| Literature DB >> 24066292 |
Abstract
Several candidate genes have been so far implicated in the pathogenesis of proliferative diabetic retinopathy (PDR) in subjects with type 2 diabetes. Since the principal pathogenetic mechanisms for diabetic retinopathy (DR) and PDR are different, the main pathogenetic mechanism in DR is increased vascular permeability, whereas in PDR the crucial pathogenetic mechanisms are fibrosis and neoangiogenesis. Due to that fact, different candidate genes are expected to be involved in the development of either DR or PDR. None of the candidate genes, however, can be fully and solely responsible for the development of PDR and for DR progression into PDR. Epigenetic mechanisms are expected to be involved in the pathogenesis of PDR as well. Gene polymorphisms responsible for PDR and epigenetic mechanisms responsible for PDR are reviewed in this paper.Entities:
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Year: 2013 PMID: 24066292 PMCID: PMC3771247 DOI: 10.1155/2013/540416
Source DB: PubMed Journal: Biomed Res Int Impact factor: 3.411
The reported studies of polymorphisms of genes of oxidative stress and proliferative diabetic retinopathy in subjects with type 2 diabetes.
| Population | Subjects with type 2 diabetes ( | Polymorphism (rs) | Risk genotype/allele | OR ( | Reference |
|---|---|---|---|---|---|
| Caucasian-Brazilians | 501 (PDR versus NDR versus dm without DR) | UCP22: −866G/A3; Ala55Val4; 45 bp Ins/Del5 | Haplotype A Val Ins | 2.12 (0.006) | [ |
| Slovene population (Caucasians) | 577 (PDR versus dm without PDR) | eNOS 4a/4b; eNOS6 894G>T3 eNOS6 | aa; none | 2.9 (=0.005); no association | [ |
| Chinese population | 8111 (PDR versus NDR versus dm without DR) | eNOS6 4a/4b; eNOS 894G>T7 eNOS; T −786C eNOS8 | No association (4a/b; 894G>T); 786C—antirisk | No association (4a/b; 894G>T); 786C—antirisk | [ |
| Caucasian-Brazilians | 630 (PDR versus NDR versus dm without DR) | eNOS2 4a/4b; eNOS2 894G>T3 eNOS2; T −786C eNOS3 | No association | No association | [ |
1Odds ratio and P value in logistic regression analysis; 2uncoupling protein 2; 3866G/A (rs659366); 4Ala55Val (rs660339); 5insertion/deletion (Ins/Del) polymorphism; 6endothelial nitric oxide synthase; 7894G>T (Glu298Asp).
Pathways and genes implicated in the pathogenesis of PDR.
| Pathway/systems | Gene |
|---|---|
| Growth factors | Vascular endothelial growth factor |
| Basic fibroblast growth factor | |
| Insulin-like growth factor | |
|
| |
| Oxidative system | Manganese superoxide dismutase |
| Catalase myeloperoxidase | |
| Glutathione S-transferase | |
| NADPH oxidase | |
| Endothelial nitric oxide synthase | |
| Inducible nitric oxide synthase | |
|
| |
| Inflammatory genes | Interleukins |
| Tumor necrosis factor | |
|
| |
| Adhesion molecules | Intercellular adhesion molecule |
| Vascular cell adhesion protein | |
| Platelet endothelial cell adhesion molecule | |
|
| |
| Polyol pathway | Aldose reductase/sorbitol dehydrogenase |
|
| |
| Renin-angiotensin system | Renin |
| Angiotensinogen | |
| Angiotensin 1 converting enzyme | |
| Aldosterone | |
|
| |
| Advanced glycation end products | Receptor for advanced glycation end products |
|
| |
| Peroxisome proliferator-activated receptor | Peroxisome proliferator-activated receptor |
| Coactivator for peroxisome proliferator-activated receptor | |
|
| |
| Thrombotic system | Fibrinogen |
|
| |
| Platelet function | Integrin |
|
| |
| Extracellular matrix homeostasis | Matrix homeostasis genes |
| Matrix metalloproteinase | |
|
| |
| Hormones/vitamins | Growth hormone |
| Vitamin D | |
|
| |
| Undefined | Glucose transporter-1 |
| Growth hormone | |
The reported studies of growth factor genes and proliferative diabetic retinopathy in subjects with type 2 diabetes.
| Population | Subjects with type 2 diabetes ( | Polymorphism (rs) | Risk genotype/allele | OR ( | Reference |
|---|---|---|---|---|---|
| Japanese population | 536 (PDR versus NDR dm without DR) | VEGF2 −634C/G | CC—no association | 1.5 (0.08) | [ |
| Slovak population (Caucasians) | 245 (PDR versus dm without PDR) | TGF-beta3 +915G/C (R25P) | RR genotype | 2.89 (<0.01) | [ |
| English population (Caucasians) | 267 (PDR versus non-PDR) | VEGF2 −460C/T, VEGF2 +405C/G | CC; no association | 3.7 (0.02) | [ |
| Indian population | 208 (PDR versus non-PDR) | IGF5-(CA) | 18-(AC) repeats | 2.8 (<0.05) | [ |
| Slovak population (Caucasians) | 488 (PDR versus non-PDR versus dm without DR) | bFGF6 −754C/G | CC | NA4 (0.006) | [ |
| Slovene population (Caucasians) | 349 (PDR versus dm without DR) | VEGF2 −634C/G | CC—no association | 1.1 (0.7) | [ |
| Polish population (Caucasians) | 215 (PDR versus non-PDR versus dm without DR) | VEGF2 −634C/G, VEGF2 +460C/T | No association | NA4 | [ |
| Slovene population (Caucasians) | 313 (PDR versus dm without DR) | bFGF6: −553T/A, −834T/A, −921C/G | −553T/A AT genotype; | 2.0 (0.03); | [ |
| South Korean population | 398 (PDR versus non-PDR versus dm without DR) | VEGF2 −936C/T | TT | NA4 | [ |
| Australian population | 364 (PDR versus non-PDR versus dm without DR) | VEGF2—rs3025021 and rs10434, consecutively | C allele rs3025021 | 3.8 (0.002) | [ |
| Japanese population | 364 (PDR versus dm without DR) | VEGF2 −634C/G; −2578C/A | No association; AA genotype | No association; | [ |
| Han Chinese population | 285 (PDR versus non-PDR versus dm without DR) | VEGF2 −634C/G | No association | NA4 (0.6) | [ |
| South Korean population | 387 (PDR versus non-PDR versus dm without DR) | rs699947, rs1570360, and rs2010963—VEGF2 | AGG haplotype | 4.3 ( | [ |
| Iranian population | 398 (PDR versus NDR) | VEGF2 +405 | GG | 1.87 ( | [ |
1Odds ratio and P value in logistic regression analysis; 2vascular endothelial growth factor; 3transforming growth factor-beta; 4not available; 5cytosine-adenine (CA)( repeat in the promoter of the insulin-like growth factor (IGF) gene; 6basic fibroblast growth factor.
The reported studies of the genes involved in iron metabolism and proliferative diabetic retinopathy in subjects with type 2 diabetes.
| Population | Subjects with type 2 diabetes ( | Polymorphism (rs) | Risk genotype/allele | OR ( | Reference |
|---|---|---|---|---|---|
| Slovene population (Caucasians) | 223 (PDR versus dm without PDR) | C282Y-HFE2; H63D-HFE2 | C282Y heterozygosity; no association | 3.0 (0.02); | [ |
| USA study3 | 2052 (PDR versus NDR versus dm without DR) | EPO4 promoter-rs1617640 | T allele | 2.0 (<0.001) | [ |
| Australian5 population | 345 (PDR versus NDR versus dm without DR) | EPO4-rs507392; rs1617640; rs551238 | CC/GG/CC; consecutively | <0.008; <0.008; <0.008; consecutively | [ |
1Odds ratio and P value in logistic regression analysis; 2hemochromatosis gene; 3three European-American cohorts (Utah; GoKinD Study; and Boston). 4Erythropoietin gene; 5ninety-three percent were Caucasians of European descent, 7% were of Asian and Middle Eastern descent.
The reported studies of polymorphisms of the cytokines genes and proliferative diabetic retinopathy in subjects with type 2 diabetes.
| Population | Subjects with type 2 diabetes ( | Polymorphism (rs) | Risk genotype/allele | OR ( | Reference |
|---|---|---|---|---|---|
| Slovak population (Caucasians) | 246 (PDR versus dm without PDR) | TNF2- |
| NA (<0.01) | [ |
| Asian Indian population | 207 (PDR versus dm without DR) | TNF2 (GT) | Allele 8 (111 bp) | NA (<0.01) | [ |
| Japanese population | 251 (PDR versus NDR versus dm without DR) | LTA4 −804C/A, 252A/G; TNF2
| Genotype distribution | No association | [ |
| Indian population | 493 (PDR versus dm without DR) | IL5-10 1082G allele; TNF2
| GG genotype; AA genotype | 2.2 (0.0037); 5.8 (0.001) | [ |
| Korean population | 590 (PDR versus dm without PDR) | MCP-16
| AA genotype | 1.9 (0.009) | [ |
1Odds ratio and P value in logistic regression analysis; 2tumor necrosis factor; 3(GT)n microsatellite dinucleotide repeat upstream to the promoter region of TNF gene; lymphotoxin α −804C/A polymorphism in exon 3 and 252A/G polymorphism in intron 1; 5interleukin; 6monocyte chemoattractant protein-1.
The reported studies of adhesion molecules (ICAM, PECAM, VCAM) and proliferative diabetic retinopathy in subjects with type 2 diabetes.
| Population | Subjects with type 2 diabetes ( | Polymorphism (rs) | Risk genotype/allele | OR ( | Reference |
|---|---|---|---|---|---|
| Chinese population | 172 (PDR versus NDR versus dm without DR) | ICAM-12-K469E | K allele; | NA (0.01); | [ |
| Slovene population (Caucasians) | 338 (PDR versus dm without DR) | ICAM-12-K469E | EE; | 2.0 (0.01); | [ |
1Odds ratio and P value in logistic regression analysis; 2intracellular adhesion molecule-1.
The reported studies of polyol pathway (aldose reductase/sorbitol dehydrogenase) genes and proliferative diabetic retinopathy in subjects with type 2 diabetes.
| Population | Subjects with type 2 diabetes ( | Polymorphism (rs) | Risk genotype/allele | OR ( | Reference |
|---|---|---|---|---|---|
| Japanese population | 61 (PDR versus nonPDR) | AR2 (AC) | z-4 | [ | |
| Brazilian population | 579 (PDR versus non-PDR) | −106C>T AR2 | CC | 2.04 ( | [ |
| Poland (Caucasians) | 215 (PDR versus non-PDR versus dm without DR) | −SDH3 C −1214G (rs2055858) and G −888C (rs3759890) | None | — | [ |
1Odds ratio and P value in logistic regression analysis; 2aldose reductase; 3sorbitol dehydrogenase.
The reported studies of the renin-angiotensin system and proliferative diabetic retinopathy in subjects with type 2 diabetes.
| Population | Subjects with type 2 diabetes ( | Polymorphism (rs) | Risk genotype/allele | OR ( | Reference |
|---|---|---|---|---|---|
| Danish population (Caucasians) | 222 (PDR versus dm without DR) | ACE I/D2 | DD—no association | 1.2 (0.4) | [ |
| Slovene population (Caucasians) | 204 (PDR versus NDR versus dm without DR) | ACE I/D2 | DD—no association | 1.2 (0.4) | [ |
| Chinese population | 4385 (PDR versus NDR versus dm without DR) | ACE I/D2 | DD—no association | NA | [ |
| Chinese population | 2224 (PDR versus dm without DR) | ACE I/D2 | DD | 2.2 (<0.01) | [ |
1Odds ratio and P value in logistic regression analysis; 2insertion/deletion polymorphism of the angiotensin I-converting enzyme gene.