Literature DB >> 24087834

The sensitivity of Turing self-organization to biological feedback delays: 2D models of fish pigmentation.

E A Gaffney1, S Seirin Lee2.   

Abstract

Turing morphogen models have been extensively explored in the context of large-scale self-organization in multicellular biological systems. However, reconciling the detailed biology of morphogen dynamics, while accounting for time delays associated with gene expression, reveals aberrant behaviours that are not consistent with early developmental self-organization, especially the requirement for exquisite temporal control. Attempts to reconcile the interpretation of Turing's ideas with an increasing understanding of the mechanisms driving zebrafish pigmentation suggests that one should reconsider Turing's model in terms of pigment cells rather than morphogens (Nakamasu et al., 2009, PNAS, 106: , 8429-8434; Yamaguchi et al., 2007, PNAS, 104: , 4790-4793). Here the dynamics of pigment cells is subject to response delays implicit in the cell cycle and apoptosis. Hence we explore simulations of fish skin patterning, focussing on the dynamical influence of gene expression delays in morphogen-based Turing models and response delays for cell-based Turing models. We find that reconciling the mechanisms driving the behaviour of Turing systems with observations of fish skin patterning remains a fundamental challenge.
© The Authors 2013. Published by Oxford University Press on behalf of the Institute of Mathematics and its Applications. All rights reserved.

Entities:  

Keywords:  Turing pattern formation; biological feedback delays; fish skin patterns

Mesh:

Year:  2013        PMID: 24087834     DOI: 10.1093/imammb/dqt017

Source DB:  PubMed          Journal:  Math Med Biol        ISSN: 1477-8599            Impact factor:   1.854


  4 in total

1.  Turing's model for biological pattern formation and the robustness problem.

Authors:  Philip K Maini; Thomas E Woolley; Ruth E Baker; Eamonn A Gaffney; S Seirin Lee
Journal:  Interface Focus       Date:  2012-02-08       Impact factor: 3.906

2.  Modelling stripe formation in zebrafish: an agent-based approach.

Authors:  Alexandria Volkening; Björn Sandstede
Journal:  J R Soc Interface       Date:  2015-11-06       Impact factor: 4.118

Review 3.  Modern perspectives on near-equilibrium analysis of Turing systems.

Authors:  Andrew L Krause; Eamonn A Gaffney; Philip K Maini; Václav Klika
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2021-11-08       Impact factor: 4.226

4.  Iridophores as a source of robustness in zebrafish stripes and variability in Danio patterns.

Authors:  Alexandria Volkening; Björn Sandstede
Journal:  Nat Commun       Date:  2018-08-13       Impact factor: 14.919

  4 in total

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