Literature DB >> 24071843

Complex genetics of drug resistance in Mycobacterium tuberculosis.

Digby F Warner1, Valerie Mizrahi.   

Abstract

Three new studies have used whole-genome sequencing of M. tuberculosis to demonstrate unexpected complexity in the modern evolution of drug-resistant tuberculosis, and a fourth study suggests a close evolutionary relationship between the pathogen and its human host over a period of 70,000 years. Collectively, the observations in these studies suggest that future strategies to tackle drug-resistant tuberculosis must integrate host genetics with detailed strain epidemiology.

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Year:  2013        PMID: 24071843     DOI: 10.1038/ng.2769

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  14 in total

1.  Pyrazinamide inhibits trans-translation in Mycobacterium tuberculosis.

Authors:  Wanliang Shi; Xuelian Zhang; Xin Jiang; Haiming Yuan; Jong Seok Lee; Clifton E Barry; Honghai Wang; Wenhong Zhang; Ying Zhang
Journal:  Science       Date:  2011-08-11       Impact factor: 47.728

2.  Genome sequencing of 161 Mycobacterium tuberculosis isolates from China identifies genes and intergenic regions associated with drug resistance.

Authors:  Hongtai Zhang; Dongfang Li; Lili Zhao; Joy Fleming; Nan Lin; Ting Wang; Zhangyi Liu; Chuanyou Li; Nicholas Galwey; Jiaoyu Deng; Ying Zhou; Yuanfang Zhu; Yunrong Gao; Tong Wang; Shihua Wang; Yufen Huang; Ming Wang; Qiu Zhong; Lin Zhou; Tao Chen; Jie Zhou; Ruifu Yang; Guofeng Zhu; Haiying Hang; Jia Zhang; Fabin Li; Kanglin Wan; Jun Wang; Xian-En Zhang; Lijun Bi
Journal:  Nat Genet       Date:  2013-09-01       Impact factor: 38.330

Review 3.  Advances in the development of new tuberculosis drugs and treatment regimens.

Authors:  Alimuddin Zumla; Payam Nahid; Stewart T Cole
Journal:  Nat Rev Drug Discov       Date:  2013-05       Impact factor: 84.694

4.  Mutations in extensively drug-resistant Mycobacterium tuberculosis that do not code for known drug-resistance mechanisms.

Authors:  Alifiya S Motiwala; Yang Dai; Edward C Jones-López; Soo-Hee Hwang; Jong Seok Lee; Sang Nae Cho; Laura E Via; Clifton E Barry; David Alland
Journal:  J Infect Dis       Date:  2010-03-15       Impact factor: 5.226

5.  Dynamic population changes in Mycobacterium tuberculosis during acquisition and fixation of drug resistance in patients.

Authors:  Gang Sun; Tao Luo; Chongguang Yang; Xinran Dong; Jing Li; Yongqiang Zhu; Huajun Zheng; Weidong Tian; Shengyue Wang; Clifton E Barry; Jian Mei; Qian Gao
Journal:  J Infect Dis       Date:  2012-09-14       Impact factor: 5.226

6.  In vitro combination studies of benzothiazinone lead compound BTZ043 against Mycobacterium tuberculosis.

Authors:  Benoit Lechartier; Ruben C Hartkoorn; Stewart T Cole
Journal:  Antimicrob Agents Chemother       Date:  2012-08-27       Impact factor: 5.191

7.  Out-of-Africa migration and Neolithic coexpansion of Mycobacterium tuberculosis with modern humans.

Authors:  Iñaki Comas; Mireia Coscolla; Tao Luo; Sonia Borrell; Kathryn E Holt; Midori Kato-Maeda; Julian Parkhill; Bijaya Malla; Stefan Berg; Guy Thwaites; Dorothy Yeboah-Manu; Graham Bothamley; Jian Mei; Lanhai Wei; Stephen Bentley; Simon R Harris; Stefan Niemann; Roland Diel; Abraham Aseffa; Qian Gao; Douglas Young; Sebastien Gagneux
Journal:  Nat Genet       Date:  2013-09-01       Impact factor: 38.330

8.  Genomic analysis identifies targets of convergent positive selection in drug-resistant Mycobacterium tuberculosis.

Authors:  Maha R Farhat; B Jesse Shapiro; Karen J Kieser; Razvan Sultana; Karen R Jacobson; Thomas C Victor; Robin M Warren; Elizabeth M Streicher; Alistair Calver; Alex Sloutsky; Devinder Kaur; Jamie E Posey; Bonnie Plikaytis; Marco R Oggioni; Jennifer L Gardy; James C Johnston; Mabel Rodrigues; Patrick K C Tang; Midori Kato-Maeda; Mark L Borowsky; Bhavana Muddukrishna; Barry N Kreiswirth; Natalia Kurepina; James Galagan; Sebastien Gagneux; Bruce Birren; Eric J Rubin; Eric S Lander; Pardis C Sabeti; Megan Murray
Journal:  Nat Genet       Date:  2013-09-01       Impact factor: 38.330

9.  Whole-genome sequencing for rapid susceptibility testing of M. tuberculosis.

Authors:  Claudio U Köser; Josephine M Bryant; Jennifer Becq; M Estée Török; Matthew J Ellington; Marc A Marti-Renom; Andrew J Carmichael; Julian Parkhill; Geoffrey P Smith; Sharon J Peacock
Journal:  N Engl J Med       Date:  2013-07-18       Impact factor: 91.245

10.  The role of selection in shaping diversity of natural M. tuberculosis populations.

Authors:  Caitlin S Pepperell; Amanda M Casto; Andrew Kitchen; Julie M Granka; Omar E Cornejo; Edward C Holmes; Eddie C Holmes; Bruce Birren; James Galagan; Marcus W Feldman
Journal:  PLoS Pathog       Date:  2013-08-15       Impact factor: 6.823

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  12 in total

1.  1,4-azaindole, a potential drug candidate for treatment of tuberculosis.

Authors:  Monalisa Chatterji; Radha Shandil; M R Manjunatha; Suresh Solapure; Vasanthi Ramachandran; Naveen Kumar; Ramanatha Saralaya; Vijender Panduga; Jitendar Reddy; K R Prabhakar; Sreevalli Sharma; Claire Sadler; Christopher B Cooper; Khisi Mdluli; Pravin S Iyer; Shridhar Narayanan; Pravin S Shirude
Journal:  Antimicrob Agents Chemother       Date:  2014-06-23       Impact factor: 5.191

2.  NR1D1 ameliorates Mycobacterium tuberculosis clearance through regulation of autophagy.

Authors:  Vemika Chandra; Ella Bhagyaraj; Ravikanth Nanduri; Nancy Ahuja; Pawan Gupta
Journal:  Autophagy       Date:  2015-11-02       Impact factor: 16.016

3.  Comparative genomic analysis of Mycobacterium tuberculosis clinical isolates.

Authors:  Fei Liu; Yongfei Hu; Qi Wang; Hong Min Li; George F Gao; Cui Hua Liu; Baoli Zhu
Journal:  BMC Genomics       Date:  2014-06-13       Impact factor: 3.969

Review 4.  Translating genomics research into control of tuberculosis: lessons learned and future prospects.

Authors:  Digby F Warner; Valerie Mizrahi
Journal:  Genome Biol       Date:  2014-11-07       Impact factor: 13.583

5.  KvarQ: targeted and direct variant calling from fastq reads of bacterial genomes.

Authors:  Andreas Steiner; David Stucki; Mireia Coscolla; Sonia Borrell; Sebastien Gagneux
Journal:  BMC Genomics       Date:  2014-10-09       Impact factor: 3.969

6.  The road to drug resistance in Mycobacterium tuberculosis.

Authors:  Anastasia Koch; Robert John Wilkinson
Journal:  Genome Biol       Date:  2014-11-13       Impact factor: 13.583

7.  MUBII-TB-DB: a database of mutations associated with antibiotic resistance in Mycobacterium tuberculosis.

Authors:  Jean-Pierre Flandrois; Gérard Lina; Oana Dumitrescu
Journal:  BMC Bioinformatics       Date:  2014-04-14       Impact factor: 3.169

Review 8.  Insights into battles between Mycobacterium tuberculosis and macrophages.

Authors:  Guanghua Xu; Jing Wang; George Fu Gao; Cui Hua Liu
Journal:  Protein Cell       Date:  2014-06-18       Impact factor: 14.870

Review 9.  Whole-genome sequencing to control antimicrobial resistance.

Authors:  Claudio U Köser; Matthew J Ellington; Sharon J Peacock
Journal:  Trends Genet       Date:  2014-08-03       Impact factor: 11.639

10.  Molecular epidemiology and clinical characteristics of drug-resistant Mycobacterium tuberculosis in a tuberculosis referral hospital in China.

Authors:  Qi Wang; Susanna K P Lau; Fei Liu; Yanlin Zhao; Hong Min Li; Bing Xi Li; Yong Liang Hu; Patrick C Y Woo; Cui Hua Liu
Journal:  PLoS One       Date:  2014-10-10       Impact factor: 3.240

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