Literature DB >> 22219771

Bis[μ-3,5-bis-(2-pyrid-yl)pyrazolato]bis-(hydrogensulfato)-dicopper(II) methanol disolvate.

Akio Mishima, Akira Fuyuhiro, Hitoshi Kumagai, Satoshi Kawata.   

Abstract

The title compound, [Cu(2)(C(13)n class="Species">H(9)N(4))(2)(HSO(4))(2)]·2CH(3)OH, consists of discrete centrosymmetric dinuclear complex mol-ecules and methanol solvent mol-ecules. The Cu(II) atom shows a square-pyramidal coordination geometry and is bonded to four N atoms of the two bis-chelating 3,5-bis-(2-pyrid-yl)pyrazol-ate ions (bpypz(-)) and one O atom of the hydrogensulfate ion. The bpypz(-) ligands in the complex mol-ecule are virtually coplanar [dihedral angle between the mean ligand planes = 0.000(1)°] with the Cu(II) atom deviating in opposite directions from their best plane by 0.2080 (12) Å. π-π stacking inter-actions between the pyridyl and pyrazole rings [centroid-centroid distance = 3.391 (3) Å] and strong O-H⋯O hydrogen bonds between the hydrogensulfate ligands and the methanol mol-ecules assemble the mol-ecules into a one-dimensional polymeric structure extending along the a axis. The methanol mol-ecule acts both as an accepter and a donor in the hydrogen bonding.

Entities:  

Year:  2011        PMID: 22219771      PMCID: PMC3246951          DOI: 10.1107/S1600536811038700

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For metal complexes of 3,5-bis­(2-pyrid­yl)n class="Chemical">pyrazole, see: Munakata et al. (1995 ▶); Nakano et al. (2004 ▶); Du et al. (2005 ▶); Yoneda, Adachi, Hayami et al. (2006 ▶); Yoneda, Adachi, Nishio et al. (2006 ▶); Ishikawa et al. (2008 ▶, 2010 ▶). For an example of a coordinated hydrogensulfate ion, see: Dragancea et al. (2008 ▶).

Experimental

Crystal data

[Cu2(C13H9N4)2(HO4S)2]·n class="Chemical">2CH4O M = 827.82 Monoclinic, a = 6.0909 (3) Å b = 16.0581 (6) Å c = 15.6579 (7) Å β = 95.2044 (14)° V = 1525.16 (12) Å3 Z = 2 Mo Kα radiation μ = 1.61 mm−1 T = 200 K 0.35 × 0.04 × 0.03 mm

Data collection

Rigaku R-AXIS RAPID diffractometer Absorption correction: multi-scan (ABSCOR; Rigaku, 1995 ▶) T min = 0.926, T max = 0.953 16136 measured reflections 2470 independent reflections 3262 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.024 wR(F 2) = 0.068 S = 1.08 3470 reflections 227 parameters H-atom parameters constrained Δρmax = 0.39 e Å−3 Δρmin = −0.51 e Å−3 Data collection: RAPID-AUTO (Rigaku, 2002 ▶); cell refinement: RAPID-AUTO; data reduction: RAPID-AUTO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: CrystalStructure (Rigaku, 2010 ▶); software used to prepare material for publication: CrystalStructure. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811038700/gk2397sup1.cif Supplementary material file. DOI: 10.1107/S1600536811038700/gk2397Isup2.cdx Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811038700/gk2397Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu2(C13H9N4)2(HO4S)2]·2CH4OF(000) = 844.00
Mr = 827.82Dx = 1.803 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71075 Å
Hall symbol: -P 2ybcCell parameters from 14158 reflections
a = 6.0909 (3) Åθ = 3.4–27.5°
b = 16.0581 (6) ŵ = 1.61 mm1
c = 15.6579 (7) ÅT = 200 K
β = 95.2044 (14)°Column, green
V = 1525.16 (12) Å30.35 × 0.04 × 0.03 mm
Z = 2
Rigaku R-AXIS RAPID diffractometer3262 reflections with F2 > 2.0σ(F2)
Detector resolution: 10.000 pixels mm-1Rint = 0.021
ω scansθmax = 27.4°
Absorption correction: multi-scan (ABSCOR; Rigaku, 1995)h = −7→7
Tmin = 0.926, Tmax = 0.953k = −20→20
16136 measured reflectionsl = −20→20
2470 independent reflections
Refinement on F2Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.024Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.068H-atom parameters constrained
S = 1.08w = 1/[σ2(Fo2) + (0.0383P)2 + 0.881P] where P = (Fo2 + 2Fc2)/3
3470 reflections(Δ/σ)max = 0.001
227 parametersΔρmax = 0.39 e Å3
0 restraintsΔρmin = −0.51 e Å3
Primary atom site location: structure-invariant direct methods
Geometry. ENTER SPECIAL DETAILS OF THE MOLECULAR GEOMETRY
Refinement. Refinement was performed using all reflections. The weighted R-factor(wR) and goodness of fit (S) are based on F2. R-factor (gt) are based on F. The threshold expression of F2 > 2.0 σ(F2) is used only for calculating R-factor (gt).
xyzUiso*/Ueq
Cu10.28031 (3)0.520598 (11)0.578370 (12)0.01532 (7)
S10.20037 (6)0.55399 (2)0.78731 (2)0.01893 (10)
O10.1195 (2)0.56027 (8)0.69710 (8)0.0266 (3)
O20.4401 (2)0.58901 (8)0.78864 (8)0.0293 (3)
O30.2141 (3)0.46998 (8)0.81989 (9)0.0292 (3)
O40.0797 (3)0.60921 (9)0.84007 (9)0.0356 (4)
O50.7222 (2)0.55846 (10)0.91528 (9)0.0331 (3)
N10.4667 (3)0.42870 (8)0.64544 (9)0.0172 (3)
N20.0927 (2)0.42369 (8)0.55066 (9)0.0175 (3)
N3−0.1001 (2)0.41178 (8)0.50440 (9)0.0172 (3)
N4−0.4729 (3)0.37148 (8)0.42106 (9)0.0180 (3)
C10.6627 (3)0.43350 (10)0.69186 (11)0.0222 (4)
C20.7564 (3)0.36790 (11)0.73994 (11)0.0243 (4)
C30.6436 (3)0.29342 (11)0.74028 (11)0.0249 (4)
C40.4411 (3)0.28646 (10)0.69234 (11)0.0221 (4)
C50.3577 (3)0.35468 (10)0.64594 (10)0.0168 (3)
C60.1491 (3)0.35246 (9)0.59261 (10)0.0170 (3)
C7−0.0117 (3)0.29197 (9)0.57300 (10)0.0186 (3)
C8−0.1656 (3)0.33282 (9)0.51668 (10)0.0167 (3)
C9−0.3750 (3)0.30969 (9)0.47033 (10)0.0169 (3)
C10−0.4679 (3)0.23107 (10)0.47581 (11)0.0226 (4)
C11−0.6675 (3)0.21423 (11)0.42906 (12)0.0262 (4)
C12−0.7683 (3)0.27685 (11)0.37925 (12)0.0256 (4)
C13−0.6672 (3)0.35401 (11)0.37704 (11)0.0232 (4)
C140.7361 (4)0.47382 (13)0.94479 (15)0.0361 (5)
H10.74150.48460.69180.0267*
H20.89550.37410.77200.0292*
H30.70360.24750.77290.0299*
H40.36100.23570.69140.0266*
H5−0.01540.23630.59320.0223*
H6−0.39570.18940.51110.0272*
H7−0.73340.16080.43130.0314*
H8−0.90540.26710.34690.0308*
H9−0.73860.39660.34280.0278*
H100.53060.57330.83440.0351*
H110.85290.56970.88730.0397*
H120.86580.44710.92400.0434*
H130.60290.44360.92290.0434*
H140.74890.47301.00760.0434*
U11U22U33U12U13U23
Cu10.01457 (11)0.01325 (11)0.01755 (11)−0.00117 (6)−0.00178 (7)0.00169 (6)
S10.02020 (19)0.01756 (19)0.01917 (19)−0.00183 (14)0.00250 (15)−0.00195 (14)
O10.0213 (6)0.0362 (7)0.0219 (6)0.0049 (6)−0.0005 (5)−0.0002 (5)
O20.0235 (6)0.0335 (7)0.0299 (7)−0.0093 (6)−0.0023 (5)0.0060 (6)
O30.0320 (7)0.0207 (6)0.0344 (8)−0.0032 (5)0.0007 (6)0.0053 (5)
O40.0447 (8)0.0269 (7)0.0380 (8)−0.0005 (6)0.0189 (7)−0.0097 (6)
O50.0244 (7)0.0382 (8)0.0362 (8)−0.0030 (6)−0.0003 (6)0.0022 (6)
N10.0175 (6)0.0153 (6)0.0187 (7)0.0016 (5)0.0003 (5)−0.0006 (5)
N20.0169 (6)0.0155 (6)0.0195 (7)−0.0008 (5)−0.0028 (5)0.0018 (5)
N30.0171 (6)0.0146 (6)0.0191 (7)−0.0022 (5)−0.0022 (5)0.0017 (5)
N40.0166 (6)0.0173 (6)0.0202 (7)−0.0014 (5)0.0014 (5)0.0007 (5)
C10.0189 (8)0.0202 (8)0.0269 (9)0.0003 (6)−0.0019 (7)−0.0028 (7)
C20.0204 (8)0.0268 (9)0.0244 (9)0.0040 (7)−0.0052 (7)−0.0028 (7)
C30.0255 (9)0.0247 (9)0.0233 (9)0.0054 (7)−0.0043 (7)0.0042 (7)
C40.0236 (8)0.0190 (8)0.0232 (8)0.0006 (7)−0.0016 (7)0.0035 (6)
C50.0182 (7)0.0164 (7)0.0161 (7)0.0013 (6)0.0022 (6)−0.0003 (6)
C60.0182 (7)0.0154 (7)0.0174 (7)0.0015 (6)0.0012 (6)0.0021 (6)
C70.0205 (8)0.0149 (7)0.0203 (8)−0.0004 (6)0.0009 (6)0.0022 (6)
C80.0183 (7)0.0141 (7)0.0178 (7)−0.0015 (6)0.0026 (6)0.0006 (6)
C90.0175 (7)0.0160 (7)0.0173 (7)−0.0006 (6)0.0030 (6)−0.0011 (6)
C100.0238 (8)0.0172 (7)0.0267 (9)−0.0021 (7)0.0010 (7)0.0006 (6)
C110.0254 (9)0.0208 (8)0.0322 (10)−0.0082 (7)0.0020 (7)−0.0031 (7)
C120.0186 (8)0.0290 (9)0.0286 (9)−0.0070 (7)−0.0020 (7)−0.0023 (7)
C130.0185 (8)0.0248 (8)0.0254 (8)−0.0021 (7)−0.0027 (7)0.0026 (7)
C140.0367 (11)0.0384 (12)0.0331 (11)−0.0026 (9)0.0014 (8)0.0057 (9)
Cu1—O12.2696 (13)C6—C71.394 (2)
Cu1—N12.0865 (13)C7—C81.392 (2)
Cu1—N21.9558 (13)C8—C91.457 (2)
Cu1—N3i1.9507 (13)C9—C101.389 (3)
Cu1—N4i2.0924 (14)C10—C111.387 (3)
S1—O11.4566 (13)C11—C121.382 (3)
S1—O21.5630 (13)C12—C131.385 (3)
S1—O31.4420 (14)O2—H100.900
S1—O41.4557 (16)O5—H110.960
O5—C141.436 (3)C1—H10.950
N1—C11.342 (2)C2—H20.950
N1—C51.362 (2)C3—H30.950
N2—N31.3368 (18)C4—H40.950
N2—C61.348 (2)C7—H50.950
N3—C81.348 (2)C10—H60.950
N4—C91.361 (2)C11—H70.950
N4—C131.344 (2)C12—H80.950
C1—C21.387 (3)C13—H90.950
C2—C31.380 (3)C14—H120.980
C3—C41.389 (3)C14—H130.980
C4—C51.385 (3)C14—H140.980
C5—C61.457 (2)
O1—Cu1—N192.40 (5)N2—C6—C7109.97 (13)
O1—Cu1—N296.79 (6)C5—C6—C7134.63 (14)
O1—Cu1—N3i97.44 (6)C6—C7—C8103.33 (13)
O1—Cu1—N4i92.72 (5)N3—C8—C7110.04 (13)
N1—Cu1—N280.16 (6)N3—C8—C9115.19 (13)
N1—Cu1—N3i167.37 (6)C7—C8—C9134.77 (14)
N1—Cu1—N4i107.72 (6)N4—C9—C8114.53 (13)
N2—Cu1—N3i90.77 (6)N4—C9—C10122.53 (14)
N2—Cu1—N4i167.42 (6)C8—C9—C10122.94 (14)
N3i—Cu1—N4i79.82 (6)C9—C10—C11119.12 (15)
O1—S1—O2102.78 (7)C10—C11—C12118.63 (16)
O1—S1—O3114.30 (8)C11—C12—C13119.29 (16)
O1—S1—O4111.38 (8)N4—C13—C12123.13 (16)
O2—S1—O3107.92 (8)N1—C1—H1118.240
O2—S1—O4107.00 (8)C2—C1—H1118.243
O3—S1—O4112.66 (9)C1—C2—H2120.658
Cu1—O1—S1129.93 (8)C3—C2—H2120.663
Cu1—N1—C1130.43 (11)C2—C3—H3120.467
Cu1—N1—C5112.14 (10)C4—C3—H3120.467
C1—N1—C5117.20 (14)C3—C4—H4120.496
Cu1—N2—N3134.51 (11)C5—C4—H4120.484
Cu1—N2—C6116.71 (10)C6—C7—H5128.336
N3—N2—C6108.36 (13)C8—C7—H5128.337
Cu1i—N3—N2133.96 (11)C9—C10—H6120.442
Cu1i—N3—C8117.54 (10)C11—C10—H6120.440
N2—N3—C8108.31 (13)C10—C11—H7120.683
Cu1i—N4—C9112.64 (10)C12—C11—H7120.692
Cu1i—N4—C13129.97 (12)C11—C12—H8120.351
C9—N4—C13117.30 (14)C13—C12—H8120.364
N1—C1—C2123.52 (15)N4—C13—H9118.439
C1—C2—C3118.68 (16)C12—C13—H9118.430
C2—C3—C4119.07 (16)O5—C14—H12109.477
C3—C4—C5119.02 (15)O5—C14—H13109.477
N1—C5—C4122.52 (14)O5—C14—H14109.472
N1—C5—C6114.75 (14)H12—C14—H13109.472
C4—C5—C6122.73 (15)H12—C14—H14109.469
N2—C6—C5115.40 (13)H13—C14—H14109.460
O1—Cu1—N1—C1−85.61 (12)Cu1—N2—C6—C5−6.86 (18)
O1—Cu1—N1—C588.62 (9)Cu1—N2—C6—C7173.75 (9)
N1—Cu1—O1—S126.68 (10)N3—N2—C6—C5179.56 (12)
O1—Cu1—N2—N388.20 (13)N3—N2—C6—C70.17 (17)
O1—Cu1—N2—C6−83.23 (10)C6—N2—N3—Cu1i−174.97 (13)
N2—Cu1—O1—S1107.06 (10)C6—N2—N3—C8−0.31 (17)
O1—Cu1—N3i—N2i−87.66 (13)Cu1i—N3—C8—C7176.01 (9)
O1—Cu1—N3i—C8i86.62 (10)Cu1i—N3—C8—C9−4.37 (18)
N3i—Cu1—O1—S1−161.27 (10)N2—N3—C8—C70.34 (17)
O1—Cu1—N4i—C9i−92.61 (9)N2—N3—C8—C9179.96 (12)
O1—Cu1—N4i—C13i83.70 (12)Cu1i—N4—C9—C83.47 (16)
N4i—Cu1—O1—S1−81.19 (10)Cu1i—N4—C9—C10−176.54 (10)
N1—Cu1—N2—N3179.47 (14)Cu1i—N4—C13—C12175.54 (10)
N1—Cu1—N2—C68.03 (9)C9—N4—C13—C12−0.6 (3)
N2—Cu1—N1—C1177.90 (13)C13—N4—C9—C8−179.71 (13)
N2—Cu1—N1—C5−7.86 (9)C13—N4—C9—C100.3 (3)
N1—Cu1—N4i—C9i174.00 (8)N1—C1—C2—C30.2 (3)
N1—Cu1—N4i—C13i−9.69 (14)C1—C2—C3—C40.3 (3)
N4i—Cu1—N1—C18.01 (14)C2—C3—C4—C5−0.3 (3)
N4i—Cu1—N1—C5−177.75 (8)C3—C4—C5—N1−0.0 (3)
N2—Cu1—N3i—N2i9.29 (14)C3—C4—C5—C6178.73 (14)
N2—Cu1—N3i—C8i−176.42 (10)N1—C5—C6—N2−0.2 (2)
N3i—Cu1—N2—N3−9.38 (14)N1—C5—C6—C7178.96 (15)
N3i—Cu1—N2—C6179.19 (10)C4—C5—C6—N2−179.10 (14)
N3i—Cu1—N4i—C9i4.46 (9)C4—C5—C6—C70.1 (3)
N3i—Cu1—N4i—C13i−179.23 (13)N2—C6—C7—C80.03 (17)
N4i—Cu1—N3i—N2i−179.10 (14)C5—C6—C7—C8−179.20 (17)
N4i—Cu1—N3i—C8i−4.82 (9)C6—C7—C8—N3−0.22 (17)
O2—S1—O1—Cu147.83 (11)C6—C7—C8—C9−179.74 (16)
O3—S1—O1—Cu1−68.82 (12)N3—C8—C9—N40.3 (2)
O4—S1—O1—Cu1162.08 (10)N3—C8—C9—C10−179.68 (13)
Cu1—N1—C1—C2173.45 (10)C7—C8—C9—N4179.81 (17)
Cu1—N1—C5—C4−174.59 (10)C7—C8—C9—C10−0.2 (3)
Cu1—N1—C5—C66.54 (16)N4—C9—C10—C110.4 (3)
C1—N1—C5—C40.5 (3)C8—C9—C10—C11−179.63 (14)
C1—N1—C5—C6−178.39 (13)C9—C10—C11—C12−0.7 (3)
C5—N1—C1—C2−0.5 (3)C10—C11—C12—C130.4 (3)
Cu1—N2—N3—Cu1i13.1 (3)C11—C12—C13—N40.3 (3)
Cu1—N2—N3—C8−172.25 (11)
D—H···AD—HH···AD···AD—H···A
O2—H10···O50.901.662.5509 (18)170
O5—H11···O4ii0.961.742.694 (2)169
Table 1

Selected geometric parameters (Å, °)

Cu1—O12.2696 (13)
Cu1—N12.0865 (13)
Cu1—N21.9558 (13)
Cu1—N3i1.9507 (13)
Cu1—N4i2.0924 (14)

Symmetry code: (i) .

  5 in total

1.  Construction of a novel topological frustrated system: a frustrated metal cluster in a helical space.

Authors:  Ryuta Ishikawa; Motohiro Nakano; Akira Fuyuhiro; Tetsuya Takeuchi; Shojiro Kimura; Takanari Kashiwagi; Masayuki Hagiwara; Koichi Kindo; Sumio Kaizaki; Satoshi Kawata
Journal:  Chemistry       Date:  2010-09-24       Impact factor: 5.236

2.  A steep one-step [HS-HS] to [LS-LS] spin transition in a 4,4'-bipyridine linked one-dimensional coordination polymer constructed from a pyrazolato bridged Fe(II) dimer.

Authors:  Ko Yoneda; Keiichi Adachi; Shinya Hayami; Yonezo Maeda; Motomi Katada; Akira Fuyuhiro; Satoshi Kawata; Sumio Kaizaki
Journal:  Chem Commun (Camb)       Date:  2005-10-20       Impact factor: 6.222

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  An [Fe(II) (3)O](4+) core wrapped by two [Fe(II)L(3)](-) units.

Authors:  Ko Yoneda; Keiichi Adachi; Kyonosuke Nishio; Mikio Yamasaki; Akira Fuyuhiro; Motomi Katada; Sumio Kaizaki; Satoshi Kawata
Journal:  Angew Chem Int Ed Engl       Date:  2006-08-18       Impact factor: 15.336

5.  Magnetic behavior and Mossbauer spectra of spin-crossover pyrazolate bridged dinuclear diiron(II) complexes: X-ray structures of high-spin and low-spin [(Fe(NCBH3)(py))2(mu-bpypz)2].

Authors:  Keisaku Nakano; Naohiko Suemura; Satoshi Kawata; Akira Fuyuhiro; Takashi Yagi; Saburo Nasu; Syotaro Morimoto; Sumio Kaizaki
Journal:  Dalton Trans       Date:  2004-02-27       Impact factor: 4.390

  5 in total
  3 in total

1.  Bis[μ-3,5-bis-(pyridin-2-yl)-1H-pyrazole]-bis-[di-bromido-iron(III)].

Authors:  Nagisa Katsuta; Akio Mishima; Akira Fuyuhiro; Shinya Hayami; Satoshi Kawata
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-10-02

2.  Bis[μ-3,5-bis-(pyridin-2-yl)pyrazolato]bis-[(hexa-fluoro-phosphato)copper(II)].

Authors:  Akio Mishima; Nagisa Katsuta; Midori Furusyou; Akira Fuyuhiro; Satoshi Kawata
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-07-13

3.  A Computational Study of Metallacycles Formed by Pyrazolate Ligands and the Coinage Metals M = Cu(I), Ag(I) and Au(I): (pzM)n for n = 2, 3, 4, 5 and 6. Comparison with Structures Reported in the Cambridge Crystallographic Data Center (CCDC).

Authors:  José Elguero; Ibon Alkorta
Journal:  Molecules       Date:  2020-11-03       Impact factor: 4.411

  3 in total

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