Literature DB >> 24053455

Infrared metrics for fixation-free liver tumor detection.

Zhaomin Chen1, Ryan Butke, Barrie Miller, Charles L Hitchcock, Heather C Allen, Stephen P Povoski, Edward W Martin, James V Coe.   

Abstract

Infrared (IR) spectroscopic imaging of human liver tissue slices has been used to identify and characterize liver tumors. Liver tissue, containing a liver metastasis of breast origin (mucinous carcinoma), was surgically removed from a consenting patient and frozen without formalin fixation or dehydration procedures, so that lipids and water remained in the tissues. A set of IR metrics (ratios of various IR peaks) was determined for tumors in fixation-free liver tissues. K-means cluster analysis was used to tell tumor from nontumor. In this case, there was a large reduction in lipid content upon going from nontumor to tumor tissue, and a well-resolved IR spectrum of nontumor liver lipid was obtained and analyzed. These IR metrics may someday guide work on IR spectroscopic diagnostics on patients in the operating room. This work also suggests utility for these methods beyond the identification of liver tumors, perhaps in the study of liver lipids.

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Year:  2013        PMID: 24053455      PMCID: PMC3875153          DOI: 10.1021/jp4073087

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  22 in total

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Authors:  S Boydston-White; T Gopen; S Houser; J Bargonetti; M Diem
Journal:  Biospectroscopy       Date:  1999

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Journal:  Biopolymers       Date:  2000       Impact factor: 2.505

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Authors:  Melissa Romeo; Christian Matthäus; Milos Miljkovic; Max Diem
Journal:  Biopolymers       Date:  2004 May-Jun 5       Impact factor: 2.505

4.  Fourier transform infrared (FTIR) spectral mapping of the cervical transformation zone, and dysplastic squamous epithelium.

Authors:  B R Wood; L Chiriboga; H Yee; M A Quinn; D McNaughton; M Diem
Journal:  Gynecol Oncol       Date:  2004-04       Impact factor: 5.482

5.  Infrared spectroscopic imaging for histopathologic recognition.

Authors:  Daniel C Fernandez; Rohit Bhargava; Stephen M Hewitt; Ira W Levin
Journal:  Nat Biotechnol       Date:  2005-03-27       Impact factor: 54.908

6.  Protein secondary structures in water from second-derivative amide I infrared spectra.

Authors:  A Dong; P Huang; W S Caughey
Journal:  Biochemistry       Date:  1990-04-03       Impact factor: 3.162

7.  Examination of the secondary structure of proteins by deconvolved FTIR spectra.

Authors:  D M Byler; H Susi
Journal:  Biopolymers       Date:  1986-03       Impact factor: 2.505

8.  Isolation and determination of cholesterol glucuronide in human liver.

Authors:  A Hara; T Taketomi
Journal:  Lipids       Date:  1982-08       Impact factor: 1.880

9.  Structural characterization of membrane proteins and peptides by FTIR and ATR-FTIR spectroscopy.

Authors:  Suren A Tatulian
Journal:  Methods Mol Biol       Date:  2013

10.  Distinctive infrared spectral features in liver tumor tissues of mice: evidence of structural modifications at the molecular level.

Authors:  P T Wong; M Cadrin; S W French
Journal:  Exp Mol Pathol       Date:  1991-12       Impact factor: 3.362

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