Literature DB >> 24083463

Phosphoproteomic dynamics of chickpea (Cicer arietinum L.) reveals shared and distinct components of dehydration response.

Pratigya Subba1, Pragya Barua, Rajiv Kumar, Asis Datta, Kamlesh Kumar Soni, Subhra Chakraborty, Niranjan Chakraborty.   

Abstract

Reversible protein phosphorylation is a ubiquitous regulatory mechanism that plays critical roles in transducing stress signals to bring about coordinated intracellular responses. To gain better understanding of dehydration response in plants, we have developed a differential phosphoproteome in a food legume, chickpea (Cicer arietinum L.). Three-week-old chickpea seedlings were subjected to progressive dehydration by withdrawing water, and the changes in the phosphorylation status of a large repertoire of proteins were monitored. The proteins were resolved by 2-DE and stained with phosphospecific fluorescent Pro-Q Diamond dye. Mass spectrometric analysis led to the identification of 91 putative phosphoproteins, presumably involved in a variety of functions including cell defense and rescue, photosynthesis and photorespiration, molecular chaperones, and ion transport, among others. Multiple sites of phosphorylation were predicted on several key elements, which include both the regulatory as well as the functional proteins. A critical survey of the phosphorylome revealed a DREPP (developmentally regulated plasma membrane protein) plasma membrane polypeptide family protein, henceforth designated CaDREPP1. The transcripts of CaDREPP1 were found to be differentially regulated under dehydration stress, further corroborating the proteomic results. This work provides new insights into the possible phosphorylation events triggered by the conditions of progressive water-deficit in plants.

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Year:  2013        PMID: 24083463     DOI: 10.1021/pr400628j

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  13 in total

1.  Significant and unique changes in phosphorylation levels of four phosphoproteins in two apple rootstock genotypes under drought stress.

Authors:  Jing Ren; Juan Mao; Cunwu Zuo; Alejandro Calderón-Urrea; Mohammed Mujitaba Dawuda; Xin Zhao; Xinwen Li; Baihong Chen
Journal:  Mol Genet Genomics       Date:  2017-07-14       Impact factor: 3.291

2.  Regulation of color transition in purple tea (Camellia sinensis).

Authors:  Manglesh Kumari; Shweta Thakur; Ajay Kumar; Robin Joshi; Prakash Kumar; Ravi Shankar; Rajiv Kumar
Journal:  Planta       Date:  2019-12-18       Impact factor: 4.116

3.  Analysis of root proteome unravels differential molecular responses during compatible and incompatible interaction between chickpea (Cicer arietinum L.) and Fusarium oxysporum f. sp. ciceri Race1 (Foc1).

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Journal:  BMC Genomics       Date:  2014-11-03       Impact factor: 3.969

Review 4.  Recent Advances in Substrate Identification of Protein Kinases in Plants and Their Role in Stress Management.

Authors:  Saroj K Jha; Shikha Malik; Manisha Sharma; Amita Pandey; Girdhar K Pandey
Journal:  Curr Genomics       Date:  2017-12       Impact factor: 2.236

5.  Genotype-independent Agrobacterium rhizogenes-mediated root transformation of chickpea: a rapid and efficient method for reverse genetics studies.

Authors:  Pooja Rani Aggarwal; Papri Nag; Pooja Choudhary; Niranjan Chakraborty; Subhra Chakraborty
Journal:  Plant Methods       Date:  2018-07-06       Impact factor: 4.993

Review 6.  Heat Shock Proteins: Dynamic Biomolecules to Counter Plant Biotic and Abiotic Stresses.

Authors:  Saeed Ul Haq; Abid Khan; Muhammad Ali; Abdul Mateen Khattak; Wen-Xian Gai; Huai-Xia Zhang; Ai-Min Wei; Zhen-Hui Gong
Journal:  Int J Mol Sci       Date:  2019-10-25       Impact factor: 5.923

7.  Proteome dataset of chili pepper plant (Capsicum frutescens) infested by broad mite (Polyphagotarsonemus latus).

Authors:  Sachin S Patavardhan; Kriti Awasthi; Suhasini Suresh; Pratigya Subba; Mohd Altaf Najar; Leo D'Souza; Shashi Kiran Nivas; Thottethodi Subrahmanya Keshava Prasad
Journal:  Data Brief       Date:  2021-04-25

8.  Multiplex staining of 2-DE gels for an initial phosphoproteome analysis of germinating seeds and early grown seedlings from a non-orthodox specie: Quercus ilex L. subsp. ballota [Desf.] Samp.

Authors:  M Cristina Romero-Rodríguez; Nieves Abril; Rosa Sánchez-Lucas; Jesús V Jorrín-Novo
Journal:  Front Plant Sci       Date:  2015-08-11       Impact factor: 5.753

Review 9.  Proteomics and Metabolomics: Two Emerging Areas for Legume Improvement.

Authors:  Abirami Ramalingam; Himabindu Kudapa; Lekha T Pazhamala; Wolfram Weckwerth; Rajeev K Varshney
Journal:  Front Plant Sci       Date:  2015-12-24       Impact factor: 5.753

10.  Chickpea transcription factor CaTLP1 interacts with protein kinases, modulates ROS accumulation and promotes ABA-mediated stomatal closure.

Authors:  Vijay Wardhan; Aarti Pandey; Subhra Chakraborty; Niranjan Chakraborty
Journal:  Sci Rep       Date:  2016-12-09       Impact factor: 4.379

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