Literature DB >> 24098229

Amino-[(1H-benzimidazol-2-yl)amino]-methaniminium 4-methyl-benzene-sulfonate.

Shaaban K Mohamed1, Mehmet Akkurt, Mahmoud A A Elremaily, Ali M Ali, Mustafa R Albayati.   

Abstract

The asymmetric unit of the title salt, C8H10N5 (+)·C7H7O3S(-), consists of two amino-[(1H-benzimidazol-2-yl)amino]-meth-an-im-inium cations and two 4-methyl-benzene-sulfonate anions. The cations are each stabilized by intra-molecular N-H⋯N hydrogen bonds between the free amino groups and the imine N atoms of the benzimidazole units, forming S(6) ring motifs. In the crystal, cations and anions are linked by N-H⋯O and C-H⋯O hydrogen bonds, forming a three-dimensional supra-molecular framework. Two strong π-π stacking inter-actions [centroid-centroid distances = 3.4112 (14) and 3.4104 (14) Å] also occur between the centroids of the imidazole rings of like cations.

Entities:  

Year:  2013        PMID: 24098229      PMCID: PMC3790410          DOI: 10.1107/S1600536813024975

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of guanidine-containing compounds, see: Wu et al. (2002 ▶); Hopkins et al. (2002 ▶); Kilburn et al. (2002 ▶); Manimala & Anslyn (2002 ▶). For pharmaceutical and chemical applications of guanidines, see: Han et al. (2008 ▶); Hannon & Anslyn (1993 ▶); Ekelund et al. (2001 ▶); Kovacevic & Maksic (2001 ▶); Costa et al. (1998 ▶). For graph-set motifs, see: Bernstein et al. (1995 ▶) and for standard bond lengths, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C8H10N5 +·C7H7O3S M = 347.41 Monoclinic, a = 12.3821 (4) Å b = 17.8077 (7) Å c = 14.5112 (5) Å β = 90.013 (2)° V = 3199.7 (2) Å3 Z = 8 Mo Kα radiation μ = 0.23 mm−1 T = 100 K 0.35 × 0.10 × 0.04 mm

Data collection

Bruker APEXII CCD diffractometer 20618 measured reflections 5679 independent reflections 4108 reflections with I > 2σ(I) R int = 0.044

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.109 S = 1.05 5679 reflections 469 parameters 15 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.33 e Å−3 Δρmin = −0.38 e Å−3 Data collection: APEX2 (Bruker, 2013 ▶); cell refinement: SAINT (Bruker, 2013 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶) and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813024975/sj5349sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813024975/sj5349Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813024975/sj5349Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H10N5+·C7H7O3SF(000) = 1456
Mr = 347.41Dx = 1.442 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 9624 reflections
a = 12.3821 (4) Åθ = 2.5–25.1°
b = 17.8077 (7) ŵ = 0.23 mm1
c = 14.5112 (5) ÅT = 100 K
β = 90.013 (2)°Plate, colourless
V = 3199.7 (2) Å30.35 × 0.10 × 0.04 mm
Z = 8
Bruker APEXII CCD diffractometer4108 reflections with I > 2σ(I)
Radiation source: sealed tubeRint = 0.044
Graphite monochromatorθmax = 25.1°, θmin = 2.5°
φ and ω scansh = −14→14
20618 measured reflectionsk = −17→21
5679 independent reflectionsl = −17→17
Refinement on F215 restraints
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.044 W = 1/[Σ2(FO2) + (0.0495P)2 + 1.3622P] where P = (FO2 + 2FC2)/3
wR(F2) = 0.109(Δ/σ)max < 0.001
S = 1.05Δρmax = 0.33 e Å3
5679 reflectionsΔρmin = −0.38 e Å3
469 parameters
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
N1−0.06286 (16)0.53699 (11)0.14245 (14)0.0175 (6)
N20.09357 (15)0.48502 (11)0.09774 (13)0.0169 (6)
N3−0.03173 (16)0.40955 (11)0.18217 (14)0.0180 (6)
N40.12756 (17)0.34452 (13)0.15854 (15)0.0213 (7)
N5−0.01669 (17)0.28656 (13)0.22877 (15)0.0228 (7)
C8−0.00584 (19)0.59345 (14)0.09792 (15)0.0175 (8)
C9−0.0290 (2)0.66825 (15)0.08044 (17)0.0225 (8)
C100.0487 (2)0.70888 (15)0.03340 (18)0.0267 (9)
C110.1448 (2)0.67604 (14)0.00378 (18)0.0239 (8)
C120.1676 (2)0.60121 (14)0.02124 (16)0.0210 (8)
C130.09108 (19)0.56002 (14)0.06984 (16)0.0169 (7)
C140.00195 (18)0.47560 (13)0.14059 (16)0.0158 (7)
C150.02761 (19)0.34569 (14)0.18891 (16)0.0181 (8)
N60.56311 (16)0.46290 (12)1.14251 (14)0.0176 (7)
N70.40627 (15)0.51515 (11)1.09786 (13)0.0165 (6)
N80.53226 (16)0.59052 (11)1.18216 (14)0.0174 (6)
N90.37236 (17)0.65557 (12)1.15834 (15)0.0206 (7)
N100.51667 (17)0.71349 (13)1.22845 (15)0.0239 (7)
C230.50569 (19)0.40666 (14)1.09794 (16)0.0174 (7)
C240.5292 (2)0.33155 (14)1.08030 (18)0.0230 (8)
C250.4513 (2)0.29117 (15)1.03352 (18)0.0256 (8)
C260.3551 (2)0.32380 (14)1.00391 (18)0.0240 (8)
C270.33247 (19)0.39879 (14)1.02117 (16)0.0208 (8)
C280.40902 (19)0.43994 (14)1.06964 (16)0.0170 (7)
C290.49835 (18)0.52464 (14)1.14061 (15)0.0162 (8)
C300.47239 (19)0.65446 (14)1.18866 (16)0.0168 (8)
S10.21220 (5)0.14511 (3)0.19245 (4)0.0171 (2)
O10.25453 (12)0.08701 (10)0.25384 (11)0.0209 (5)
O20.09531 (12)0.14896 (9)0.19288 (11)0.0208 (5)
O30.26233 (12)0.21792 (9)0.21165 (11)0.0199 (5)
C10.25080 (18)0.12068 (13)0.07911 (17)0.0182 (8)
C20.1867 (2)0.14390 (16)0.00683 (19)0.0307 (9)
C30.2188 (2)0.13075 (18)−0.08296 (19)0.0363 (10)
C40.3145 (2)0.09439 (17)−0.10240 (19)0.0312 (9)
C50.3776 (2)0.07199 (19)−0.0290 (2)0.0385 (10)
C60.3467 (2)0.08403 (17)0.06154 (19)0.0321 (9)
C70.3494 (2)0.0806 (2)−0.2003 (2)0.0464 (13)
S20.71207 (5)0.14502 (3)0.80768 (4)0.0170 (2)
O40.59550 (13)0.14897 (10)0.80726 (11)0.0211 (5)
O50.76233 (12)0.21802 (9)0.78844 (11)0.0210 (5)
O60.75459 (13)0.08684 (10)0.74612 (11)0.0218 (5)
C160.8464 (2)0.08440 (17)0.93848 (19)0.0330 (9)
C170.8775 (2)0.07195 (19)1.0293 (2)0.0397 (10)
C180.8143 (2)0.09440 (17)1.10254 (18)0.0295 (9)
C190.7187 (2)0.13093 (18)1.08268 (19)0.0353 (10)
C200.6868 (2)0.14404 (16)0.99331 (19)0.0301 (9)
C210.75051 (19)0.12081 (14)0.92102 (16)0.0178 (8)
C220.8491 (2)0.0808 (2)1.2004 (2)0.0486 (13)
HN1−0.1196 (16)0.5434 (14)0.1755 (16)0.0210*
HN3−0.0980 (14)0.4078 (15)0.1986 (17)0.0220*
H4A0.148 (2)0.3840 (12)0.1274 (17)0.0260*
H4B0.1687 (18)0.3051 (12)0.1641 (18)0.0260*
H5A−0.0860 (14)0.2874 (16)0.2457 (18)0.0270*
H5B0.021 (2)0.2448 (12)0.2250 (19)0.0270*
H9−0.095000.690500.099800.0270*
H100.036200.760500.021000.0320*
H110.195800.70560−0.029100.0290*
H120.233000.578900.000800.0250*
HN60.6213 (15)0.4571 (15)1.1766 (16)0.0210*
HN80.5993 (14)0.5904 (15)1.2000 (16)0.0210*
H9A0.353 (2)0.6174 (12)1.1260 (16)0.0250*
H9B0.3349 (19)0.6944 (12)1.1706 (18)0.0250*
H10A0.478 (2)0.7546 (12)1.2263 (19)0.0290*
H10B0.5849 (14)0.7141 (16)1.2466 (18)0.0290*
H240.595300.309301.099400.0280*
H250.463800.239501.021100.0310*
H260.304100.294100.971300.0290*
H270.267100.421201.000600.0250*
H20.120400.169000.018700.0370*
H30.174100.14710−0.132200.0440*
H50.444300.04750−0.041000.0460*
H60.391000.067300.110900.0390*
H7A0.335600.12570−0.237300.0690*
H7B0.308600.03830−0.225800.0690*
H7C0.426800.06900−0.201600.0690*
H160.890800.068000.889100.0400*
H170.944100.047301.041200.0480*
H190.674000.147401.131900.0420*
H200.620600.169200.981500.0360*
H22A0.800900.043901.229000.0730*
H22B0.845800.128001.235000.0730*
H22C0.923300.061701.201000.0730*
U11U22U33U12U13U23
N10.0175 (11)0.0148 (11)0.0202 (11)0.0030 (9)0.0011 (8)−0.0053 (9)
N20.0175 (11)0.0146 (11)0.0187 (10)0.0009 (9)−0.0013 (8)−0.0022 (9)
N30.0129 (10)0.0180 (12)0.0232 (11)0.0025 (9)0.0019 (8)0.0001 (9)
N40.0207 (12)0.0157 (13)0.0275 (12)0.0043 (9)0.0027 (9)0.0042 (10)
N50.0198 (11)0.0176 (13)0.0311 (12)0.0049 (10)0.0052 (9)0.0061 (10)
C80.0206 (13)0.0171 (14)0.0149 (12)0.0004 (10)−0.0044 (9)−0.0027 (10)
C90.0251 (14)0.0175 (14)0.0249 (13)0.0049 (11)−0.0062 (11)−0.0048 (11)
C100.0340 (16)0.0160 (15)0.0300 (14)0.0006 (12)−0.0085 (12)0.0008 (12)
C110.0266 (14)0.0202 (14)0.0250 (13)−0.0053 (11)−0.0048 (11)0.0034 (12)
C120.0209 (13)0.0218 (15)0.0204 (13)−0.0014 (11)−0.0038 (10)−0.0014 (11)
C130.0204 (13)0.0124 (13)0.0178 (12)0.0007 (10)−0.0059 (10)−0.0037 (10)
C140.0170 (12)0.0141 (13)0.0162 (12)0.0004 (10)−0.0025 (9)−0.0028 (10)
C150.0180 (13)0.0197 (15)0.0167 (12)0.0020 (11)−0.0008 (10)−0.0011 (10)
N60.0163 (11)0.0157 (12)0.0208 (11)0.0034 (9)−0.0005 (8)0.0031 (9)
N70.0190 (11)0.0135 (11)0.0171 (10)0.0001 (9)0.0012 (8)0.0004 (9)
N80.0142 (10)0.0154 (12)0.0227 (11)0.0021 (9)−0.0021 (8)0.0005 (9)
N90.0200 (12)0.0127 (12)0.0290 (12)0.0035 (9)−0.0014 (9)−0.0056 (10)
N100.0198 (12)0.0177 (13)0.0342 (13)0.0039 (10)−0.0042 (10)−0.0051 (10)
C230.0201 (13)0.0146 (13)0.0174 (12)−0.0003 (10)0.0049 (10)0.0027 (10)
C240.0250 (14)0.0169 (14)0.0272 (14)0.0042 (11)0.0062 (11)0.0025 (11)
C250.0318 (15)0.0137 (14)0.0312 (15)−0.0006 (12)0.0112 (12)−0.0005 (12)
C260.0268 (14)0.0190 (14)0.0262 (14)−0.0059 (12)0.0044 (11)−0.0033 (12)
C270.0185 (13)0.0205 (15)0.0234 (13)−0.0014 (11)0.0050 (10)0.0014 (11)
C280.0203 (13)0.0150 (13)0.0156 (12)0.0009 (10)0.0052 (10)0.0030 (10)
C290.0178 (13)0.0161 (14)0.0148 (12)0.0009 (10)0.0021 (9)0.0030 (10)
C300.0184 (13)0.0166 (14)0.0153 (12)−0.0007 (10)0.0007 (10)0.0001 (10)
S10.0165 (3)0.0142 (3)0.0205 (3)0.0006 (2)0.0007 (2)0.0022 (3)
O10.0190 (9)0.0171 (10)0.0267 (9)0.0007 (7)−0.0013 (7)0.0067 (8)
O20.0166 (9)0.0212 (10)0.0245 (9)0.0000 (7)0.0024 (7)0.0013 (8)
O30.0222 (9)0.0130 (9)0.0245 (9)−0.0008 (7)−0.0026 (7)0.0001 (7)
C10.0182 (13)0.0117 (13)0.0246 (13)−0.0023 (10)0.0032 (10)0.0000 (11)
C20.0279 (15)0.0370 (17)0.0272 (14)0.0119 (13)0.0009 (12)−0.0022 (13)
C30.0344 (17)0.049 (2)0.0254 (15)0.0067 (14)−0.0032 (12)−0.0034 (14)
C40.0267 (15)0.0379 (18)0.0291 (15)−0.0119 (13)0.0026 (12)−0.0130 (13)
C50.0242 (15)0.051 (2)0.0404 (18)0.0084 (14)0.0052 (13)−0.0144 (15)
C60.0251 (15)0.0411 (19)0.0302 (15)0.0109 (13)−0.0043 (12)−0.0029 (14)
C70.0329 (17)0.073 (3)0.0332 (17)−0.0122 (16)0.0085 (13)−0.0214 (17)
S20.0163 (3)0.0140 (3)0.0206 (3)0.0006 (2)−0.0008 (2)−0.0022 (3)
O40.0170 (9)0.0209 (10)0.0253 (9)0.0016 (7)−0.0014 (7)−0.0022 (8)
O50.0213 (9)0.0137 (10)0.0279 (9)−0.0003 (7)0.0010 (7)−0.0009 (8)
O60.0196 (9)0.0186 (10)0.0271 (9)0.0019 (7)0.0010 (7)−0.0054 (8)
C160.0260 (15)0.0418 (19)0.0311 (15)0.0109 (13)0.0044 (12)0.0083 (14)
C170.0252 (16)0.053 (2)0.0410 (18)0.0095 (14)−0.0048 (13)0.0168 (16)
C180.0275 (15)0.0349 (18)0.0262 (14)−0.0088 (13)−0.0032 (11)0.0110 (13)
C190.0334 (16)0.048 (2)0.0245 (15)0.0070 (14)0.0019 (12)0.0014 (14)
C200.0271 (15)0.0367 (17)0.0266 (14)0.0116 (13)−0.0002 (11)0.0016 (13)
C210.0194 (13)0.0114 (13)0.0226 (13)−0.0029 (10)−0.0044 (10)0.0016 (10)
C220.0365 (18)0.075 (3)0.0342 (17)−0.0139 (17)−0.0102 (14)0.0238 (18)
S1—O21.4490 (16)C9—H90.9500
S1—O31.4642 (17)C10—H100.9500
S1—O11.4624 (18)C11—H110.9500
S1—C11.767 (3)C12—H120.9500
S2—C211.766 (2)C23—C241.393 (4)
S2—O61.4659 (18)C23—C281.397 (3)
S2—O51.4681 (17)C24—C251.381 (4)
S2—O41.4451 (17)C25—C261.393 (4)
N1—C141.356 (3)C26—C271.387 (4)
N1—C81.388 (3)C27—C281.389 (3)
N2—C141.305 (3)C24—H240.9500
N2—C131.396 (3)C25—H250.9500
N3—C151.357 (3)C26—H260.9500
N3—C141.386 (3)C27—H270.9500
N4—C151.314 (3)C1—C61.379 (3)
N5—C151.321 (3)C1—C21.379 (4)
N1—HN10.86 (2)C2—C31.382 (4)
N3—HN30.855 (18)C3—C41.380 (4)
N4—H4A0.87 (2)C4—C71.505 (4)
N4—H4B0.87 (2)C4—C51.380 (4)
N5—H5A0.893 (18)C5—C61.385 (4)
N5—H5B0.88 (2)C2—H20.9500
N6—C291.361 (3)C3—H30.9500
N6—C231.388 (3)C5—H50.9500
N7—C281.401 (3)C6—H60.9500
N7—C291.309 (3)C7—H7B0.9800
N8—C291.384 (3)C7—H7C0.9800
N8—C301.362 (3)C7—H7A0.9800
N9—C301.315 (3)C16—C171.391 (4)
N10—C301.319 (3)C16—C211.376 (4)
N6—HN60.88 (2)C17—C181.379 (4)
N8—HN80.870 (18)C18—C191.381 (4)
N9—H9B0.85 (2)C18—C221.504 (4)
N9—H9A0.86 (2)C19—C201.376 (4)
N10—H10B0.885 (19)C20—C211.376 (4)
N10—H10A0.88 (2)C16—H160.9500
C8—C91.386 (4)C17—H170.9500
C8—C131.400 (3)C19—H190.9500
C9—C101.384 (4)C20—H200.9500
C10—C111.394 (4)C22—H22A0.9800
C11—C121.386 (4)C22—H22B0.9800
C12—C131.391 (3)C22—H22C0.9800
O2—S1—C1106.62 (10)C25—C26—C27121.2 (2)
O3—S1—C1106.28 (10)C26—C27—C28117.5 (2)
O1—S1—O3111.02 (10)N7—C28—C23109.9 (2)
O1—S1—C1107.21 (10)N7—C28—C27129.5 (2)
O1—S1—O2112.88 (9)C23—C28—C27120.6 (2)
O2—S1—O3112.38 (9)N7—C29—N8125.5 (2)
O6—S2—C21107.36 (11)N6—C29—N7114.7 (2)
O4—S2—O5112.31 (10)N6—C29—N8119.8 (2)
O5—S2—C21106.21 (11)N8—C30—N10118.1 (2)
O5—S2—O6110.96 (10)N8—C30—N9120.2 (2)
O4—S2—O6113.00 (10)N9—C30—N10121.8 (2)
O4—S2—C21106.55 (11)C25—C24—H24122.00
C8—N1—C14105.87 (19)C23—C24—H24122.00
C13—N2—C14104.01 (19)C24—C25—H25119.00
C14—N3—C15125.4 (2)C26—C25—H25119.00
C8—N1—HN1125.5 (17)C25—C26—H26119.00
C14—N1—HN1127.1 (16)C27—C26—H26119.00
C14—N3—HN3116.2 (18)C28—C27—H27121.00
C15—N3—HN3118.0 (18)C26—C27—H27121.00
C15—N4—H4A115.7 (16)S1—C1—C6121.45 (19)
C15—N4—H4B122.2 (15)S1—C1—C2118.58 (18)
H4A—N4—H4B122 (2)C2—C1—C6119.8 (2)
C15—N5—H5A120.4 (18)C1—C2—C3120.1 (2)
H5A—N5—H5B123 (2)C2—C3—C4121.3 (3)
C15—N5—H5B115.2 (16)C5—C4—C7121.3 (2)
C23—N6—C29105.77 (19)C3—C4—C5117.7 (3)
C28—N7—C29103.93 (19)C3—C4—C7121.1 (2)
C29—N8—C30125.0 (2)C4—C5—C6122.1 (2)
C29—N6—HN6126.1 (17)C1—C6—C5119.1 (2)
C23—N6—HN6126.6 (18)C1—C2—H2120.00
C29—N8—HN8114.7 (17)C3—C2—H2120.00
C30—N8—HN8120.1 (18)C4—C3—H3119.00
C30—N9—H9B117.1 (16)C2—C3—H3119.00
C30—N9—H9A115.7 (16)C4—C5—H5119.00
H9A—N9—H9B127 (2)C6—C5—H5119.00
C30—N10—H10B122.5 (18)C1—C6—H6120.00
H10A—N10—H10B122 (2)C5—C6—H6120.00
C30—N10—H10A115.1 (16)H7B—C7—H7C110.00
C9—C8—C13122.2 (2)C4—C7—H7A109.00
N1—C8—C13105.3 (2)C4—C7—H7B110.00
N1—C8—C9132.5 (2)C4—C7—H7C109.00
C8—C9—C10116.7 (2)H7A—C7—H7B109.00
C9—C10—C11121.8 (2)H7A—C7—H7C109.00
C10—C11—C12121.4 (2)C17—C16—C21119.2 (2)
C11—C12—C13117.5 (2)C16—C17—C18121.8 (2)
N2—C13—C8110.0 (2)C17—C18—C19117.5 (2)
C8—C13—C12120.5 (2)C17—C18—C22121.2 (2)
N2—C13—C12129.6 (2)C19—C18—C22121.2 (2)
N1—C14—N3119.8 (2)C18—C19—C20121.5 (2)
N1—C14—N2114.9 (2)C19—C20—C21120.2 (2)
N2—C14—N3125.3 (2)S2—C21—C16121.26 (19)
N4—C15—N5121.7 (2)S2—C21—C20118.83 (19)
N3—C15—N5118.3 (2)C16—C21—C20119.7 (2)
N3—C15—N4119.9 (2)C17—C16—H16120.00
C10—C9—H9122.00C21—C16—H16120.00
C8—C9—H9122.00C16—C17—H17119.00
C11—C10—H10119.00C18—C17—H17119.00
C9—C10—H10119.00C18—C19—H19119.00
C10—C11—H11119.00C20—C19—H19119.00
C12—C11—H11119.00C19—C20—H20120.00
C13—C12—H12121.00C21—C20—H20120.00
C11—C12—H12121.00C18—C22—H22A109.00
N6—C23—C24132.2 (2)C18—C22—H22B109.00
N6—C23—C28105.6 (2)C18—C22—H22C109.00
C24—C23—C28122.2 (2)H22A—C22—H22B109.00
C23—C24—C25116.4 (2)H22A—C22—H22C110.00
C24—C25—C26122.1 (2)H22B—C22—H22C109.00
O1—S1—C1—C2152.0 (2)C13—C8—C9—C100.1 (4)
O2—S1—C1—C230.8 (2)N1—C8—C9—C10179.8 (2)
O3—S1—C1—C2−89.3 (2)N1—C8—C13—C12179.1 (2)
O1—S1—C1—C6−32.8 (2)C8—C9—C10—C111.0 (4)
O2—S1—C1—C6−153.9 (2)C9—C10—C11—C12−0.9 (4)
O3—S1—C1—C686.0 (2)C10—C11—C12—C13−0.2 (4)
O5—S2—C21—C2089.1 (2)C11—C12—C13—C81.2 (3)
O6—S2—C21—C20−152.1 (2)C11—C12—C13—N2−179.0 (2)
O6—S2—C21—C1632.8 (2)C28—C23—C24—C25−0.4 (4)
O4—S2—C21—C16154.2 (2)N6—C23—C24—C25179.7 (2)
O5—S2—C21—C16−85.9 (2)C24—C23—C28—N7179.0 (2)
O4—S2—C21—C20−30.8 (2)N6—C23—C28—N7−1.0 (3)
C14—N1—C8—C9−178.3 (3)N6—C23—C28—C27179.2 (2)
C14—N1—C8—C131.4 (2)C24—C23—C28—C27−0.8 (4)
C8—N1—C14—N3178.5 (2)C23—C24—C25—C261.1 (4)
C8—N1—C14—N2−1.8 (3)C24—C25—C26—C27−0.8 (4)
C13—N2—C14—N3−179.0 (2)C25—C26—C27—C28−0.4 (4)
C14—N2—C13—C8−0.3 (3)C26—C27—C28—C231.2 (3)
C13—N2—C14—N11.3 (3)C26—C27—C28—N7−178.6 (2)
C14—N2—C13—C12180.0 (2)S1—C1—C2—C3175.1 (2)
C14—N3—C15—N5−178.4 (2)C2—C1—C6—C50.8 (4)
C15—N3—C14—N23.6 (4)C6—C1—C2—C3−0.3 (4)
C14—N3—C15—N43.5 (4)S1—C1—C6—C5−174.4 (2)
C15—N3—C14—N1−176.6 (2)C1—C2—C3—C40.1 (4)
C23—N6—C29—N8178.4 (2)C2—C3—C4—C7−179.7 (3)
C23—N6—C29—N7−1.5 (3)C2—C3—C4—C5−0.4 (4)
C29—N6—C23—C24−178.6 (3)C3—C4—C5—C61.0 (5)
C29—N6—C23—C281.5 (2)C7—C4—C5—C6−179.8 (3)
C28—N7—C29—N8−179.1 (2)C4—C5—C6—C1−1.1 (5)
C29—N7—C28—C27180.0 (3)C17—C16—C21—C20−0.3 (4)
C29—N7—C28—C230.2 (3)C17—C16—C21—S2174.8 (2)
C28—N7—C29—N60.8 (3)C21—C16—C17—C180.7 (5)
C30—N8—C29—N6−176.5 (2)C16—C17—C18—C19−0.8 (5)
C29—N8—C30—N93.6 (4)C16—C17—C18—C22−179.8 (3)
C30—N8—C29—N73.4 (4)C17—C18—C19—C200.5 (4)
C29—N8—C30—N10−178.4 (2)C22—C18—C19—C20179.5 (3)
N1—C8—C13—N2−0.7 (3)C18—C19—C20—C21−0.1 (4)
C9—C8—C13—N2179.0 (2)C19—C20—C21—C160.0 (4)
C9—C8—C13—C12−1.2 (4)C19—C20—C21—S2−175.2 (2)
D—H···AD—HH···AD···AD—H···A
N1—HN1···O1i0.86 (2)2.11 (2)2.948 (3)166 (2)
N3—HN3···O6ii0.86 (2)1.95 (2)2.805 (3)173 (2)
N6—HN6···O6iii0.88 (2)2.09 (2)2.944 (3)164 (2)
N8—HN8···O1iv0.87 (2)1.93 (2)2.799 (2)177 (2)
N4—H4A···N20.87 (2)1.97 (2)2.686 (3)139 (2)
N4—H4B···O30.87 (2)2.06 (2)2.909 (3)166 (2)
N5—H5A···O5ii0.89 (2)1.98 (2)2.871 (3)176 (3)
N5—H5B···O20.88 (2)1.99 (2)2.863 (3)169 (3)
N9—H9A···N70.86 (2)1.98 (2)2.683 (3)138 (2)
N9—H9B···O5v0.85 (2)2.06 (2)2.906 (3)174 (2)
N10—H10A···O4v0.88 (2)2.00 (2)2.863 (3)167 (3)
N10—H10B···O3iv0.89 (2)1.99 (2)2.872 (3)179 (3)
C2—H2···O20.952.572.929 (3)103
C7—H7C···O4vi0.982.533.283 (3)133
C20—H20···O40.952.572.928 (3)102
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—HN1⋯O1i 0.86 (2)2.11 (2)2.948 (3)166 (2)
N3—HN3⋯O6ii 0.86 (2)1.95 (2)2.805 (3)173 (2)
N6—HN6⋯O6iii 0.88 (2)2.09 (2)2.944 (3)164 (2)
N8—HN8⋯O1iv 0.87 (2)1.93 (2)2.799 (2)177 (2)
N4—H4A⋯N20.87 (2)1.97 (2)2.686 (3)139 (2)
N4—H4B⋯O30.87 (2)2.06 (2)2.909 (3)166 (2)
N5—H5A⋯O5ii 0.89 (2)1.98 (2)2.871 (3)176 (3)
N5—H5B⋯O20.88 (2)1.99 (2)2.863 (3)169 (3)
N9—H9A⋯N70.86 (2)1.98 (2)2.683 (3)138 (2)
N9—H9B⋯O5v 0.85 (2)2.06 (2)2.906 (3)174 (2)
N10—H10A⋯O4v 0.88 (2)2.00 (2)2.863 (3)167 (3)
N10—H10B⋯O3iv 0.89 (2)1.99 (2)2.872 (3)179 (3)
C7—H7C⋯O4vi 0.982.533.283 (3)133

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .

  6 in total

1.  Basicity of some organic superbases in acetonitrile.

Authors:  B Kovacevic; Z B Maksic
Journal:  Org Lett       Date:  2001-05-17       Impact factor: 6.005

Review 2.  Guanidino-containing drugs in cancer chemotherapy: biochemical and clinical pharmacology.

Authors:  S Ekelund; P Nygren; R Larsson
Journal:  Biochem Pharmacol       Date:  2001-05-15       Impact factor: 5.858

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Solid-phase synthesis of trisubsituted guanidines.

Authors:  Thutam P Hopkins; Jeffrey M Dener; Armen M Boldi
Journal:  J Comb Chem       Date:  2002 Mar-Apr

5.  Direct synthesis of guanidines using di(imidazole-1-yl)methanimine.

Authors:  Yong-Qian Wu; Sean K Hamilton; Douglas E Wilkinson; Gregory S Hamilton
Journal:  J Org Chem       Date:  2002-10-18       Impact factor: 4.354

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  6 in total

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