| Literature DB >> 24046721 |
P A Suchetan1, S Sreenivasa, B S Palakshamurthy, T Madhu Chakrapani Rao.
Abstract
The title mol-ecule, C6H7N3O, is almost planar (r.m.s. deviation = 0.0068 Å) and adopts an E conformation about the C=Entities:
Year: 2013 PMID: 24046721 PMCID: PMC3770436 DOI: 10.1107/S1600536813017418
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H7N3O | |
| prism | |
| Monoclinic, | |
| Hall symbol: -C 2yc | Mo |
| Cell parameters from 1088 reflections | |
| θ = 2.0–25.0° | |
| µ = 0.11 mm−1 | |
| β = 105.468 (12)° | |
| Prism, colourless | |
| 0.33 × 0.25 × 0.20 mm |
| Bruker APEXII CCD area-detector diffractometer | 1086 independent reflections |
| Radiation source: fine-focus sealed tube | 982 reflections with |
| Graphite monochromator | |
| Detector resolution: 1.03 pixels mm-1 | θmax = 25.0°, θmin = 2.0° |
| phi and ω scans | |
| Absorption correction: multi-scan ( | |
| 8242 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1086 reflections | (Δ/σ)max = 0.011 |
| 103 parameters | Δρmax = 0.19 e Å−3 |
| 2 restraints | Δρmin = −0.18 e Å−3 |
| 0 constraints |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.19134 (4) | 0.1826 (2) | 0.26040 (7) | 0.0207 (3) | |
| H1N2 | 0.0896 (7) | 0.225 (3) | 0.1797 (12) | 0.027 (4)* | |
| H2N2 | 0.0456 (6) | 0.081 (3) | 0.0861 (11) | 0.027 (4)* | |
| H1 | 0.2316 (9) | 0.260 (4) | 0.2779 (14) | 0.043 (5)* | |
| C1 | 0.12315 (6) | −0.2716 (3) | 0.03188 (9) | 0.0154 (3) | |
| C2 | 0.17439 (6) | −0.4236 (3) | 0.01036 (10) | 0.0189 (3) | |
| H2 | 0.2167 | −0.3964 | 0.0520 | 0.023* | |
| C3 | 0.16144 (6) | −0.6149 (3) | −0.07361 (10) | 0.0208 (3) | |
| H3 | 0.1949 | −0.7164 | −0.0904 | 0.025* | |
| C4 | 0.09770 (6) | −0.6536 (3) | −0.13259 (10) | 0.0211 (3) | |
| H4 | 0.0874 | −0.7834 | −0.1891 | 0.025* | |
| C5 | 0.05004 (6) | −0.4948 (3) | −0.10538 (10) | 0.0203 (3) | |
| H5 | 0.0073 | −0.5229 | −0.1449 | 0.024* | |
| C6 | 0.13390 (5) | −0.0595 (3) | 0.12070 (9) | 0.0147 (3) | |
| N1 | 0.06133 (5) | −0.3023 (2) | −0.02561 (8) | 0.0176 (3) | |
| N2 | 0.08163 (5) | 0.0824 (2) | 0.13540 (9) | 0.0179 (3) | |
| N3 | 0.19228 (5) | −0.0259 (2) | 0.18081 (8) | 0.0175 (3) |
| O1 | 0.0156 (5) | 0.0240 (5) | 0.0199 (5) | −0.0027 (4) | 0.0004 (4) | −0.0070 (4) |
| C1 | 0.0157 (6) | 0.0151 (6) | 0.0149 (6) | −0.0009 (5) | 0.0032 (5) | 0.0048 (5) |
| C2 | 0.0152 (6) | 0.0215 (7) | 0.0186 (6) | 0.0008 (5) | 0.0022 (5) | 0.0038 (5) |
| C3 | 0.0225 (7) | 0.0210 (7) | 0.0205 (7) | 0.0050 (5) | 0.0087 (5) | 0.0035 (5) |
| C4 | 0.0276 (7) | 0.0199 (7) | 0.0157 (6) | 0.0005 (5) | 0.0055 (5) | −0.0008 (5) |
| C5 | 0.0175 (6) | 0.0231 (7) | 0.0173 (6) | −0.0017 (5) | −0.0006 (5) | −0.0008 (5) |
| C6 | 0.0142 (6) | 0.0154 (6) | 0.0141 (6) | 0.0000 (5) | 0.0029 (5) | 0.0046 (5) |
| N1 | 0.0155 (5) | 0.0193 (6) | 0.0162 (5) | −0.0008 (4) | 0.0012 (4) | 0.0004 (4) |
| N2 | 0.0130 (6) | 0.0216 (6) | 0.0162 (6) | 0.0013 (5) | −0.0009 (5) | −0.0031 (5) |
| N3 | 0.0163 (5) | 0.0177 (6) | 0.0169 (5) | −0.0009 (4) | 0.0018 (4) | −0.0017 (4) |
| O1—N3 | 1.4201 (13) | C4—C5 | 1.3773 (18) |
| O1—H1 | 0.903 (18) | C4—H4 | 0.9300 |
| C1—N1 | 1.3407 (16) | C5—N1 | 1.3408 (16) |
| C1—C2 | 1.3918 (17) | C5—H5 | 0.9300 |
| C1—C6 | 1.4878 (17) | C6—N3 | 1.2928 (16) |
| C2—C3 | 1.3765 (18) | C6—N2 | 1.3532 (16) |
| C2—H2 | 0.9300 | N2—H1N2 | 0.862 (13) |
| C3—C4 | 1.3849 (19) | N2—H2N2 | 0.859 (13) |
| C3—H3 | 0.9300 | ||
| N3—O1—H1 | 104.9 (11) | C3—C4—H4 | 120.9 |
| N1—C1—C2 | 123.03 (11) | N1—C5—C4 | 124.19 (12) |
| N1—C1—C6 | 115.35 (10) | N1—C5—H5 | 117.9 |
| C2—C1—C6 | 121.61 (11) | C4—C5—H5 | 117.9 |
| C3—C2—C1 | 118.91 (12) | N3—C6—N2 | 123.75 (11) |
| C3—C2—H2 | 120.5 | N3—C6—C1 | 118.26 (10) |
| C1—C2—H2 | 120.5 | N2—C6—C1 | 117.97 (10) |
| C2—C3—C4 | 118.86 (12) | C1—N1—C5 | 116.69 (10) |
| C2—C3—H3 | 120.6 | C6—N2—H1N2 | 116.3 (10) |
| C4—C3—H3 | 120.6 | C6—N2—H2N2 | 119.9 (10) |
| C5—C4—C3 | 118.28 (12) | H1N2—N2—H2N2 | 118.9 (14) |
| C5—C4—H4 | 120.9 | C6—N3—O1 | 108.89 (9) |
| N1—C1—C2—C3 | −0.07 (18) | N1—C1—C6—N2 | −0.29 (16) |
| C6—C1—C2—C3 | −179.35 (11) | C2—C1—C6—N2 | 179.05 (11) |
| C1—C2—C3—C4 | −1.19 (18) | C2—C1—N1—C5 | 1.51 (17) |
| C2—C3—C4—C5 | 0.96 (18) | C6—C1—N1—C5 | −179.17 (10) |
| C3—C4—C5—N1 | 0.6 (2) | C4—C5—N1—C1 | −1.77 (18) |
| N1—C1—C6—N3 | 178.22 (10) | N2—C6—N3—O1 | −0.96 (16) |
| C2—C1—C6—N3 | −2.45 (17) | C1—C6—N3—O1 | −179.38 (9) |
| H··· | ||||
| O1—H1···N3i | 0.903 (18) | 1.859 (19) | 2.7537 (14) | 170.5 (17) |
| N2—H2 | 0.86 (1) | 2.44 (1) | 3.1753 (16) | 144 (1) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1⋯N3i | 0.903 (18) | 1.859 (19) | 2.7537 (14) | 170.5 (17) |
| N2—H2 | 0.86 (1) | 2.44 (1) | 3.1753 (16) | 144 (1) |
Symmetry codes: (i) ; (ii) .