Literature DB >> 24056342

End-to-end conformational communication through a synthetic purinergic receptor by ligand-induced helicity switching.

Robert A Brown1, Vincent Diemer, Simon J Webb, Jonathan Clayden.   

Abstract

The long-range communication of information, exemplified by signal transduction through membrane-bound receptors, is a central biochemical function. Reversible binding of a messenger ligand induces a local conformational change that is relayed through the receptor, inducing a chemical effect typically several nanometres from the binding site. We report a synthetic receptor mimic that transmits structural information from a boron-based ligand binding site to a spectroscopic reporter located more than 2 nm away. Reversible binding of a diol ligand to the N-terminal binding site induces a screw-sense preference in a helical oligo(aminoisobutyric acid) foldamer, which is relayed to a reporter group at the remote C-terminus, communicating information about the structure and stereochemistry of the ligand. The reversible nature of boronate esterification was exploited to switch the receptor sequentially between left- and right-handed helices, while the exquisite conformational sensitivity of the helical relay allowed the reporter to differentiate even between purine and pyrimidine nucleosides as ligands.

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Year:  2013        PMID: 24056342     DOI: 10.1038/nchem.1747

Source DB:  PubMed          Journal:  Nat Chem        ISSN: 1755-4330            Impact factor:   24.427


  39 in total

Review 1.  Molecular recognition of DNA by small molecules.

Authors:  P B Dervan
Journal:  Bioorg Med Chem       Date:  2001-09       Impact factor: 3.641

2.  Synthetic helical polymers: conformation and function.

Authors:  T Nakano; Y Okamoto
Journal:  Chem Rev       Date:  2001-12       Impact factor: 60.622

3.  pK(a) values and geometries of secondary and tertiary amines complexed to boronic acids-implications for sensor design.

Authors:  S L Wiskur; J J Lavigne; H Ait-Haddou; V Lynch; Y H Chiu; J W Canary; E V Anslyn
Journal:  Org Lett       Date:  2001-05-03       Impact factor: 6.005

4.  Nanometer-range communication of stereochemical information by reversible switching of molecular helicity.

Authors:  Jordi Solà; Stephen P Fletcher; Alejandro Castellanos; Jonathan Clayden
Journal:  Angew Chem Int Ed Engl       Date:  2010-09-10       Impact factor: 15.336

5.  Chiral induction in quinoline-derived oligoamide foldamers: assignment of helical handedness and role of steric effects.

Authors:  Christel Dolain; Hua Jiang; Jean-Michel Léger; Philippe Guionneau; Ivan Huc
Journal:  J Am Chem Soc       Date:  2005-09-21       Impact factor: 15.419

6.  Molecular transmission: controlling the twist sense of a helical polymer with a single light-driven molecular motor.

Authors:  Dirk Pijper; Ben L Feringa
Journal:  Angew Chem Int Ed Engl       Date:  2007       Impact factor: 15.336

7.  Time-programmed peptide helix inversion of a synthetic metal complex triggered by an achiral NO3- anion.

Authors:  Hiroyuki Miyake; Hiroshi Kamon; Ikuko Miyahara; Hideki Sugimoto; Hiroshi Tsukube
Journal:  J Am Chem Soc       Date:  2008-01-23       Impact factor: 15.419

8.  Chemical communication: conductors and insulators of screw-sense preference between helical oligo(aminoisobutyric acid) domains.

Authors:  Thomas Boddaert; Jordi Solà; Madeleine Helliwell; Jonathan Clayden
Journal:  Chem Commun (Camb)       Date:  2012-02-23       Impact factor: 6.222

Review 9.  Coordination chemistry strategies for dynamic helicates: time-programmable chirality switching with labile and inert metal helicates.

Authors:  Hiroyuki Miyake; Hiroshi Tsukube
Journal:  Chem Soc Rev       Date:  2012-08-01       Impact factor: 54.564

10.  Transfer of noncovalent chiral information along an optically inactive helical peptide chain: allosteric control of asymmetry of the C-terminal site by external molecule that binds to the N-terminal site.

Authors:  Naoki Ousaka; Yoshihito Inai
Journal:  J Org Chem       Date:  2009-02-20       Impact factor: 4.354

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  23 in total

Review 1.  Artificial Molecular Machines.

Authors:  Sundus Erbas-Cakmak; David A Leigh; Charlie T McTernan; Alina L Nussbaumer
Journal:  Chem Rev       Date:  2015-09-08       Impact factor: 60.622

2.  An artificial molecular pump.

Authors:  Chuyang Cheng; Paul R McGonigal; Severin T Schneebeli; Hao Li; Nicolaas A Vermeulen; Chenfeng Ke; J Fraser Stoddart
Journal:  Nat Nanotechnol       Date:  2015-05-18       Impact factor: 39.213

3.  Dynamic control of chirality and self-assembly of double-stranded helicates with light.

Authors:  Depeng Zhao; Thomas van Leeuwen; Jinling Cheng; Ben L Feringa
Journal:  Nat Chem       Date:  2016-11-07       Impact factor: 24.427

4.  Hierarchical communication of chirality for aromatic oligoamide sequences.

Authors:  Jiajia Zhang; Dan Luo; Chunmiao Ma; Lu Huang; Quan Gan
Journal:  Nat Commun       Date:  2021-05-11       Impact factor: 14.919

5.  Length-Dependent Formation of Transmembrane Pores by 310-Helical α-Aminoisobutyric Acid Foldamers.

Authors:  Jennifer E Jones; Vincent Diemer; Catherine Adam; James Raftery; Rebecca E Ruscoe; Jason T Sengel; Mark I Wallace; Antoine Bader; Scott L Cockroft; Jonathan Clayden; Simon J Webb
Journal:  J Am Chem Soc       Date:  2016-01-08       Impact factor: 15.419

6.  Modulation of polypeptide conformation through donor-acceptor transformation of side-chain hydrogen bonding ligands.

Authors:  Ziyuan Song; Rachael A Mansbach; Hua He; Kuo-Chih Shih; Ryan Baumgartner; Nan Zheng; Xiaochu Ba; Yinzhao Huang; Deepak Mani; Yun Liu; Yao Lin; Mu-Ping Nieh; Andrew L Ferguson; Lichen Yin; Jianjun Cheng
Journal:  Nat Commun       Date:  2017-07-21       Impact factor: 14.919

7.  Strong Short-Range Cooperativity in Hydrogen-Bond Chains.

Authors:  Nicholas Dominelli-Whiteley; James J Brown; Kamila B Muchowska; Ioulia K Mati; Catherine Adam; Thomas A Hubbard; Alex Elmi; Alisdair J Brown; Ian A W Bell; Scott L Cockroft
Journal:  Angew Chem Int Ed Engl       Date:  2017-06-01       Impact factor: 15.336

8.  A tendril perversion in a helical oligomer: trapping and characterizing a mobile screw-sense reversal.

Authors:  Michael Tomsett; Irene Maffucci; Bryden A F Le Bailly; Liam Byrne; Stefan M Bijvoets; M Giovanna Lizio; James Raftery; Craig P Butts; Simon J Webb; Alessandro Contini; Jonathan Clayden
Journal:  Chem Sci       Date:  2017-01-25       Impact factor: 9.825

9.  Conformational Switching of a Foldamer in a Multicomponent System by pH-Filtered Selection between Competing Noncovalent Interactions.

Authors:  Julien Brioche; Sarah J Pike; Sofja Tshepelevitsh; Ivo Leito; Gareth A Morris; Simon J Webb; Jonathan Clayden
Journal:  J Am Chem Soc       Date:  2015-05-14       Impact factor: 15.419

10.  High conductance values in π-folded molecular junctions.

Authors:  Marco Carini; Marta P Ruiz; Imanol Usabiaga; José A Fernández; Emilio J Cocinero; Manuel Melle-Franco; Ismael Diez-Perez; Aurelio Mateo-Alonso
Journal:  Nat Commun       Date:  2017-05-18       Impact factor: 14.919

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