| Literature DB >> 24109278 |
Akio Mishima1, Nagisa Katsuta, Midori Furusyou, Akira Fuyuhiro, Satoshi Kawata.
Abstract
The title dinuclear complex mol-ecule, [Cu2(C13H9N4)2(PF6)2], lies about an inversion center. The Cu(II) atom shows a square-pyramidal coordination geometry with the basal plane formed by four N atoms of the two bis-chelating 3,5-bis-(pyridin-2-yl)pyrazolate ions and with one F atom of the hexa-fluoro-phosphate ion in the apical position. Mol-ecules are stacked in a column along the a axis through C-H⋯F hydrogen bonds. The columns are further linked by other C-H⋯F hydrogen bonds, forming a three-dimensional network.Entities:
Year: 2013 PMID: 24109278 PMCID: PMC3793691 DOI: 10.1107/S1600536813018813
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cu2(C13H9N4)2(F6P)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 17353 reflections |
| θ = 3.2–27.5° | |
| µ = 1.67 mm−1 | |
| β = 95.753 (2)° | Block, purple |
| 0.50 × 0.15 × 0.10 mm | |
| Rigaku R-AXIS RAPID diffractometer | 3035 reflections with |
| Detector resolution: 10.000 pixels mm-1 | |
| ¥w scans | θmax = 27.5° |
| Absorption correction: multi-scan ( | |
| 23498 measured reflections | |
| 3364 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3364 reflections | (Δ/σ)max = 0.005 |
| 226 parameters | Δρmax = 0.44 e Å−3 |
| 0 restraints | Δρmin = −0.19 e Å−3 |
| Primary atom site location: structure-invariant direct methods |
| Refinement. Refinement was performed using all reflections. The weighted R-factor (wR) and goodness of fit (S) are based on F2. R-factor (gt) are based on F. The threshold expression of F2 > 2.0 sigma(F2) is used only for calculating R-factor (gt). |
| Cu1 | 0.24888 (3) | 1.033789 (9) | 0.417882 (19) | 0.02189 (8) | |
| P1 | 0.03196 (7) | 1.13684 (2) | 0.14887 (5) | 0.02699 (12) | |
| F1 | 0.0266 (2) | 1.09594 (7) | 0.27373 (13) | 0.0462 (4) | |
| F2 | 0.28337 (18) | 1.14060 (7) | 0.17046 (13) | 0.0442 (4) | |
| F3 | −0.22096 (18) | 1.13202 (6) | 0.13015 (12) | 0.0396 (3) | |
| F4 | 0.0145 (3) | 1.19979 (7) | 0.22615 (15) | 0.0542 (4) | |
| F5 | 0.0487 (3) | 1.07334 (7) | 0.07324 (15) | 0.0563 (4) | |
| F6 | 0.0329 (3) | 1.17709 (8) | 0.02601 (13) | 0.0538 (4) | |
| N1 | −0.4133 (3) | 0.88408 (7) | 0.53595 (15) | 0.0270 (4) | |
| N2 | −0.0897 (3) | 0.93626 (7) | 0.45127 (14) | 0.0253 (3) | |
| N3 | 0.0774 (3) | 0.95817 (7) | 0.39846 (15) | 0.0252 (3) | |
| N4 | 0.4018 (3) | 0.98801 (7) | 0.28636 (15) | 0.0267 (4) | |
| C1 | −0.5796 (4) | 0.85849 (11) | 0.5849 (2) | 0.0407 (5) | |
| C2 | −0.6626 (4) | 0.80010 (12) | 0.5503 (3) | 0.0457 (6) | |
| C3 | −0.5719 (4) | 0.76610 (11) | 0.4628 (3) | 0.0422 (5) | |
| C4 | −0.4009 (4) | 0.79120 (10) | 0.4109 (2) | 0.0361 (5) | |
| C5 | −0.3257 (3) | 0.85002 (9) | 0.44940 (18) | 0.0267 (4) | |
| C6 | −0.1453 (3) | 0.88030 (9) | 0.40028 (18) | 0.0270 (4) | |
| C7 | −0.0116 (3) | 0.86473 (9) | 0.31120 (19) | 0.0308 (4) | |
| C8 | 0.1266 (3) | 0.91584 (9) | 0.31413 (17) | 0.0267 (4) | |
| C9 | 0.3078 (3) | 0.93294 (9) | 0.24875 (17) | 0.0259 (4) | |
| C10 | 0.3792 (4) | 0.89636 (10) | 0.15631 (19) | 0.0345 (5) | |
| C11 | 0.5527 (4) | 0.91622 (11) | 0.1003 (2) | 0.0379 (5) | |
| C12 | 0.6503 (4) | 0.97141 (10) | 0.1374 (3) | 0.0394 (5) | |
| C13 | 0.5705 (4) | 1.00590 (10) | 0.2299 (3) | 0.0395 (5) | |
| H1 | −0.6429 | 0.8815 | 0.6461 | 0.0489* | |
| H2 | −0.7809 | 0.7839 | 0.5868 | 0.0549* | |
| H3 | −0.6258 | 0.7258 | 0.4381 | 0.0506* | |
| H4 | −0.3360 | 0.7685 | 0.3498 | 0.0433* | |
| H5 | −0.0140 | 0.8282 | 0.2608 | 0.0370* | |
| H6 | 0.3096 | 0.8581 | 0.1319 | 0.0413* | |
| H7 | 0.6039 | 0.8919 | 0.0366 | 0.0454* | |
| H8 | 0.7705 | 0.9858 | 0.1005 | 0.0473* | |
| H9 | 0.6386 | 1.0443 | 0.2547 | 0.0474* |
| Cu1 | 0.02108 (12) | 0.02079 (12) | 0.02492 (13) | −0.00163 (8) | 0.00777 (8) | 0.00105 (8) |
| P1 | 0.0235 (3) | 0.0286 (3) | 0.0298 (3) | 0.00159 (18) | 0.00704 (18) | 0.00549 (18) |
| F1 | 0.0339 (7) | 0.0609 (9) | 0.0441 (8) | 0.0039 (6) | 0.0048 (6) | 0.0282 (7) |
| F2 | 0.0238 (6) | 0.0595 (9) | 0.0501 (8) | −0.0005 (6) | 0.0075 (5) | 0.0071 (7) |
| F3 | 0.0243 (6) | 0.0452 (7) | 0.0494 (8) | 0.0015 (5) | 0.0050 (5) | 0.0164 (6) |
| F4 | 0.0554 (9) | 0.0404 (8) | 0.0704 (10) | −0.0047 (7) | 0.0235 (8) | −0.0159 (7) |
| F5 | 0.0550 (9) | 0.0471 (8) | 0.0710 (11) | −0.0066 (7) | 0.0268 (8) | −0.0213 (8) |
| F6 | 0.0451 (8) | 0.0709 (10) | 0.0458 (8) | −0.0083 (7) | 0.0071 (6) | 0.0299 (7) |
| N1 | 0.0240 (7) | 0.0287 (8) | 0.0289 (8) | −0.0056 (6) | 0.0053 (6) | 0.0000 (7) |
| N2 | 0.0256 (7) | 0.0233 (8) | 0.0282 (8) | −0.0040 (6) | 0.0094 (6) | −0.0015 (6) |
| N3 | 0.0246 (7) | 0.0246 (8) | 0.0279 (8) | −0.0027 (6) | 0.0099 (6) | −0.0008 (6) |
| N4 | 0.0275 (8) | 0.0237 (8) | 0.0307 (8) | 0.0021 (6) | 0.0118 (7) | 0.0025 (6) |
| C1 | 0.0360 (11) | 0.0469 (13) | 0.0420 (12) | −0.0155 (10) | 0.0168 (9) | −0.0086 (10) |
| C2 | 0.0388 (12) | 0.0486 (13) | 0.0521 (14) | −0.0233 (11) | 0.0162 (10) | −0.0052 (11) |
| C3 | 0.0375 (11) | 0.0326 (11) | 0.0567 (14) | −0.0141 (9) | 0.0057 (10) | −0.0042 (10) |
| C4 | 0.0332 (10) | 0.0275 (10) | 0.0486 (13) | −0.0046 (8) | 0.0086 (9) | −0.0067 (9) |
| C5 | 0.0220 (8) | 0.0260 (9) | 0.0324 (10) | −0.0017 (7) | 0.0036 (7) | 0.0014 (8) |
| C6 | 0.0256 (9) | 0.0232 (9) | 0.0330 (10) | −0.0025 (7) | 0.0069 (7) | −0.0016 (7) |
| C7 | 0.0279 (9) | 0.0277 (10) | 0.0381 (11) | −0.0038 (8) | 0.0095 (8) | −0.0078 (8) |
| C8 | 0.0250 (8) | 0.0271 (9) | 0.0288 (9) | −0.0005 (7) | 0.0073 (7) | −0.0040 (7) |
| C9 | 0.0229 (8) | 0.0291 (9) | 0.0265 (9) | 0.0016 (7) | 0.0061 (7) | 0.0015 (7) |
| C10 | 0.0322 (10) | 0.0392 (11) | 0.0333 (10) | −0.0023 (9) | 0.0100 (8) | −0.0092 (9) |
| C11 | 0.0368 (11) | 0.0457 (12) | 0.0335 (11) | 0.0041 (10) | 0.0155 (9) | −0.0042 (9) |
| C12 | 0.0369 (11) | 0.0407 (12) | 0.0449 (13) | −0.0004 (9) | 0.0247 (10) | 0.0031 (9) |
| C13 | 0.0407 (12) | 0.0303 (10) | 0.0517 (13) | −0.0069 (9) | 0.0257 (10) | −0.0022 (9) |
| Cu1—F1 | 2.4027 (14) | C3—C4 | 1.382 (4) |
| Cu1—N1i | 2.0698 (15) | C4—C5 | 1.388 (3) |
| Cu1—N2i | 1.9393 (16) | C5—C6 | 1.463 (3) |
| Cu1—N3 | 1.9405 (15) | C6—C7 | 1.394 (3) |
| Cu1—N4 | 2.0577 (17) | C7—C8 | 1.395 (3) |
| P1—F1 | 1.6205 (16) | C8—C9 | 1.460 (3) |
| P1—F2 | 1.5937 (13) | C9—C10 | 1.386 (3) |
| P1—F3 | 1.6033 (13) | C10—C11 | 1.380 (4) |
| P1—F4 | 1.5911 (17) | C11—C12 | 1.368 (4) |
| P1—F5 | 1.5908 (16) | C12—C13 | 1.384 (4) |
| P1—F6 | 1.5919 (16) | C1—H1 | 0.950 |
| N1—C1 | 1.346 (3) | C2—H2 | 0.950 |
| N1—C5 | 1.354 (3) | C3—H3 | 0.950 |
| N2—N3 | 1.342 (3) | C4—H4 | 0.950 |
| N2—C6 | 1.345 (3) | C7—H5 | 0.950 |
| N3—C8 | 1.346 (3) | C10—H6 | 0.950 |
| N4—C9 | 1.358 (3) | C11—H7 | 0.950 |
| N4—C13 | 1.345 (3) | C12—H8 | 0.950 |
| C1—C2 | 1.385 (4) | C13—H9 | 0.950 |
| C2—C3 | 1.371 (4) | ||
| F1—Cu1—N1i | 86.91 (6) | C1—C2—C3 | 119.1 (3) |
| F1—Cu1—N2i | 89.26 (6) | C2—C3—C4 | 119.1 (3) |
| F1—Cu1—N3 | 95.51 (6) | C3—C4—C5 | 119.0 (2) |
| F1—Cu1—N4 | 95.15 (6) | N1—C5—C4 | 122.62 (18) |
| N1i—Cu1—N2i | 80.32 (7) | N1—C5—C6 | 114.45 (17) |
| N1i—Cu1—N3 | 171.30 (7) | C4—C5—C6 | 122.94 (19) |
| N1i—Cu1—N4 | 107.82 (7) | N2—C6—C5 | 114.80 (18) |
| N2i—Cu1—N3 | 91.34 (7) | N2—C6—C7 | 110.23 (17) |
| N2i—Cu1—N4 | 170.90 (7) | C5—C6—C7 | 134.97 (18) |
| N3—Cu1—N4 | 80.32 (7) | C6—C7—C8 | 103.05 (17) |
| F1—P1—F2 | 90.45 (8) | N3—C8—C7 | 110.27 (17) |
| F1—P1—F3 | 88.14 (7) | N3—C8—C9 | 114.66 (17) |
| F1—P1—F4 | 89.73 (9) | C7—C8—C9 | 135.07 (19) |
| F1—P1—F5 | 89.48 (8) | N4—C9—C8 | 114.25 (17) |
| F1—P1—F6 | 179.00 (8) | N4—C9—C10 | 122.46 (18) |
| F2—P1—F3 | 178.59 (8) | C8—C9—C10 | 123.29 (18) |
| F2—P1—F4 | 90.10 (8) | C9—C10—C11 | 119.1 (2) |
| F2—P1—F5 | 90.07 (8) | C10—C11—C12 | 119.2 (3) |
| F2—P1—F6 | 90.55 (8) | C11—C12—C13 | 118.8 (3) |
| F3—P1—F4 | 89.93 (8) | N4—C13—C12 | 123.6 (2) |
| F3—P1—F5 | 89.88 (8) | N1—C1—H1 | 118.447 |
| F3—P1—F6 | 90.86 (8) | C2—C1—H1 | 118.447 |
| F4—P1—F5 | 179.19 (9) | C1—C2—H2 | 120.455 |
| F4—P1—F6 | 90.15 (9) | C3—C2—H2 | 120.458 |
| F5—P1—F6 | 90.64 (9) | C2—C3—H3 | 120.463 |
| Cu1—F1—P1 | 141.77 (8) | C4—C3—H3 | 120.456 |
| Cu1i—N1—C1 | 129.86 (15) | C3—C4—H4 | 120.518 |
| Cu1i—N1—C5 | 112.79 (13) | C5—C4—H4 | 120.513 |
| C1—N1—C5 | 117.14 (17) | C6—C7—H5 | 128.470 |
| Cu1i—N2—N3 | 134.19 (12) | C8—C7—H5 | 128.475 |
| Cu1i—N2—C6 | 117.43 (13) | C9—C10—H6 | 120.440 |
| N3—N2—C6 | 108.34 (16) | C11—C10—H6 | 120.440 |
| Cu1—N3—N2 | 134.43 (13) | C10—C11—H7 | 120.375 |
| Cu1—N3—C8 | 117.46 (13) | C12—C11—H7 | 120.382 |
| N2—N3—C8 | 108.11 (15) | C11—C12—H8 | 120.612 |
| Cu1—N4—C9 | 113.20 (13) | C13—C12—H8 | 120.598 |
| Cu1—N4—C13 | 129.88 (14) | N4—C13—H9 | 118.220 |
| C9—N4—C13 | 116.83 (17) | C12—C13—H9 | 118.227 |
| N1—C1—C2 | 123.1 (3) | ||
| F1—Cu1—N1i—C1i | −88.93 (13) | Cu1i—N2—N3—C8 | 177.44 (11) |
| F1—Cu1—N1i—C5i | 85.58 (10) | Cu1i—N2—C6—C5 | 1.66 (19) |
| N1i—Cu1—F1—P1 | 65.41 (14) | Cu1i—N2—C6—C7 | −177.98 (9) |
| F1—Cu1—N2i—N3i | 93.39 (14) | N3—N2—C6—C5 | 179.56 (13) |
| F1—Cu1—N2i—C6i | −83.83 (10) | N3—N2—C6—C7 | −0.08 (19) |
| N2i—Cu1—F1—P1 | 145.75 (14) | C6—N2—N3—Cu1 | 179.64 (14) |
| F1—Cu1—N3—N2 | −87.27 (14) | C6—N2—N3—C8 | 0.04 (18) |
| F1—Cu1—N3—C8 | 92.31 (11) | Cu1—N3—C8—C7 | −179.67 (9) |
| N3—Cu1—F1—P1 | −122.97 (14) | Cu1—N3—C8—C9 | 0.68 (19) |
| F1—Cu1—N4—C9 | −91.72 (10) | N2—N3—C8—C7 | 0.02 (19) |
| F1—Cu1—N4—C13 | 84.74 (13) | N2—N3—C8—C9 | −179.64 (13) |
| N4—Cu1—F1—P1 | −42.23 (14) | Cu1—N4—C9—C8 | −3.48 (18) |
| N1i—Cu1—N2i—N3i | −179.62 (15) | Cu1—N4—C9—C10 | 176.67 (11) |
| N1i—Cu1—N2i—C6i | 3.16 (10) | Cu1—N4—C13—C12 | −176.39 (12) |
| N2i—Cu1—N1i—C1i | −178.70 (14) | C9—N4—C13—C12 | −0.0 (3) |
| N2i—Cu1—N1i—C5i | −4.20 (10) | C13—N4—C9—C8 | 179.56 (15) |
| N1i—Cu1—N4—C9 | 179.88 (9) | C13—N4—C9—C10 | −0.3 (3) |
| N1i—Cu1—N4—C13 | −3.67 (14) | N1—C1—C2—C3 | 0.4 (4) |
| N4—Cu1—N1i—C1i | 5.49 (14) | C1—C2—C3—C4 | −0.4 (4) |
| N4—Cu1—N1i—C5i | 180.00 (9) | C2—C3—C4—C5 | 0.3 (3) |
| N2i—Cu1—N3—N2 | 2.12 (15) | C3—C4—C5—N1 | −0.1 (3) |
| N2i—Cu1—N3—C8 | −178.30 (11) | C3—C4—C5—C6 | 179.75 (17) |
| N3—Cu1—N2i—N3i | −2.11 (14) | N1—C5—C6—N2 | 2.1 (3) |
| N3—Cu1—N2i—C6i | −179.33 (11) | N1—C5—C6—C7 | −178.41 (17) |
| N3—Cu1—N4—C9 | 3.01 (10) | C4—C5—C6—N2 | −177.79 (17) |
| N3—Cu1—N4—C13 | 179.47 (14) | C4—C5—C6—C7 | 1.7 (4) |
| N4—Cu1—N3—N2 | 178.43 (15) | N2—C6—C7—C8 | 0.1 (2) |
| N4—Cu1—N3—C8 | −1.99 (10) | C5—C6—C7—C8 | −179.44 (19) |
| F2—P1—F1—Cu1 | −17.33 (14) | C6—C7—C8—N3 | −0.1 (2) |
| F3—P1—F1—Cu1 | 162.63 (13) | C6—C7—C8—C9 | 179.50 (18) |
| F4—P1—F1—Cu1 | −107.43 (14) | N3—C8—C9—N4 | 2.0 (3) |
| F5—P1—F1—Cu1 | 72.73 (14) | N3—C8—C9—C10 | −178.19 (14) |
| Cu1i—N1—C1—C2 | −174.59 (12) | C7—C8—C9—N4 | −177.58 (19) |
| Cu1i—N1—C5—C4 | 175.38 (11) | C7—C8—C9—C10 | 2.3 (4) |
| Cu1i—N1—C5—C6 | −4.49 (18) | N4—C9—C10—C11 | 0.2 (3) |
| C1—N1—C5—C4 | 0.1 (3) | C8—C9—C10—C11 | −179.59 (15) |
| C1—N1—C5—C6 | −179.75 (15) | C9—C10—C11—C12 | 0.1 (3) |
| C5—N1—C1—C2 | −0.3 (3) | C10—C11—C12—C13 | −0.4 (3) |
| Cu1i—N2—N3—Cu1 | −3.0 (3) | C11—C12—C13—N4 | 0.4 (4) |
| H··· | ||||
| C3—H3···F3ii | 0.95 | 2.31 | 3.257 (3) | 175 |
| C11—H7···F2iii | 0.95 | 2.54 | 3.451 (3) | 162 |
| C12—H8···F5iv | 0.95 | 2.60 | 3.456 (3) | 150 |
| C13—H9···F3iv | 0.95 | 2.52 | 3.226 (3) | 131 |
Selected bond lengths (Å)
| Cu1—F1 | 2.4027 (14) |
| Cu1—N1i | 2.0698 (15) |
| Cu1—N2i | 1.9393 (16) |
| Cu1—N3 | 1.9405 (15) |
| Cu1—N4 | 2.0577 (17) |
Symmetry code: (i) .
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C3—H3⋯F3ii | 0.95 | 2.31 | 3.257 (3) | 175 |
| C11—H7⋯F2iii | 0.95 | 2.54 | 3.451 (3) | 162 |
| C12—H8⋯F5iv | 0.95 | 2.60 | 3.456 (3) | 150 |
| C13—H9⋯F3iv | 0.95 | 2.52 | 3.226 (3) | 131 |
Symmetry codes: (ii) ; (iii) ; (iv) .