Literature DB >> 24058243

The elastic properties of single double-stranded DNA chains of different lengths as measured with optical tweezers.

M Salomo1, K Kegler, C Gutsche, M Struhalla, J Reinmuth, W Skokow, U Hahn, F Kremer.   

Abstract

Optical tweezers are microscopic tools with extraordinary precision in the determination of the position (±2 nm) of a colloid (diameter: ∼2.0 μm) in 3D-space and in the measurement of small forces in the range between 0.1 and 100 pN (pN=10-12 N). Experiments are reported in which single double-stranded (ds)-DNA chains of different length [2,000 base pairs (bp), 3,000, 4,000, and 6,000 bp] are spanned between two colloidal particles by use of appropriate molecular linkers. For the forces applied (≤40 pN) a fully reversible and well reproducible force-extension dependence is found. The data can be well described by both the worm-like chain model or by an approach developed by R. G. Winkler. For the resulting persistence length, a pronounced dependence on the ionic concentration in the surrounding medium is found.

Entities:  

Keywords:  Optical tweezers; Single polymers; Stretching

Year:  2006        PMID: 24058243      PMCID: PMC3776250          DOI: 10.1007/s00396-006-1517-4

Source DB:  PubMed          Journal:  Colloid Polym Sci        ISSN: 0303-402X            Impact factor:   1.931


  11 in total

1.  Unfolding individual nucleosomes by stretching single chromatin fibers with optical tweezers.

Authors:  M L Bennink; S H Leuba; G H Leno; J Zlatanova; B G de Grooth; J Greve
Journal:  Nat Struct Biol       Date:  2001-07

2.  Stretching DNA with optical tweezers.

Authors:  M D Wang; H Yin; R Landick; J Gelles; S M Block
Journal:  Biophys J       Date:  1997-03       Impact factor: 4.033

Review 3.  A revolution in optical manipulation.

Authors:  David G Grier
Journal:  Nature       Date:  2003-08-14       Impact factor: 49.962

4.  Microscopic measurement of the pair interaction potential of charge-stabilized colloid.

Authors: 
Journal:  Phys Rev Lett       Date:  1994-07-11       Impact factor: 9.161

5.  Force and velocity measured for single molecules of RNA polymerase.

Authors:  M D Wang; M J Schnitzer; H Yin; R Landick; J Gelles; S M Block
Journal:  Science       Date:  1998-10-30       Impact factor: 47.728

6.  Overstretching B-DNA: the elastic response of individual double-stranded and single-stranded DNA molecules.

Authors:  S B Smith; Y Cui; C Bustamante
Journal:  Science       Date:  1996-02-09       Impact factor: 47.728

7.  Ionic effects on the elasticity of single DNA molecules.

Authors:  C G Baumann; S B Smith; V A Bloomfield; C Bustamante
Journal:  Proc Natl Acad Sci U S A       Date:  1997-06-10       Impact factor: 11.205

8.  Covalently Bound Antibody on Polystyrene Latex Beads: Formation, Stability, and Use in Analyses of White Blood Cell Populations.

Authors:  Olavi Siiman; Alexander Burshteyn; Maria Elena Insausti
Journal:  J Colloid Interface Sci       Date:  2001-02-01       Impact factor: 8.128

9.  The preparation of latex particles with covalently bound polyamines, IgG and measles agglutinins and their use in visual agglutination tests.

Authors:  G Quash; A M Roch; A Niveleau; J Grange; T Keolouangkhot; J Huppert
Journal:  J Immunol Methods       Date:  1978       Impact factor: 2.303

10.  The bacteriophage straight phi29 portal motor can package DNA against a large internal force.

Authors:  D E Smith; S J Tans; S B Smith; S Grimes; D L Anderson; C Bustamante
Journal:  Nature       Date:  2001-10-18       Impact factor: 49.962

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  2 in total

1.  DNA condensation by TmHU studied by optical tweezers, AFM and molecular dynamics simulations.

Authors:  Carolin Wagner; Carsten Olbrich; Hergen Brutzer; Mathias Salomo; Ulrich Kleinekathöfer; Ulrich F Keyser; Friedrich Kremer
Journal:  J Biol Phys       Date:  2010-10-09       Impact factor: 1.365

2.  Optical tweezers to study single protein A/immunoglobulin G interactions at varying conditions.

Authors:  Mathias Salomo; Ulrich F Keyser; Marc Struhalla; Friedrich Kremer
Journal:  Eur Biophys J       Date:  2008-04-01       Impact factor: 1.733

  2 in total

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