Literature DB >> 24071720

Structural coupling of the EF hand and C-terminal GTPase domains in the mitochondrial protein Miro.

Julian L Klosowiak1, Pamela J Focia, Srinivas Chakravarthy, Eric C Landahl, Douglas M Freymann, Sarah E Rice.   

Abstract

Miro is a highly conserved calcium-binding GTPase at the regulatory nexus of mitochondrial transport and autophagy. Here we present crystal structures comprising the tandem EF hand and carboxy terminal GTPase (cGTPase) domains of Drosophila Miro. The structures reveal two previously unidentified 'hidden' EF hands, each paired with a canonical EF hand. Each EF hand pair is bound to a helix that structurally mimics an EF hand ligand. A key nucleotide-sensing element and a Pink1 phosphorylation site both lie within an extensive EF hand-cGTPase interface. Our results indicate structural mechanisms for calcium, nucleotide and phosphorylation-dependent regulation of mitochondrial function by Miro.

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Year:  2013        PMID: 24071720      PMCID: PMC3818075          DOI: 10.1038/embor.2013.151

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  31 in total

1.  Axonal transport of mitochondria to synapses depends on milton, a novel Drosophila protein.

Authors:  R Steven Stowers; Laura J Megeath; Jolanta Górska-Andrzejak; Ian A Meinertzhagen; Thomas L Schwarz
Journal:  Neuron       Date:  2002-12-19       Impact factor: 17.173

2.  The atypical Rho GTPases Miro-1 and Miro-2 have essential roles in mitochondrial trafficking.

Authors:  Sa Fransson; Aino Ruusala; Pontus Aspenström
Journal:  Biochem Biophys Res Commun       Date:  2006-04-03       Impact factor: 3.575

Review 3.  The GTPase superfamily: conserved structure and molecular mechanism.

Authors:  H R Bourne; D A Sanders; F McCormick
Journal:  Nature       Date:  1991-01-10       Impact factor: 49.962

4.  Atypical Rho GTPases have roles in mitochondrial homeostasis and apoptosis.

Authors:  Asa Fransson; Aino Ruusala; Pontus Aspenström
Journal:  J Biol Chem       Date:  2002-12-12       Impact factor: 5.157

5.  Molecular mechanics of calcium-myristoyl switches.

Authors:  J B Ames; R Ishima; T Tanaka; J I Gordon; L Stryer; M Ikura
Journal:  Nature       Date:  1997-09-11       Impact factor: 49.962

6.  Ca(2+)-regulated structural changes in troponin.

Authors:  Maia V Vinogradova; Deborah B Stone; Galina G Malanina; Christina Karatzaferi; Roger Cooke; Robert A Mendelson; Robert J Fletterick
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-22       Impact factor: 11.205

7.  The GTPase dMiro is required for axonal transport of mitochondria to Drosophila synapses.

Authors:  Xiufang Guo; Greg T Macleod; Andrea Wellington; Fangle Hu; Sarvari Panchumarthi; Miriam Schoenfield; Leo Marin; Milton P Charlton; Harold L Atwood; Konrad E Zinsmaier
Journal:  Neuron       Date:  2005-08-04       Impact factor: 17.173

8.  Structure of the regulatory domain of scallop myosin at 2 A resolution: implications for regulation.

Authors:  A Houdusse; C Cohen
Journal:  Structure       Date:  1996-01-15       Impact factor: 5.006

9.  Sequestration of the membrane-targeting myristoyl group of recoverin in the calcium-free state.

Authors:  T Tanaka; J B Ames; T S Harvey; L Stryer; M Ikura
Journal:  Nature       Date:  1995-08-03       Impact factor: 49.962

10.  Yeast Miro GTPase, Gem1p, regulates mitochondrial morphology via a novel pathway.

Authors:  Rebecca L Frederick; J Michael McCaffery; Kyle W Cunningham; Koji Okamoto; Janet M Shaw
Journal:  J Cell Biol       Date:  2004-10-11       Impact factor: 10.539

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  35 in total

1.  Vibrio cholerae T3SS effector VopE modulates mitochondrial dynamics and innate immune signaling by targeting Miro GTPases.

Authors:  Masato Suzuki; Olga Danilchanka; John J Mekalanos
Journal:  Cell Host Microbe       Date:  2014-10-23       Impact factor: 21.023

2.  UbMES and UbFluor: Novel probes for ring-between-ring (RBR) E3 ubiquitin ligase PARKIN.

Authors:  Sungjin Park; Peter K Foote; David T Krist; Sarah E Rice; Alexander V Statsyuk
Journal:  J Biol Chem       Date:  2017-07-14       Impact factor: 5.157

3.  Monitoring PARKIN RBR Ubiquitin Ligase Activation States with UbFluor.

Authors:  Peter K Foote; Alexander V Statsyuk
Journal:  Curr Protoc Chem Biol       Date:  2018-07-31

4.  Insight into human Miro1/2 domain organization based on the structure of its N-terminal GTPase.

Authors:  Kyle P Smith; Pamela J Focia; Srinivas Chakravarthy; Eric C Landahl; Julian L Klosowiak; Sarah E Rice; Douglas M Freymann
Journal:  J Struct Biol       Date:  2020-10-24       Impact factor: 2.867

5.  Miro's N-terminal GTPase domain is required for transport of mitochondria into axons and dendrites.

Authors:  Milos Babic; Gary J Russo; Andrea J Wellington; Ryan M Sangston; Migdalia Gonzalez; Konrad E Zinsmaier
Journal:  J Neurosci       Date:  2015-04-08       Impact factor: 6.167

Review 6.  Proteolytic regulation of mitochondrial dynamics.

Authors:  Jonathan V Dietz; Iryna Bohovych; Martonio Ponte Viana; Oleh Khalimonchuk
Journal:  Mitochondrion       Date:  2019-04-25       Impact factor: 4.160

Review 7.  Miro: A molecular switch at the center of mitochondrial regulation.

Authors:  Emily L Eberhardt; Anthony V Ludlam; Zhenyu Tan; Michael A Cianfrocco
Journal:  Protein Sci       Date:  2020-02-24       Impact factor: 6.725

8.  Crystal structure and calcium-induced conformational changes of diacylglycerol kinase α EF-hand domains.

Authors:  Daisuke Takahashi; Kano Suzuki; Taiichi Sakamoto; Takeo Iwamoto; Takeshi Murata; Fumio Sakane
Journal:  Protein Sci       Date:  2019-02-04       Impact factor: 6.725

Review 9.  Reliance of ER-mitochondrial calcium signaling on mitochondrial EF-hand Ca2+ binding proteins: Miros, MICUs, LETM1 and solute carriers.

Authors:  György Hajnóczky; David Booth; György Csordás; Valentina Debattisti; Tünde Golenár; Shamim Naghdi; Nima Niknejad; Melanie Paillard; Erin L Seifert; David Weaver
Journal:  Curr Opin Cell Biol       Date:  2014-07-10       Impact factor: 8.382

10.  Miro phosphorylation sites regulate Parkin recruitment and mitochondrial motility.

Authors:  Evgeny Shlevkov; Tal Kramer; Jason Schapansky; Matthew J LaVoie; Thomas L Schwarz
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-27       Impact factor: 11.205

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