| Literature DB >> 24052609 |
Manuel Fernández-Martínez1, Xabier Elcoroaristizabal Martín, Elisa Blanco Martín, Luis Galdos Alcelay, Iratxe Ugarriza Serrano, Fernando Gómez Busto, Maite Alvarez-Álvarez, Ana Molano Salazar, Rocio Bereincua Gandarias, Sandra Inglés Borda, Juan María Uterga Valiente, Begoña Indakoetxea Juanbeltz, María Ángeles Gómez Beldarraín, Josefa Moraza López, Myriam Barandiarán Amillano, Marian M de Pancorbo.
Abstract
OBJECTIVES: Examine the role of single nucleotide polymorphisms (SNPs) in the oestrogen receptor (ER) genes: rs9340799, rs2234693, rs2228480 (in the ESR1 gene) and rs4986938 (in the ESR2 gene) as a risk factor for amnesic mild cognitive impairment (MCIa) and Alzheimer's disease (AD) and its possible association with the apolipoprotein E (APOE) gene.Entities:
Keywords: GENETICS
Year: 2013 PMID: 24052609 PMCID: PMC3780298 DOI: 10.1136/bmjopen-2013-003200
Source DB: PubMed Journal: BMJ Open ISSN: 2044-6055 Impact factor: 2.692
Baseline demographic
| Group | n | Age* | Women (%)† | MMSE‡ | Education§ |
|---|---|---|---|---|---|
| MCIa | 204 | 70.25±8.6 | 61.3 | 26.38±2.05 | 8.08±4.36 |
| AD | 350 | 72.17±8.3 | 71.1 | 19.68±4.60 | 8.41±7.90 |
| CONTROLS | 262 | 74.00±9.6 | 59.5 | 28.45±1.63 | 9.51±4.80 |
*Years, mean±SD.
†Per cent of women in group.
‡MMSE score, mean±SD.
§Years of education.
Allelic and genotypic frequency
| XbaI | MCIa (N=204) | AD (N=350) | CONTROLS (N=262) |
|---|---|---|---|
| Allele | |||
| X | 0.426 | 0.409 | 0.395 |
| x | 0.574 | 0.591 | 0.605 |
| Genotype | |||
| XX | 0.157 | 0.154 | 0.156 |
| Xx | 0.539 | 0.509 | 0.477 |
| xx | 0.304 | 0.337 | 0.366 |
| H-W* | |||
| p Value | 0.197 | 0.376 | 1.000 |
| Allele | |||
| P | 0.488 | 0.480 | 0.462 |
| p | 0.512 | 0.520 | 0.538 |
| Genotype | |||
| PP | 0.225 | 0.209 | 0.214 |
| Pp | 0.525 | 0.543 | 0.496 |
| pp | 0.250 | 0.249 | 0.290 |
| H-W* | |||
| p Value | 0.575 | 0.110 | 1.000 |
| Allele | |||
| A | 0.191 | 0.189 | 0.174 |
| G | 0.809 | 0.811 | 0.826 |
| Genotype | |||
| AA | 0.039 | 0.037 | 0.030 |
| AG | 0.304 | 0.303 | 0.286 |
| GG | 0.657 | 0.660 | 0.684 |
| H-W* | |||
| p Value | 0.818 | 0.861 | 1.000 |
| Allele | |||
| A | 0.424 | 0.419 | 0.378 |
| G | 0.576 | 0.581 | 0.622 |
| Genotype | |||
| AA | 0.201 | 0.189 | 0.133 |
| AG | 0.446 | 0.460 | 0.489 |
| GG | 0.353 | 0.351 | 0.378 |
| H-W* | |||
| p Value | 0.245 | 0.325 | 0.591 |
| Allele | |||
| 2 | 0.027 | 0.034 | 0.057 |
| 3 | 0.743 | 0.665 | 0.842 |
| 4 | 0.230 | 0.301 | 0.101 |
| Genotype | |||
| 2,2 | 0.000 | 0.000 | 0.008 |
| 2,3 | 0.044 | 0.046 | 0.092 |
| 2,4 | 0.010 | 0.017 | 0.008 |
| 3,3 | 0.574 | 0.434 | 0.698 |
| 3,4 | 0.294 | 0.420 | 0.195 |
| 4,4 | 0.078 | 0.083 | 0.000 |
| H-W* | |||
| 0.217 | 0.814 | 0.102 | |
| XPAA(+) | 0.709 | 0.708 | 0.674 |
| XPAA(−) | 0.291 | 0.292 | 0.326 |
*Hardy-Weinberg probability test
Exact G test
| p Value | SE | p Value | SE | ||
|---|---|---|---|---|---|
| XbaI* | XbaI† | ||||
| MCI vs CTL | 0.339 | 0.006 | MCI vs CTL | 0.336 | 0.004 |
| MCI vs AD | 0.571 | 0.005 | MCI vs AD | 0.564 | 0.004 |
| AD vs CTL | 0.638 | 0.005 | AD vs CTL | 0.635 | 0.004 |
| PvuII* | PvuII† | ||||
| MCI vs CTL | 0.479 | 0.006 | MCI vs CTL | 0.464 | 0.004 |
| MCI vs AD | 0.853 | 0.002 | MCI vs AD | 0.846 | 0.002 |
| AD vs CTL | 0.562 | 0.006 | AD vs CTL | 0.548 | 0.005 |
| SNP1* | SNP1† | ||||
| MCI vs CTL | 0.483 | 0.005 | MCI vs CTL | 0.491 | 0.004 |
| MCI vs AD | 0.935 | 0.002 | MCI vs AD | 0.935 | 0.001 |
| AD vs CTL | 0.532 | 0.011 | AD vs CTL | 0.552 | 0.007 |
| SNP2* | SNP2† | ||||
| MCI vs CTL | 0.180 | 0.009 | MCI vs CTL | 0.153 | 0.005 |
| MCI vs AD | 0.896 | 0.003 | MCI vs AD | 0.904 | 0.003 |
| AD vs CTL | 0.139 | 0.007 | AD vs CTL | 0.173 | 0.009 |
| APOE† | |||||
| MCI vs CTL | 0.000 | <0.001 | MCI vs CTL | 0.000 | <0.001 |
| MCI vs AD | 0.033 | 0.002 | MCI vs AD | 0.033 | 0.002 |
| AD vs CTL | 0.000 | <0.001 | AD vs CTL | 0.000 | <0.001 |
*Allelic frequency.
†Genotypic frequency.
Risk Factors for MCI and AD from Logistic Regression Models
| MCI | AD | |||
|---|---|---|---|---|
| OR CI 95% | p Value | OR CI 95% | p Value | |
| X (+)† | 1.39 (0.93 to 2.06) | 0.104 | 1.18 (0.85 to 1.67) | 0.324 |
| P (+)‡ | 1.25 (0.82 to 1.90) | 0.293 | 1.26 (0.88 to 1.23) | 0.205 |
| SNP1-A§ | 1.14 (0.76 to 1.71) | 0.506 | 1.13 (0.78 to 1.62) | 0.510 |
| SNP2-A¶ | 1.05 (0.71 to 1.54) | 0.304 | 1.08 (0.77 to 1.51) | 0.649 |
| E4 (+) | 2.44 (1.61 to 3.69) | <0.001 | 4.23 (2.93 to 6.12) | <0.001 |
| Women | 1.07 (0.73 to 1.56) | 0.705 | 1.67 (1.19 to 2.35) | 0.003 |
| E4 (+)*Women†† | 2.27 (1.32 to 3.87) | 0.003 | 4.85 (3.04 to 7.73) | <0.001 |
| E4 (+)*Men‡‡ | 2.74 (1.43 to 5.23) | 0.002 | 3.19 (1.73 to 5.88) | <0.001 |
| X (+) E4(−)§§ | 1.04 (0.65 to 1.66) | 0.863 | 1.18 (0.76 to 1.81) | 0.452 |
| P (+) E4(−)§§ | 0.86 (0.52 to 1.40) | 0.545 | 1.19 (0.754 to 1.90) | 0.444 |
| SNP1-A(+)*E4(−)§§ | 1.19 (0.74 to 1.92) | 0.469 | 1.13 (0.73 to 1.76) | 0.568 |
| SNP2-A(+)*E4(−)§§ | 1.03 (0.65 to 1.66) | 0.879 | 1.07 (0.70 to 1.64 | 0.758 |
| E4(+)*X¶¶ | 3.17 (1.80 to 5.59) | <0.001 | 5.07 (3.00 to 8.55) | <0.001 |
| E4(+)*P¶¶ | 2.74 (1.55 to 4.85) | 0.001 | 5.35 (3.11 to 9.17) | <0.001 |
| E4(+)*SNP1-A¶¶ | 2.53 (1.31 to 4.90) | <0.001 | 4.44 (2.48 to 7.93) | <0.001 |
| E4(+)*SNP2-A¶¶ | 2.77 (1.55 to 4.93) | 0.001 | 4.87 (2.91 to 8.17) | <0.001 |
| XPAA*E4(−)*** | 1.31 (0.48 to 3.54) | 0.590 | 1.19 (0.49 to 2.91) | 0.696 |
| XPAA(−)*E4(+)††† | 2.53 (1.61 to 3.93) | <0.001 | 4.32 (2.91 to 6.40) | <0.001 |
| XPAA*E4(+)§§§ | 3.30 (1.28 to 8.54) | 0.014 | 5.16 (2.19 to 12.14) | <0.001 |
| XPAA*E4(+)*Women§§§ | 3.84 (1.09 to 13.57) | 0.036 | 8.04 (2.60 to 24.80) | <0.001 |
| XPAA*E4(+)*Men§§§ | 3.20 (0.73 to 14.11) | 0.124 | 3.57 (0.88 to 14.47) | 0.075 |
†Effect of sample with at least one X of RFLP XbaI.
‡Effect of sample with at least one P of RFLP PvuII.
§Effect of sample with at least one A allele of rs2228480.
¶Effect of sample with at least one A allele of rs4986938.
**Effect of sample with at least one E4 allele of the APOE gene.
††Women selected by at least one E4 allele of the APOE gene.
‡‡Men selected by at least one E4 allele of the APOE gene.
§§Sample selected by at least one allele that is indicated and the absence of the E4 allele of the APOE gene.
¶¶Sample selected by at least one E4 allele of the APOE gene and one of the alleles that is indicated. The reference category was sample control.
***Sample selected by absence of the E4 allele of the APOE gene and the presence of XPAA.
†††Sample selected by absence of XPAA and the presence by at least one E4 allele of the APOE gene. Sample selected by at least one E4 allele of the APOE gene and the presence XPAA.
‡‡‡Sample selected by at least one E4 allele of the APOE gene and the presence of XPAA.
§§§Women or men selected by at least one E4 allele of the APOE gene and the presence of XPAA. * In all models, the reference category was sample control considering the age and sex (as appropriate).