Literature DB >> 24048887

Sequence analysis of infectious pancreatic necrosis virus isolated from Iranian reared rainbow trout (Oncorhynchus mykiss) in 2012.

Maryam Dadar1, Rahim Peyghan, Hamid Rajabi Memari, Masod Reza Seifi Abad Shapouri, Reza Hasanzadeh, Laleh Moazzami Goudarzi, Vikram N Vakharia.   

Abstract

Infectious pancreatic necrosis virus (IPNV) is the causal agent of a highly contagious disease that affects many species of fish and shellfish. This virus causes economically significant diseases of farmed rainbow trout, Oncorhynchus mykiss (Walbaum), in Iran, which is often associated with the transmission of pathogens from European resources. In this study, moribund rainbow trout fry samples were collected during an outbreak of IPNV in three different fish farms in north and west provinces of Iran in 2012; and we investigated the full genome sequence of Iranian IPNV and compared it with previously identified IPNV sequences. The sequences of different structural and nonstructural-protein genes were compared to those of other aquatic birnaviruses sequenced to date. Our results show that the Iranian isolate falls within genogroup 5, serotype A2 strain SP, having 99% identity with the strain 1146 from Spain. These results suggest that the Iranian isolate may have originated from Europe.

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Year:  2013        PMID: 24048887     DOI: 10.1007/s11262-013-0981-4

Source DB:  PubMed          Journal:  Virus Genes        ISSN: 0920-8569            Impact factor:   2.332


  33 in total

1.  Phylogenetic relationships of aquatic birnaviruses based on deduced amino acid sequences of genome segment A cDNA.

Authors:  S Blake; J Y Ma; D A Caporale; S Jairath; B L Nicholson
Journal:  Dis Aquat Organ       Date:  2001-06-20       Impact factor: 1.802

2.  Genetic analysis of aquabirnaviruses isolated from wild fish reveals occurrence of natural reassortment of infectious pancreatic necrosis virus.

Authors:  I Romero-Brey; I Bandín; J M Cutrín; V N Vakharia; C P Dopazo
Journal:  J Fish Dis       Date:  2009-05-20       Impact factor: 2.767

3.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

4.  Characterization of the small open reading frame on genome segment A of infectious pancreatic necrosis virus.

Authors:  J Heppell; E Tarrab; L Berthiaume; J Lecomte; M Arella
Journal:  J Gen Virol       Date:  1995-08       Impact factor: 3.891

5.  Comparison of the immunogenicity of recombinant VP2 and VP3 of infectious pancreatic necrosis virus and marine birnavirus.

Authors:  C H Moon; J W Do; S J Cha; J D Bang; M A Park; D J Yoo; J M Lee; H G Kim; D K Chung; J W Park
Journal:  Arch Virol       Date:  2004-10       Impact factor: 2.574

6.  Synthesis of the infectious pancreatic necrosis virus polyprotein, detection of a virus-encoded protease, and fine structure mapping of genome segment A coding regions.

Authors:  R Duncan; E Nagy; P J Krell; P Dobos
Journal:  J Virol       Date:  1987-12       Impact factor: 5.103

7.  Molecular characterization of Sp serotype strains of infectious pancreatic necrosis virus exhibiting differences in virulence.

Authors:  R B Shivappa; H Song; K Yao; A Aas-Eng; O Evensen; V N Vakharia
Journal:  Dis Aquat Organ       Date:  2004-10-21       Impact factor: 1.802

8.  First isolation of an aquatic birnavirus from farmed and wild fish species in Australia.

Authors:  M S Crane; P Hardy-Smith; L M Williams; A D Hyatt; L M Eaton; A Gould; J Handlinger; J Kattenbelt; N Gudkovs
Journal:  Dis Aquat Organ       Date:  2000-10-25       Impact factor: 1.802

9.  Detection and quantitation of infectious pancreatic necrosis virus by real-time reverse transcriptase-polymerase chain reaction using lethal and non-lethal tissue sampling.

Authors:  Robert M Bowers; Scott E Lapatra; Arun K Dhar
Journal:  J Virol Methods       Date:  2007-11-09       Impact factor: 2.014

10.  Expression of infectious pancreatic necrosis virus polyprotein and VP1 in insect cells and the detection of the polyprotein in purified virus.

Authors:  G Magyar; P Dobos
Journal:  Virology       Date:  1994-02       Impact factor: 3.616

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  4 in total

1.  Complete genomic sequence of an infectious pancreatic necrosis virus isolated from rainbow trout (Oncorhynchus mykiss) in China.

Authors:  Feng Ji; Jing-Zhuang Zhao; Miao Liu; Tong-Yan Lu; Hong-Bai Liu; Jiasheng Yin; Li-Ming Xu
Journal:  Virus Genes       Date:  2016-11-18       Impact factor: 2.332

2.  Molecular characterization of infectious pancreatic necrosis virus strains isolated from the three types of salmonids farmed in Chile.

Authors:  René A Manríquez; Tamara Vera; Melina V Villalba; Alejandra Mancilla; Vikram N Vakharia; Alejandro J Yañez; Juan G Cárcamo
Journal:  Virol J       Date:  2017-01-31       Impact factor: 4.099

Review 3.  The Infectious Pancreatic Necrosis Virus (IPNV) and its Virulence Determinants: What is Known and What Should be Known.

Authors:  Carlos P Dopazo
Journal:  Pathogens       Date:  2020-02-04

4.  Low evolutionary rate of infectious pancreatic necrosis virus (IPNV) in Italy is associated with reduced virulence in trout.

Authors:  Valentina Panzarin; Edward C Holmes; Miriam Abbadi; Gianpiero Zamperin; Rosita Quartesan; Adelaide Milani; Alessia Schivo; Laura Bille; Manuela Dalla Pozza; Isabella Monne; Anna Toffan
Journal:  Virus Evol       Date:  2018-07-18
  4 in total

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