Literature DB >> 24096577

Watching DNA breath one molecule at a time.

Jingyi Fei1, Taekjip Ha.   

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Year:  2013        PMID： 24096577      PMCID： PMC3808658          DOI： 10.1073/pnas.1316493110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


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  15 in total

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Review 4.  Dynamic coupling between the motors of DNA replication: hexameric helicase, DNA polymerase, and primase.

Authors:  Smita S Patel; Manjula Pandey; Divya Nandakumar
Journal:  Curr Opin Chem Biol       Date:  2011-08-22       Impact factor: 8.822

5.  Extreme bendability of DNA less than 100 base pairs long revealed by single-molecule cyclization.

Authors:  Reza Vafabakhsh; Taekjip Ha
Journal:  Science       Date:  2012-08-31       Impact factor: 47.728

Review 6.  Nucleic acid modifications with epigenetic significance.

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7.  Temperature-dependence of UV laser one-electron oxidative guanine modifications as a probe of local stacking fluctuations and conformational transitions.

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8.  Characterization of base-pair opening in deoxynucleotide duplexes using catalyzed exchange of the imino proton.

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9.  DNA breathing dynamics distinguish binding from nonbinding consensus sites for transcription factor YY1 in cells.

Authors:  Boian S Alexandrov; Yayoi Fukuyo; Martin Lange; Nobuo Horikoshi; Vladimir Gelev; Kim Ø Rasmussen; Alan R Bishop; Anny Usheva
Journal:  Nucleic Acids Res       Date:  2012-08-16       Impact factor: 16.971

Review 10.  Mapping recently identified nucleotide variants in the genome and transcriptome.

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  14 in total

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Journal:  J Biol Chem       Date:  2020-03-11       Impact factor: 5.157

Review 3.  The effects of chromatin organization on variation in mutation rates in the genome.

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Journal:  Nat Rev Genet       Date:  2015-03-03       Impact factor: 53.242

Review 4.  The dynamic, motile and deformative properties of RNA nanoparticles facilitate the third milestone of drug development.

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5.  Multiplexed Elimination of Wild-Type DNA and High-Resolution Melting Prior to Targeted Resequencing of Liquid Biopsies.

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6.  Energetics of base flipping at a DNA mismatch site confined at the latch constriction of α-hemolysin.

Authors:  Robert P Johnson; Rukshan T Perera; Aaron M Fleming; Cynthia J Burrows; Henry S White
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7.  Helicase-like functions in phosphate loop containing beta-alpha polypeptides.

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8.  Long-timescale dynamics of the Drew-Dickerson dodecamer.

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Journal:  Nucleic Acids Res       Date:  2016-04-15       Impact factor: 16.971

9.  Enhancement of RecA-mediated self-assembly in DNA nanostructures through basepair mismatches and single-strand nicks.

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10.  Finding of widespread viral and bacterial revolution dsDNA translocation motors distinct from rotation motors by channel chirality and size.

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Journal:  Cell Biosci       Date:  2014-06-01       Impact factor: 7.133
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