| Literature DB >> 24098215 |
Giuseppina Roviello1, Fabio Borbone, Antonio Carella, Giovanni N Roviello, Angela Tuzi.
Abstract
The title compound, C22H28N2O6, crystallizes with one half-mol-ecule in the independent unit, the mol-ecule being located on an inversion centre. The penthyl groups are in the all-trans conformation and an almost planar conformation of the whole mol-ecule is observed [maximum deviation from the least-squares plane through all non-H atoms is 0.0229 (17) Å for an N atom]. The amino groups are involved in intra- and inter-molecular hydrogen bonds. Intra-molecular hydrogen bonding involving the amino group and ester carbonyl helps to lock the syn conformation of the ester with respect to the amino group. In the crystal, N-H⋯O hydrogen bonding involving the amino group and the furan and ester carbonyl O atoms self-assembles the mol-ecules into a two-dimensional hydrogen-bonded network parallel to (010) that displays inter-digital packing sustained by alk-yl-alkyl inter-actions.Entities:
Year: 2013 PMID: 24098215 PMCID: PMC3790396 DOI: 10.1107/S160053681302480X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C22H28N2O6 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 75 reflections |
| θ = 3.1–16.9° | |
| µ = 0.09 mm−1 | |
| β = 98.98 (2)° | Block, grey |
| 0.50 × 0.04 × 0.01 mm | |
| Bruker–Nonius KappaCCD diffractometer | 2626 independent reflections |
| Radiation source: normal-focus sealed tube | 1258 reflections with |
| Graphite monochromator | |
| Detector resolution: 9 pixels mm-1 | θmax = 27.5°, θmin = 3.2° |
| CCD rotation images, thick slices scans | |
| Absorption correction: multi-scan ( | |
| 11093 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2626 reflections | (Δ/σ)max < 0.001 |
| 142 parameters | Δρmax = 0.19 e Å−3 |
| 0 restraints | Δρmin = −0.20 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.5923 (2) | 0.1341 (3) | 0.04464 (11) | 0.0257 (5) | |
| H1 | 0.6556 | 0.2314 | 0.0731 | 0.026* | |
| C2 | 0.5354 (2) | −0.0094 (3) | 0.07682 (11) | 0.0246 (5) | |
| C3 | 0.4461 (2) | −0.1426 (3) | 0.03695 (11) | 0.0255 (5) | |
| C4 | 0.4171 (2) | −0.2648 (3) | 0.09645 (11) | 0.0254 (5) | |
| C5 | 0.4884 (3) | −0.1957 (3) | 0.16650 (12) | 0.0282 (5) | |
| C6 | 0.3356 (2) | −0.4269 (3) | 0.09113 (12) | 0.0288 (6) | |
| C7 | 0.1878 (3) | −0.6355 (3) | 0.00858 (11) | 0.0326 (6) | |
| H7A | 0.0935 | −0.6356 | 0.0370 | 0.033* | |
| H7B | 0.2644 | −0.7250 | 0.0301 | 0.033* | |
| C8 | 0.1290 (3) | −0.6679 (3) | −0.07634 (12) | 0.0340 (6) | |
| H8A | 0.2242 | −0.6700 | −0.1043 | 0.034* | |
| H8B | 0.0556 | −0.5760 | −0.0979 | 0.034* | |
| C9 | 0.0363 (3) | −0.8366 (3) | −0.08811 (12) | 0.0382 (6) | |
| H9A | 0.1101 | −0.9271 | −0.0654 | 0.038* | |
| H9B | −0.0583 | −0.8331 | −0.0598 | 0.038* | |
| C10 | −0.0261 (3) | −0.8793 (3) | −0.17302 (13) | 0.0472 (7) | |
| H10A | 0.0678 | −0.8822 | −0.2017 | 0.047* | |
| H10B | −0.1019 | −0.7904 | −0.1958 | 0.047* | |
| C11 | −0.1155 (4) | −1.0494 (3) | −0.18205 (16) | 0.0632 (8) | |
| H11A | −0.1539 | −1.0711 | −0.2367 | 0.063* | |
| H11B | −0.2094 | −1.0467 | −0.1542 | 0.063* | |
| H11C | −0.0400 | −1.1383 | −0.1609 | 0.063* | |
| N1 | 0.4973 (3) | −0.2479 (3) | 0.23935 (11) | 0.0383 (6) | |
| H1A | 0.550 (3) | −0.192 (3) | 0.2748 (12) | 0.038* | |
| H1B | 0.454 (3) | −0.340 (3) | 0.2485 (12) | 0.038* | |
| O1 | 0.56177 (16) | −0.04310 (18) | 0.15705 (7) | 0.0292 (4) | |
| O2 | 0.32315 (19) | −0.51874 (18) | 0.14725 (8) | 0.0377 (4) | |
| O3 | 0.27143 (17) | −0.47150 (17) | 0.01739 (8) | 0.0324 (4) |
| C1 | 0.0243 (13) | 0.0246 (14) | 0.0275 (12) | 0.0019 (10) | 0.0017 (10) | −0.0028 (10) |
| C2 | 0.0267 (12) | 0.0283 (14) | 0.0184 (11) | 0.0051 (11) | 0.0018 (9) | 0.0001 (10) |
| C3 | 0.0225 (12) | 0.0268 (14) | 0.0271 (12) | 0.0040 (10) | 0.0039 (10) | −0.0032 (10) |
| C4 | 0.0263 (12) | 0.0216 (13) | 0.0271 (12) | 0.0021 (10) | 0.0009 (10) | −0.0009 (10) |
| C5 | 0.0289 (13) | 0.0252 (15) | 0.0303 (13) | 0.0008 (11) | 0.0039 (10) | 0.0012 (11) |
| C6 | 0.0260 (13) | 0.0305 (15) | 0.0286 (13) | 0.0076 (11) | −0.0001 (10) | −0.0006 (11) |
| C7 | 0.0304 (13) | 0.0269 (14) | 0.0400 (14) | −0.0019 (11) | 0.0041 (11) | −0.0014 (11) |
| C8 | 0.0282 (13) | 0.0345 (16) | 0.0385 (13) | 0.0024 (11) | 0.0029 (11) | −0.0043 (11) |
| C9 | 0.0292 (13) | 0.0355 (16) | 0.0487 (15) | 0.0032 (11) | 0.0025 (12) | −0.0065 (12) |
| C10 | 0.0432 (16) | 0.0499 (18) | 0.0483 (15) | −0.0056 (14) | 0.0068 (13) | −0.0135 (13) |
| C11 | 0.0620 (19) | 0.054 (2) | 0.073 (2) | −0.0181 (16) | 0.0085 (16) | −0.0242 (15) |
| N1 | 0.0530 (14) | 0.0320 (14) | 0.0268 (12) | −0.0109 (11) | −0.0033 (10) | 0.0022 (10) |
| O1 | 0.0350 (9) | 0.0296 (10) | 0.0224 (8) | −0.0013 (7) | 0.0025 (7) | 0.0006 (7) |
| O2 | 0.0489 (10) | 0.0313 (10) | 0.0307 (9) | −0.0033 (8) | −0.0003 (7) | 0.0075 (7) |
| O3 | 0.0373 (9) | 0.0293 (10) | 0.0289 (9) | −0.0043 (7) | 0.0001 (7) | −0.0010 (7) |
| C1—C2 | 1.393 (3) | C7—H7B | 0.9900 |
| C1—C3i | 1.422 (3) | C8—C9 | 1.549 (3) |
| C1—H1 | 1.0231 | C8—H8A | 0.9900 |
| C2—C3 | 1.418 (3) | C8—H8B | 0.9900 |
| C2—O1 | 1.419 (2) | C9—C10 | 1.540 (3) |
| C3—C1i | 1.422 (3) | C9—H9A | 0.9900 |
| C3—C4 | 1.477 (3) | C9—H9B | 0.9900 |
| C4—C5 | 1.394 (3) | C10—C11 | 1.543 (3) |
| C4—C6 | 1.457 (3) | C10—H10A | 0.9900 |
| C5—N1 | 1.338 (3) | C10—H10B | 0.9900 |
| C5—O1 | 1.384 (2) | C11—H11A | 0.9800 |
| C6—O2 | 1.247 (2) | C11—H11B | 0.9800 |
| C6—O3 | 1.369 (2) | C11—H11C | 0.9800 |
| C7—O3 | 1.479 (2) | N1—H1A | 0.83 (2) |
| C7—C8 | 1.518 (3) | N1—H1B | 0.84 (2) |
| C7—H7A | 0.9900 | ||
| C2—C1—C3i | 114.40 (18) | C7—C8—H8B | 109.5 |
| C2—C1—H1 | 127.3 | C9—C8—H8B | 109.5 |
| C3i—C1—H1 | 118.3 | H8A—C8—H8B | 108.1 |
| C1—C2—C3 | 126.93 (18) | C10—C9—C8 | 114.01 (19) |
| C1—C2—O1 | 123.44 (18) | C10—C9—H9A | 108.8 |
| C3—C2—O1 | 109.63 (17) | C8—C9—H9A | 108.8 |
| C2—C3—C1i | 118.67 (18) | C10—C9—H9B | 108.8 |
| C2—C3—C4 | 106.02 (17) | C8—C9—H9B | 108.8 |
| C1i—C3—C4 | 135.31 (19) | H9A—C9—H9B | 107.6 |
| C5—C4—C6 | 122.45 (19) | C9—C10—C11 | 112.2 (2) |
| C5—C4—C3 | 105.72 (18) | C9—C10—H10A | 109.2 |
| C6—C4—C3 | 131.82 (18) | C11—C10—H10A | 109.2 |
| N1—C5—O1 | 115.50 (19) | C9—C10—H10B | 109.2 |
| N1—C5—C4 | 132.4 (2) | C11—C10—H10B | 109.2 |
| O1—C5—C4 | 112.08 (18) | H10A—C10—H10B | 107.9 |
| O2—C6—O3 | 121.9 (2) | C10—C11—H11A | 109.5 |
| O2—C6—C4 | 124.58 (19) | C10—C11—H11B | 109.5 |
| O3—C6—C4 | 113.54 (18) | H11A—C11—H11B | 109.5 |
| O3—C7—C8 | 109.05 (16) | C10—C11—H11C | 109.5 |
| O3—C7—H7A | 109.9 | H11A—C11—H11C | 109.5 |
| C8—C7—H7A | 109.9 | H11B—C11—H11C | 109.5 |
| O3—C7—H7B | 109.9 | C5—N1—H1A | 119.4 (15) |
| C8—C7—H7B | 109.9 | C5—N1—H1B | 119.5 (15) |
| H7A—C7—H7B | 108.3 | H1A—N1—H1B | 121 (2) |
| C7—C8—C9 | 110.81 (18) | C5—O1—C2 | 106.54 (16) |
| C7—C8—H8A | 109.5 | C6—O3—C7 | 115.84 (15) |
| C9—C8—H8A | 109.5 | ||
| C3i—C1—C2—C3 | 0.1 (3) | C5—C4—C6—O2 | −0.8 (3) |
| C3i—C1—C2—O1 | 179.41 (17) | C3—C4—C6—O2 | 178.5 (2) |
| C1—C2—C3—C1i | −0.1 (3) | C5—C4—C6—O3 | 179.06 (18) |
| O1—C2—C3—C1i | −179.49 (16) | C3—C4—C6—O3 | −1.6 (3) |
| C1—C2—C3—C4 | 179.22 (19) | O3—C7—C8—C9 | −178.43 (16) |
| O1—C2—C3—C4 | −0.2 (2) | C7—C8—C9—C10 | −179.49 (19) |
| C2—C3—C4—C5 | 0.7 (2) | C8—C9—C10—C11 | 179.2 (2) |
| C1i—C3—C4—C5 | 179.8 (2) | N1—C5—O1—C2 | −178.64 (17) |
| C2—C3—C4—C6 | −178.7 (2) | C4—C5—O1—C2 | 0.8 (2) |
| C1i—C3—C4—C6 | 0.4 (4) | C1—C2—O1—C5 | −179.79 (18) |
| C6—C4—C5—N1 | −2.1 (4) | C3—C2—O1—C5 | −0.3 (2) |
| C3—C4—C5—N1 | 178.4 (2) | O2—C6—O3—C7 | −0.4 (3) |
| C6—C4—C5—O1 | 178.55 (17) | C4—C6—O3—C7 | 179.72 (16) |
| C3—C4—C5—O1 | −0.9 (2) | C8—C7—O3—C6 | −178.24 (17) |
| H··· | ||||
| N1—H1 | 0.83 (2) | 2.11 (2) | 2.935 (3) | 171 (2) |
| N1—H1 | 0.84 (2) | 2.34 (2) | 3.066 (2) | 144 (2) |
| N1—H1 | 0.84 (2) | 2.41 (2) | 2.942 (3) | 122.2 (18) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.83 (2) | 2.11 (2) | 2.935 (3) | 171 (2) |
| N1—H1 | 0.84 (2) | 2.34 (2) | 3.066 (2) | 144 (2) |
| N1—H1 | 0.84 (2) | 2.41 (2) | 2.942 (3) | 122.2 (18) |
Symmetry codes: (i) ; (ii) .