—Si1—F1viii | 48.16 (4) | O1ix—C4—O1xxi | 51 (10) |
| F1iii—Si1—F1viii | 131.84 (4) | O1xvii—C4—O1xxi | 55.4 (3) |
| F1iv—Si1—F1viii | 89.94 (9) | O1xviii—C4—O1xxi | 55.4 (3) |
| F1v—Si1—F1viii | 109.39 (12) | O1iii—C4—O1xxi | 100 (10) |
| F1vi—Si1—F1viii | 70.61 (12) | O1vi—C4—O1xxi | 150 (10) |
| F1vii—Si1—F1viii | 180.00 (13) | O1xix—C4—O1xxi | 136.8 (15) |
| F1ii—Si1—F1ix | 90.06 (9) | O1xx—C4—O1xxi | 107.3 (8) |
| F1iii—Si1—F1ix | 89.94 (9) | O1xiv—C4—O1vii | 96 (10) |
| F1iv—Si1—F1ix | 70.61 (12) | O1x—C4—O1vii | 107.3 (8) |
| F1v—Si1—F1ix | 90.06 (9) | O1ix—C4—O1vii | 55.4 (3) |
| F1vi—Si1—F1ix | 89.94 (9) | O1xvii—C4—O1vii | 51 (10) |
| F1vii—Si1—F1ix | 48.16 (4) | O1xviii—C4—O1vii | 100 (10) |
| F1viii—Si1—F1ix | 131.84 (4) | O1iii—C4—O1vii | 55.4 (3) |
| F1ii—Si1—F1i | 89.94 (9) | O1vi—C4—O1vii | 136.8 (15) |
| F1iii—Si1—F1i | 90.06 (9) | O1xix—C4—O1vii | 150 (10) |
| F1iv—Si1—F1i | 109.39 (12) | O1xx—C4—O1vii | 154 (10) |
| F1v—Si1—F1i | 89.94 (9) | O1xxi—C4—O1vii | 53 (10) |
| F1vi—Si1—F1i | 90.06 (9) | O1xiv—C4—O1 | 53 (10) |
| F1vii—Si1—F1i | 131.84 (4) | O1x—C4—O1 | 107.3 (8) |
| F1viii—Si1—F1i | 48.16 (4) | O1ix—C4—O1 | 136.8 (15) |
| F1ix—Si1—F1i | 180.00 (14) | O1xvii—C4—O1 | 100 (10) |
| F1ii—Si1—F1x | 70.61 (12) | O1xviii—C4—O1 | 150 (10) |
| F1iii—Si1—F1x | 109.39 (12) | O1iii—C4—O1 | 55.4 (3) |
| F1iv—Si1—F1x | 90.06 (9) | O1vi—C4—O1 | 55.4 (3) |
| F1v—Si1—F1x | 131.84 (4) | O1xix—C4—O1 | 51 (10) |
| F1vi—Si1—F1x | 48.16 (4) | O1xx—C4—O1 | 96 (10) |
| F1vii—Si1—F1x | 89.94 (9) | O1xxi—C4—O1 | 154 (10) |
| F1viii—Si1—F1x | 90.06 (9) | O1vii—C4—O1 | 107.3 (8) |
| F1ix—Si1—F1x | 48.16 (4) | O1xiv—C4—H4A | 66.7 |
| F1i—Si1—F1x | 131.84 (4) | O1x—C4—H4A | 112.4 |
| F1ii—Si1—F1xi | 109.39 (12) | O1ix—C4—H4A | 113.7 |
| F1iii—Si1—F1xi | 70.61 (12) | O1xvii—C4—H4A | 68.7 |
| F1iv—Si1—F1xi | 89.94 (9) | O1xviii—C4—H4A | 70.1 |
| F1v—Si1—F1xi | 48.16 (4) | O1iii—C4—H4A | 110.7 |
| F1vi—Si1—F1xi | 131.84 (4) | O1vi—C4—H4A | 110.3 |
| F1vii—Si1—F1xi | 90.06 (9) | O1xix—C4—H4A | 66.4 |
| F1viii—Si1—F1xi | 89.94 (9) | O1xx—C4—H4A | 68.1 |
| F1ix—Si1—F1xi | 131.84 (4) | O1xxi—C4—H4A | 70.4 |
| F1i—Si1—F1xi | 48.16 (4) | O1vii—C4—H4A | 112.9 |
| F1x—Si1—F1xi | 180.00 (19) | O1—C4—H4A | 109.5 |
| F1ii—Si1—F1 | 131.84 (4) | O1xiv—C4—H4B | 154.5 |
| F1iii—Si1—F1 | 48.16 (4) | O1x—C4—H4B | 3.1 |
| F1iv—Si1—F1 | 180.0 | O1ix—C4—H4B | 55.4 |
| F1v—Si1—F1 | 131.83 (4) | O1xvii—C4—H4B | 148.9 |
| F1vi—Si1—F1 | 48.17 (4) | O1xviii—C4—H4B | 48.1 |
| F1vii—Si1—F1 | 89.94 (9) | O1iii—C4—H4B | 139.8 |
| F1viii—Si1—F1 | 90.06 (9) | O1vi—C4—H4B | 56.8 |
| F1ix—Si1—F1 | 109.39 (12) | O1xix—C4—H4B | 99.4 |
| F1i—Si1—F1 | 70.61 (12) | O1xx—C4—H4B | 51.6 |
| F1x—Si1—F1 | 89.95 (9) | O1xxi—C4—H4B | 94.1 |
| F1xi—Si1—F1 | 90.05 (9) | O1vii—C4—H4B | 108.2 |
| F2xii—Si2—F2xiii | 89.25 (7) | O1—C4—H4B | 109.5 |
| F2xii—Si2—F2xiv | 89.99 (6) | H4A—C4—H4B | 109.5 |
| F2xiii—Si2—F2xiv | 90.77 (8) | O1xiv—C4—H4C | 95.1 |
| F2xii—Si2—F2xv | 90.77 (8) | O1x—C4—H4C | 108.7 |
| F2xiii—Si2—F2xv | 89.99 (6) | O1ix—C4—H4C | 55.7 |
| F2xiv—Si2—F2xv | 178.93 (8) | O1xvii—C4—H4C | 48.5 |
| F2xii—Si2—F2xvi | 89.99 (6) | O1xviii—C4—H4C | 98.1 |
| F2xiii—Si2—F2xvi | 178.93 (8) | O1iii—C4—H4C | 56.6 |
| F2xiv—Si2—F2xvi | 89.99 (6) | O1vi—C4—H4C | 140.2 |
| F2xv—Si2—F2xvi | 89.25 (7) | O1xix—C4—H4C | 150.0 |
| F2xii—Si2—F2 | 178.93 (8) | O1xx—C4—H4C | 153.2 |
| F2xiii—Si2—F2 | 89.99 (6) | O1xxi—C4—H4C | 50.5 |
| F2xiv—Si2—F2 | 89.25 (7) | O1vii—C4—H4C | 3.4 |
| F2xv—Si2—F2 | 89.99 (6) | O1—C4—H4C | 109.5 |
| F2xvi—Si2—F2 | 90.77 (8) | H4A—C4—H4C | 109.5 |
| O1xiv—C4—O1x | 154 (10) | H4B—C4—H4C | 109.5 |
| O1xiv—C4—O1ix | 150 (10) | C4—O1—H1A | 114.9 |
| C2—N1—C1—N1i | −0.3 (3) | C1—N1—C2—C2i | 0.18 (16) |
| C3—N1—C1—N1i | −179.32 (13) | C3—N1—C2—C2i | 179.20 (14) |
| H··· | ||||
| O1—H1 | 0.85 | 1.96 (1) | 2.80 (3) | 177 (13) |
| C1—H1···F1 | 0.94 (3) | 2.24 (3) | 3.044 (3) | 143 (2) |
| C2—H2···F2xxii | 0.92 (2) | 2.21 (2) | 3.095 (2) | 160.3 (17) |
| H··· | ||||
| O1—H1A···F1 | 0.85 | 1.955 (2) | 2.80 (3) | 177 (13) |
| C1—H1···F1 | 0.94 (3) | 2.24 (3) | 3.044 (3) | 143 (2) |
| C2—H2···F2xxii | 0.92 (2) | 2.21 (2) | 3.095 (2) | 160 (2) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1 | 0.85 | 1.96 (1) | 2.80 (3) | 177 (13) |
| C1—H1⋯F1 | 0.94 (3) | 2.24 (3) | 3.044 (3) | 143 (2) |
| C2—H2⋯F2i | 0.92 (2) | 2.21 (2) | 3.095 (2) | 160.3 (17) |
Symmetry code: (i) .