Literature DB >> 24076191

Crystal structure of human poly(A) polymerase gamma reveals a conserved catalytic core for canonical poly(A) polymerases.

Qin Yang1, Lydia W M Nausch2, Georges Martin3, Walter Keller3, Sylvie Doublié4.   

Abstract

In eukaryotes, the poly(A) tail added at the 3' end of an mRNA precursor is essential for the regulation of mRNA stability and the initiation of translation. Poly(A) polymerase (PAP) is the enzyme that catalyzes the poly(A) addition reaction. Multiple isoforms of PAP have been identified in vertebrates, which originate from gene duplication, alternative splicing or post-translational modifications. The complexity of PAP isoforms suggests that they might play different roles in the cell. Phylogenetic studies indicate that vertebrate PAPs are grouped into three clades termed α, β and γ, which originated from two gene duplication events. To date, all the available PAP structures are from the PAPα clade. Here, we present the crystal structure of the first representative of the PAPγ clade, human PAPγ bound to cordycepin triphosphate (3'dATP) and Ca(2+). The structure revealed that PAPγ closely resembles its PAPα ortholog. An analysis of residue conservation reveals a conserved catalytic binding pocket, whereas residues at the surface of the polymerase are more divergent.
© 2013.

Entities:  

Keywords:  3′ end processing; C-terminal domain; CTD; MCMC; Markov Chain Monte Carlo; N-terminal domain; NLS; NTD; PAP; PEG; RNA recognition motif; RRM; mRNA processing; neo-PAP; nuclear localization signals; poly(A) polymerase; poly(A) polymerase gamma; polyadenylation; polyethylene glycol

Mesh:

Substances:

Year:  2013        PMID: 24076191      PMCID: PMC3878066          DOI: 10.1016/j.jmb.2013.09.025

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


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